Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 1.0e-132 476.9 261 100.0
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 2.9e-34 149.8 256 42.2
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 8.3e-34 148.3 219 48.4
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 1.8e-33 147.1 177 52.0
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 2.4e-33 146.7 129 63.6
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 1.6e-32 144.1 193 48.7
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 2.7e-32 143.3 154 53.9
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 2.7e-32 143.3 237 46.0
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 7.8e-32 141.7 104 69.2
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 1.7e-31 140.6 272 43.0
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 2.3e-31 140.2 210 48.1
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 3.9e-31 139.4 190 48.9
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 3.9e-31 139.4 190 48.9
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 5.0e-31 139.0 133 59.4
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 8.6e-31 138.3 236 43.6
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 8.6e-31 138.3 249 44.2
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 1.1e-30 137.9 173 48.6
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.1e-30 137.9 190 48.9
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 1.5e-30 137.5 218 45.0
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.9e-30 137.1 211 47.4
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 1.9e-30 137.1 161 53.4
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 2.5e-30 136.7 207 47.3
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 2.5e-30 136.7 223 46.6
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 3.3e-30 136.3 122 59.8
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 3.3e-30 136.3 245 42.9
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 3.3e-30 136.3 150 56.0
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 9.5e-30 134.8 199 48.2
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 9.5e-30 134.8 217 45.2
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 1.6e-29 134.0 194 46.4
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 1.6e-29 134.0 203 43.3
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 1.6e-29 134.0 132 53.0
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 1.6e-29 134.0 247 42.9
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 1.6e-29 134.0 218 44.5
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 1.6e-29 134.0 194 44.3
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 1.6e-29 134.0 189 48.7
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 2.1e-29 133.7 222 45.0
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 2.1e-29 133.7 141 53.9
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 2.1e-29 133.7 224 42.9
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 2.8e-29 133.3 197 45.2
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 2.8e-29 133.3 108 61.1
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 3.6e-29 132.9 228 42.5
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 3.6e-29 132.9 227 44.5
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 3.6e-29 132.9 117 61.5
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 3.6e-29 132.9 247 42.5
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 3.6e-29 132.9 213 44.6
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 4.7e-29 132.5 132 53.0
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 4.7e-29 132.5 112 63.4
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 6.2e-29 132.1 139 56.8
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 8.0e-29 131.7 257 41.6
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 8.0e-29 131.7 221 46.2
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 8.0e-29 131.7 239 41.8
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 8.0e-29 131.7 112 61.6
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 1.0e-28 131.3 153 50.3
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 1.4e-28 131.0 225 46.2
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 1.4e-28 131.0 203 46.3
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 1.8e-28 130.6 248 44.4
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 2.3e-28 130.2 138 52.2
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 4.0e-28 129.4 271 39.1
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 5.2e-28 129.0 151 50.3
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 5.2e-28 129.0 187 46.0
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 5.2e-28 129.0 236 41.1
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 5.2e-28 129.0 105 61.9
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 6.8e-28 128.6 217 43.3
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 8.9e-28 128.3 182 45.6
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 1.5e-27 127.5 240 39.2
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 1.5e-27 127.5 216 43.1
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 3.4e-27 126.3 102 61.8
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 3.4e-27 126.3 267 40.1
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 5.8e-27 125.6 138 52.9
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 7.5e-27 125.2 115 58.3
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 9.8e-27 124.8 121 58.7
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 9.8e-27 124.8 121 58.7
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 9.8e-27 124.8 228 42.5
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 9.8e-27 124.8 269 39.8
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 9.8e-27 124.8 235 40.4
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 1.7e-26 124.0 133 55.6
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 1.7e-26 124.0 133 55.6
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 1.7e-26 124.0 264 38.6
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 2.9e-26 123.2 159 50.9
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 4.9e-26 122.5 131 54.2
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 4.9e-26 122.5 226 42.5
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 8.3e-26 121.7 256 41.8
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 1.1e-25 121.3 141 51.8
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 1.1e-25 121.3 240 42.1
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 1.9e-25 120.6 174 46.0
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 1.9e-25 120.6 244 38.5
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 1.9e-25 120.6 229 41.9
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 2.4e-25 120.2 235 41.7
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 7.0e-25 118.6 177 45.2
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 9.2e-25 118.2 97 63.9
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 9.2e-25 118.2 213 44.1
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 4.6e-24 115.9 174 46.6
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 6.0e-24 115.5 158 47.5
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 2.3e-23 113.6 139 46.8
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 6.6e-23 112.1 198 41.9
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 8.6e-23 111.7 127 51.2
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 1.1e-22 111.3 179 42.5
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 1.1e-22 111.3 179 42.5
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 1.9e-22 110.5 184 44.0
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 1.9e-22 110.5 184 44.0
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 5.6e-22 109.0 214 37.4
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 2.6e-19 100.1 196 39.3
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 5.8e-19 99.0 132 48.5
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 4.9e-18 95.9 90 51.1
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 1.6e-16 90.9 104 45.2
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 2.7e-16 90.1 123 41.5
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 2.3e-15 87.0 116 47.4
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 6.6e-15 85.5 123 43.1
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 2.5e-14 83.6 63 68.3
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 1.6e-13 80.9 52 80.8
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 5.2e-12 75.9 52 73.1
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 8.9e-12 75.1 54 64.8
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 9.9e-11 71.6 68 54.4
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 9.9e-11 71.6 67 55.2
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.2e-10 70.5 58 58.6
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.9e-10 70.1 60 56.7
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.9e-10 70.1 60 56.7
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.9e-10 69.3 66 56.1
SMO367G1025 Selaginella moellendorffii HOM05D006646 ORTHO05D008279 1.6e-08 64.3 80 43.8
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 6.0e-08 62.4 47 66.0
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 7.8e-08 62.0 64 53.1


User provided reference genes

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