Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_007389 Vanilla planifolia HOM05D006582 ORTHO05D008313 7.0e-173 610.5 311 100.0
Sed0002968 Sechium edule HOM05D006582 ORTHO05D008313 2.6e-87 326.2 313 57.5
GSVIVG01038593001 Vitis vinifera HOM05D006582 ORTHO05D008313 1.7e-86 323.6 315 56.5
CsaV3_5G000310 Cucumis sativus L. HOM05D006582 ORTHO05D008313 2.2e-86 323.2 277 62.8
MELO3C005901.2 Cucumis melo HOM05D006582 ORTHO05D008313 1.9e-85 320.1 277 62.5
Aa31LG3G9690 Aethionema arabicum HOM05D006582 ORTHO05D008313 5.5e-85 318.5 314 54.5
Nitab4.5_0002780g0150 Nicotiana tabacum HOM05D006582 ORTHO05D008313 5.5e-85 318.5 260 65.0
Cfa016201 Carpinus fangiana HOM05D006582 ORTHO05D008313 1.2e-84 317.4 313 56.2
Prupe.2G171600 Prunus persica HOM05D006582 ORTHO05D008313 2.1e-84 316.6 313 56.2
Thecc.03G203200 Theobroma cacao HOM05D006582 ORTHO05D008313 2.1e-84 316.6 275 61.8
PSO782G4269 Papaver somniferum HOM05D006582 ORTHO05D008313 2.7e-84 316.2 275 58.9
THA.LOC104811904 Tarenaya hassleriana HOM05D006582 ORTHO05D008313 2.7e-84 316.2 316 55.4
Hma1.2p1_0415F.1_g148010 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 3.6e-84 315.8 313 55.9
COL.COLO4_16812 Corchorus olitorius HOM05D006582 ORTHO05D008313 6.1e-84 315.1 310 56.1
FAN01G0099 Fragaria x ananassa HOM05D006582 ORTHO05D008313 1.0e-83 314.3 276 60.9
FAN03G0584 Fragaria x ananassa HOM05D006582 ORTHO05D008313 2.3e-83 313.2 276 60.5
RcHm_v2.0_Chr1g0355871 Rosa chinensis HOM05D006582 ORTHO05D008313 2.3e-83 313.2 274 60.6
Nn6g34389 Nelumbo nucifera HOM05D006582 ORTHO05D008313 3.0e-83 312.8 318 54.7
FvH4_7g14460 Fragaria vesca HOM05D006582 ORTHO05D008313 4.0e-83 312.4 276 60.1
FAN06G2233 Fragaria x ananassa HOM05D006582 ORTHO05D008313 4.0e-83 312.4 276 60.1
FAN06G3963 Fragaria x ananassa HOM05D006582 ORTHO05D008313 4.0e-83 312.4 276 60.1
PGR142G1628 Punica granatum HOM05D006582 ORTHO05D008313 4.0e-83 312.4 313 55.3
Actinidia34241 Actinidia chinensis HOM05D006582 ORTHO05D008313 5.2e-83 312.0 278 59.4
AT4G27750 Arabidopsis thaliana HOM05D006582 ORTHO05D008313 5.2e-83 312.0 314 54.5
Dinv29249 Davidia involucrata HOM05D006582 ORTHO05D008313 5.2e-83 312.0 275 61.1
Gorai.004G122700 Gossypium raimondii HOM05D006582 ORTHO05D008313 5.2e-83 312.0 275 60.7
TAR374G0762 Trochodendron aralioides HOM05D006582 ORTHO05D008313 5.2e-83 312.0 274 60.9
MD07G1135900 Malus domestica HOM05D006582 ORTHO05D008313 6.8e-83 311.6 313 55.9
CSS0043436 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 8.8e-83 311.2 278 59.4
CARHR235480 Cardamine hirsuta HOM05D006582 ORTHO05D008313 8.8e-83 311.2 315 54.3
