Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_007464 Vanilla planifolia HOM05D027844 ORTHO05D009855 3.9e-64 248.1 131 100.0
Actinidia00743 Actinidia chinensis HOM05D002055 ORTHO05D002120 7.2e-10 67.8 67 56.7
Os02g0715400 Oryza sativa ssp. japonica HOM05D027844 ORTHO05D037205 7.2e-10 67.8 77 51.9
CSS0012022 Camellia sinensis var. sinensis HOM05D007833 ORTHO05D009855 9.3e-10 67.4 59 52.5
AUR62036454 Chenopodium quinoa HOM05D007833 ORTHO05D009855 2.1e-09 66.2 72 52.8
Hma1.2p1_0628F.1_g192040 Hydrangea macrophylla HOM05D007833 ORTHO05D009855 2.1e-09 66.2 64 53.1
AUR62017101 Chenopodium quinoa HOM05D007833 ORTHO05D009855 3.5e-09 65.5 75 52.0
Rhsim13G0023900 Rhododendron simsii HOM05D007833 ORTHO05D009855 3.5e-09 65.5 47 63.8
MBI04_g33966_MAGBIO Magnolia biondii HOM05D007833 ORTHO05D009855 6.1e-09 64.7 80 47.5
Cc01_g19620 Coffea canephora HOM05D007833 ORTHO05D009855 1.0e-08 63.9 66 47.0
Solyc06g084300.1 Solanum lycopersicum HOM05D007833 ORTHO05D009855 2.3e-08 62.8 57 50.9
FvH4_2g23750 Fragaria vesca HOM05D007833 ORTHO05D009855 5.1e-08 61.6 49 57.1
FAN24G2170 Fragaria x ananassa HOM05D007833 ORTHO05D009855 5.1e-08 61.6 49 57.1
Oeu028084.1 Olea europaea HOM05D007833 ORTHO05D009855 5.1e-08 61.6 55 54.5
CAN.G1682.20 Capsicum annuum HOM05D007833 ORTHO05D009855 6.7e-08 61.2 64 46.9
Nitab4.5_0008797g0010 Nicotiana tabacum HOM05D007833 ORTHO05D009855 8.7e-08 60.8 68 48.5
Sc24g0003060 Simmondsia chinensis HOM05D007833 ORTHO05D009855 1.1e-07 60.5 65 46.2
Nitab4.5_0001028g0100 Nicotiana tabacum HOM05D007833 ORTHO05D009855 1.5e-07 60.1 51 54.9
Dinv11245 Davidia involucrata HOM05D003232 ORTHO05D003584 1.9e-07 59.7 135 31.1
Nitab4.5_0000759g0080 Nicotiana tabacum HOM05D007833 ORTHO05D009855 1.9e-07 59.7 62 46.8
Zm00001eb188980 Zea mays HOM05D027844 ORTHO05D037205 2.5e-07 59.3 85 44.7
Zm00001eb442030 Zea mays HOM05D027844 ORTHO05D037205 2.5e-07 59.3 85 44.7
Sopen06g035690 Solanum pennellii HOM05D007833 ORTHO05D009855 3.3e-07 58.9 60 46.7
FAN20G1309 Fragaria x ananassa HOM05D007833 ORTHO05D009855 4.3e-07 58.5 65 47.7
Prupe.8G242800 Prunus persica HOM05D007833 ORTHO05D009855 5.7e-07 58.2 58 46.6
TAR365G0564 Trochodendron aralioides HOM05D007833 ORTHO05D009855 7.4e-07 57.8 71 45.1
Ciclev10023167m.g Citrus clementina HOM05D007833 ORTHO05D009855 9.7e-07 57.4 45 57.8
Lsat_1_v5_gn_9_4081 Lactuca sativa HOM05D007833 ORTHO05D009855 9.7e-07 57.4 57 47.4
PGSC0003DMG400020049 Solanum tuberosum HOM05D007833 ORTHO05D009855 9.7e-07 57.4 68 45.6
Nitab4.5_0014943g0010 Nicotiana tabacum HOM05D007833 ORTHO05D009855 1.6e-06 56.6 53 52.8
QL12p022146 Quercus lobata HOM05D007833 ORTHO05D009855 1.6e-06 56.6 59 49.2
TWI59G0429 Tripterygium wilfordii HOM05D007833 ORTHO05D009855 1.6e-06 56.6 72 47.2
EL10Ac7g17570 Beta vulgaris HOM05D007833 ORTHO05D009855 2.2e-06 56.2 71 42.3
ECA247G0823 Erigeron canadensis HOM05D007833 ORTHO05D009855 2.2e-06 56.2 62 43.5
Manes.01G208800 Manihot esculenta HOM05D007833 ORTHO05D009855 2.2e-06 56.2 57 47.4
Peaxi162Scf00783g00321 Petunia axillaris HOM05D007833 ORTHO05D009855 2.2e-06 56.2 51 49.0
Phvul.001G149800 Phaseolus vulgaris HOM05D007833 ORTHO05D009855 2.2e-06 56.2 46 56.5
Sp5g09880 Schrenkiella parvula HOM05D007833 ORTHO05D009855 2.2e-06 56.2 49 53.1
PGSC0003DMG400001195 Solanum tuberosum HOM05D007833 ORTHO05D009855 2.2e-06 56.2 51 52.9
vmacro02562 Vaccinium macrocarpon HOM05D007833 ORTHO05D009855 2.2e-06 56.2 61 44.3
CANSAT25G0416 Cannabis sativa HOM05D007833 ORTHO05D009855 2.8e-06 55.8 45 60.0
Medtr7g094710 Medicago truncatula HOM05D007833 ORTHO05D009855 2.8e-06 55.8 63 44.4
Haze_04727 Corylus avellana HOM05D001305 ORTHO05D007147 3.7e-06 55.5 61 49.2
Glyma.19G154700 Glycine max HOM05D007833 ORTHO05D009855 3.7e-06 55.5 46 58.7
TPR.G26603 Trifolium pratense HOM05D007833 ORTHO05D009855 3.7e-06 55.5 46 56.5
Sed0020364 Sechium edule HOM05D007833 ORTHO05D009855 4.8e-06 55.1 71 43.7
BcaC06g32911 Brassica carinata HOM05D007833 ORTHO05D009855 6.3e-06 54.7 51 51.0
BcaC06g33387 Brassica carinata HOM05D007833 ORTHO05D009855 6.3e-06 54.7 51 51.0
C07p46950 Brassica napus HOM05D000938 ORTHO05D001451 6.3e-06 54.7 51 51.0
BolC7t45211H Brassica oleracea HOM05D000938 ORTHO05D001451 6.3e-06 54.7 51 51.0
Atru.chr5.1399 Acer truncatum HOM05D007833 ORTHO05D009855 8.2e-06 54.3 61 44.3
Duzib138G0003 Durio zibethinus HOM05D007833 ORTHO05D009855 8.2e-06 54.3 44 56.8
RcHm_v2.0_Chr6g0291241 Rosa chinensis HOM05D007833 ORTHO05D009855 8.2e-06 54.3 62 46.8


User provided reference genes

Program Settings