Thhalv10025816m.g Eutrema salsugineum HOM05D006582 ORTHO05D008313 1.2e-82 310.8 314 53.8
Gohir.D08G113800 Gossypium hirsutum HOM05D006582 ORTHO05D008313 1.2e-82 310.8 275 60.0
CSS0003388 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 2.6e-82 309.7 278 59.0
Nitab4.5_0007755g0010 Nicotiana tabacum HOM05D006582 ORTHO05D008313 3.4e-82 309.3 282 59.9
TWI60G0746 Tripterygium wilfordii HOM05D006582 ORTHO05D008313 4.4e-82 308.9 319 54.9
AL7G24900 Arabidopsis lyrata HOM05D006582 ORTHO05D008313 5.7e-82 308.5 313 53.7
A01p19210 Brassica napus HOM05D006582 ORTHO05D008313 5.7e-82 308.5 315 54.3
Carub.0007s1306 Capsella rubella HOM05D006582 ORTHO05D008313 5.7e-82 308.5 315 54.3
CiPaw.06G044200 Carya illinoinensis HOM05D006582 ORTHO05D008313 5.7e-82 308.5 313 54.3
BcaC09g50542 Brassica carinata HOM05D006582 ORTHO05D008313 9.7e-82 307.8 314 53.8
CANSAT21G1996 Cannabis sativa HOM05D006582 ORTHO05D008313 9.7e-82 307.8 313 56.2
Duzib068G0295 Durio zibethinus HOM05D006582 ORTHO05D008313 9.7e-82 307.8 310 55.2
BcaNung01623 Brassica carinata HOM05D006582 ORTHO05D008313 1.3e-81 307.4 314 54.1
BraA01t01863Z Brassica rapa HOM05D006582 ORTHO05D008313 1.3e-81 307.4 315 54.0
Migut.F00182 Erythranthe guttata HOM05D006582 ORTHO05D008313 1.3e-81 307.4 278 59.0
Aqoxy7G00041 Aquilegia oxysepala HOM05D006582 ORTHO05D008313 1.7e-81 307.0 313 55.9
Sp7g25720 Schrenkiella parvula HOM05D006582 ORTHO05D008313 1.7e-81 307.0 313 53.7
Ah.07g205040 Amaranthus hybridus HOM05D006582 ORTHO05D008313 2.2e-81 306.6 274 58.8
AUR62035580 Chenopodium quinoa HOM05D006582 ORTHO05D008313 2.2e-81 306.6 290 56.6
C01p24110 Brassica napus HOM05D006582 ORTHO05D008313 3.7e-81 305.8 314 53.8
Rhsim03G0211600 Rhododendron simsii HOM05D006582 ORTHO05D008313 8.3e-81 304.7 278 57.6
SGA_v2.0_scaffold18G08434 Striga asiatica HOM05D006582 ORTHO05D008313 1.1e-80 304.3 278 59.4
AUR62006048 Chenopodium quinoa HOM05D006582 ORTHO05D008313 1.4e-80 303.9 271 58.3
SalBow4G1606 Salvia bowleyana HOM05D006582 ORTHO05D008313 1.8e-80 303.5 278 59.0
Ciclev10021376m.g Citrus clementina HOM05D006582 ORTHO05D008313 2.4e-80 303.1 314 54.8
Lsat_1_v5_gn_2_135281 Lactuca sativa HOM05D006582 ORTHO05D008313 2.4e-80 303.1 313 54.3
PGSC0003DMG402018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 2.4e-80 303.1 278 59.0
Solyc03g082820.3 Solanum lycopersicum HOM05D006582 ORTHO05D008313 3.1e-80 302.8 278 58.3
Sopen03g022560 Solanum pennellii HOM05D006582 ORTHO05D008313 3.1e-80 302.8 278 58.6
Peaxi162Scf00740g00331 Petunia axillaris HOM05D006582 ORTHO05D008313 4.1e-80 302.4 278 58.3
CAN.G481.47 Capsicum annuum HOM05D006582 ORTHO05D008313 5.3e-80 302.0 274 58.8
Haze_00249 Corylus avellana HOM05D006582 ORTHO05D008313 5.3e-80 302.0 341 51.6
Haze_00255 Corylus avellana HOM05D006582 ORTHO05D008313 5.3e-80 302.0 341 51.6
arahy.Tifrunner.gnm1.ann1.AV4C6H Arachis hypogaea HOM05D006582 ORTHO05D008313 7.0e-80 301.6 315 55.2
arahy.Tifrunner.gnm1.ann1.D33ADG Arachis hypogaea HOM05D006582 ORTHO05D008313 7.0e-80 301.6 315 55.2
EL10Ac3g05224 Beta vulgaris HOM05D006582 ORTHO05D008313 1.2e-79 300.8 274 58.4
QL09p007748 Quercus lobata HOM05D006582 ORTHO05D008313 2.0e-79 300.1 313 54.6
HanXRQChr07g0206401 Helianthus annuus HOM05D006582 ORTHO05D008313 1.3e-78 297.4 273 58.6
Lj3A900T44 Lonicera japonica HOM05D006582 ORTHO05D008313 5.0e-78 295.4 273 57.1
Sc19g0000750 Simmondsia chinensis HOM05D006582 ORTHO05D008313 5.0e-78 295.4 274 56.6
unitig_747.g21740 Utricularia gibba HOM05D006582 ORTHO05D008313 5.0e-78 295.4 313 52.1
Phvul.011G018800 Phaseolus vulgaris HOM05D006582 ORTHO05D008313 1.1e-77 294.3 322 52.5
BolC1t02368H Brassica oleracea HOM05D006582 ORTHO05D008313 1.9e-77 293.5 343 49.6
Sabra15G0024300 Salix brachista HOM05D006582 ORTHO05D008313 2.5e-77 293.1 277 56.3
Cc04_g16300 Coffea canephora HOM05D006582 ORTHO05D008313 3.2e-77 292.7 275 57.1
Manes.01G148600 Manihot esculenta HOM05D006582 ORTHO05D008313 9.4e-77 291.2 309 53.7
Glyma.11G108800 Glycine max HOM05D006582 ORTHO05D008313 1.2e-76 290.8 322 53.7
Hund11634 Selenicereus undatus HOM05D006582 ORTHO05D008313 1.2e-76 290.8 272 54.8
Ca_18952_v3 Cicer arietinum L. HOM05D006582 ORTHO05D008313 8.0e-76 288.1 319 53.6
TPR.G19615 Trifolium pratense HOM05D006582 ORTHO05D008313 8.0e-76 288.1 317 52.7
DCAR_008960 Daucus carota HOM05D006582 ORTHO05D008313 1.0e-75 287.7 277 56.3
MBI04_g35986_MAGBIO Magnolia biondii HOM05D006582 ORTHO05D008313 2.3e-75 286.6 274 60.2
VMungo1127G0470 Vigna mungo HOM05D006582 ORTHO05D008313 3.0e-75 286.2 315 52.7
vmacro06405 Vaccinium macrocarpon HOM05D006582 ORTHO05D008313 4.0e-75 285.8 331 48.9
ATR0933G001 Amborella trichopoda HOM05D006582 ORTHO05D008313 6.8e-75 285.0 293 53.9
Lj3g0025694 Lotus japonicus HOM05D006582 ORTHO05D008313 8.8e-75 284.6 288 55.9
Medtr4g078140 Medicago truncatula HOM05D006582 ORTHO05D008313 1.5e-74 283.9 319 52.7
Psat7g170040 Pisum sativum HOM05D006582 ORTHO05D008313 5.7e-74 282.0 280 56.4
Os06g0129300 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 1.7e-73 280.4 273 58.2
Glyma.12G016600 Glycine max HOM05D006582 ORTHO05D008313 2.2e-73 280.0 318 53.1
Hund21029 Selenicereus undatus HOM05D006582 ORTHO05D008313 3.7e-73 279.3 295 51.5
Lalb_Chr03g0024361 Lupinus albus HOM05D006582 ORTHO05D008313 1.4e-72 277.3 282 55.0
MD01G1064000 Malus domestica HOM05D006582 ORTHO05D008313 1.0e-70 271.2 289 54.7
Zm00001eb378450 Zea mays HOM05D006582 ORTHO05D008313 1.0e-70 271.2 274 55.8
ECA238G3804 Erigeron canadensis HOM05D006582 ORTHO05D008313 2.9e-70 269.6 279 55.6
BcaNung01628 Brassica carinata HOM05D006582 ORTHO05D008313 1.1e-69 267.7 314 49.4
SGA_v2.0_scaffold44G16825 Striga asiatica HOM05D006582 ORTHO05D008313 2.8e-68 263.1 278 51.4
BcaNung01632 Brassica carinata HOM05D006582 ORTHO05D008313 3.2e-64 249.6 328 46.6
Os10g0520900 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 2.3e-54 216.9 263 45.6
CDE04G1908 Ceratophyllum demersum HOM05D006582 ORTHO05D008313 2.2e-49 200.3 273 44.7
Eucgr.K00407 Eucalyptus grandis HOM05D006582 ORTHO05D008313 3.7e-49 199.5 237 47.7
Hma1.2p1_0415F.1_g148020 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 3.7e-49 199.5 237 48.5
Gohir.A08G102500 Gossypium hirsutum HOM05D006582 ORTHO05D008313 5.4e-48 195.7 234 48.3
MD01G1064500 Malus domestica HOM05D006582 ORTHO05D008313 2.1e-47 193.7 203 54.2
Zm00001eb021230 Zea mays HOM05D006582 ORTHO05D008313 7.8e-47 191.8 286 41.6
Cpa.g.sc3.116 Carica papaya HOM05D006582 ORTHO05D008313 1.4e-43 181.0 194 52.1
Potri.015G029300 Populus trichocarpa HOM05D006582 ORTHO05D008313 1.5e-42 177.6 144 61.8
MD01G1063600 Malus domestica HOM05D006582 ORTHO05D008313 2.4e-40 170.2 234 45.7
SMO356G0114 Selaginella moellendorffii HOM05D001613 ORTHO05D001556 4.4e-34 149.4 283 33.9
Mapoly0081s0017 Marchantia polymorpha HOM05D006582 ORTHO05D008313 4.9e-33 146.0 282 35.8
Hma1.2p1_0512F.1_g169380 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 5.4e-32 142.5 151 55.0
Pp3c14_24810 Physcomitrium patens HOM05D006582 ORTHO05D008313 1.0e-30 138.3 295 32.9
PGSC0003DMG401018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 1.3e-28 131.3 118 57.6
CiPaw.05G199600 Carya illinoinensis HOM05D006582 ORTHO05D008313 9.0e-27 125.2 114 52.6
AagrBONN_evm.TU.Sc2ySwM_228.4673 Anthoceros agrestis HOM05D006582 ORTHO05D008313 1.3e-25 121.3 142 46.5
Hma1.2p1_0415F.1_g148000 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 6.0e-23 112.5 89 67.4
CBR_g57838 Chara braunii HOM05D006582 ORTHO05D008313 2.4e-19 100.5 217 33.2
SHI19113 Sapria himalayana HOM05D006582 ORTHO05D008313 1.7e-17 94.4 75 66.7
Rhsim03G0115100 Rhododendron simsii HOM05D006582 ORTHO05D023108 9.3e-16 88.6 102 48.0
SHI19111 Sapria himalayana HOM05D006582 ORTHO05D008313 3.9e-14 83.2 69 59.4
SEGI_26283 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 1.9e-13 80.9 82 47.6


User provided reference genes

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