Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_007350 Vanilla planifolia HOM05D005997 ORTHO05D008323 5.1e-122 441.0 217 100.0
Eucgr.F03518 Eucalyptus grandis HOM05D005997 ORTHO05D008323 3.3e-52 209.1 148 66.2
Hma1.2p1_0036F.1_g022850 Hydrangea macrophylla HOM05D005997 ORTHO05D008323 7.3e-52 208.0 170 59.4
TAR624G0829 Trochodendron aralioides HOM05D005997 ORTHO05D008323 7.3e-52 208.0 147 65.3
Gohir.A01G086200 Gossypium hirsutum HOM05D005997 ORTHO05D008323 3.6e-51 205.7 165 63.6
Potri.008G180300 Populus trichocarpa HOM05D005997 ORTHO05D008323 6.2e-51 204.9 160 63.1
RcHm_v2.0_Chr5g0042181 Rosa chinensis HOM05D005997 ORTHO05D008323 1.4e-50 203.8 166 59.6
Thecc.07G024000 Theobroma cacao HOM05D005997 ORTHO05D008323 1.8e-50 203.4 180 56.1
Gohir.D01G072400 Gossypium hirsutum HOM05D005997 ORTHO05D008323 2.4e-50 203.0 165 62.4
Actinidia00103 Actinidia chinensis HOM05D005997 ORTHO05D008323 3.1e-50 202.6 143 65.7
FAN21G1688 Fragaria x ananassa HOM05D005997 ORTHO05D008323 3.1e-50 202.6 157 61.8
Manes.03G134100 Manihot esculenta HOM05D005997 ORTHO05D008323 3.1e-50 202.6 184 59.2
RcHm_v2.0_Chr5g0042111 Rosa chinensis HOM05D005997 ORTHO05D008323 4.0e-50 202.2 166 58.4
CANSAT11G0206 Cannabis sativa HOM05D005997 ORTHO05D008323 6.9e-50 201.4 170 60.6
Sabra08G0137600 Salix brachista HOM05D005997 ORTHO05D008323 9.0e-50 201.1 160 60.0
Gorai.002G095400 Gossypium raimondii HOM05D005997 ORTHO05D008323 1.2e-49 200.7 165 61.8
COL.COLO4_09766 Corchorus olitorius HOM05D005997 ORTHO05D008323 2.6e-49 199.5 147 63.9
Sopen07g033400 Solanum pennellii HOM05D005997 ORTHO05D008323 3.4e-49 199.1 217 48.8
Sc07g0002940 Simmondsia chinensis HOM05D005997 ORTHO05D008323 4.5e-49 198.7 144 63.9
Ciclev10009024m.g Citrus clementina HOM05D005997 ORTHO05D008323 5.8e-49 198.4 144 62.5
Nn1g03269 Nelumbo nucifera HOM05D005997 ORTHO05D008323 7.6e-49 198.0 144 62.5
SGA_v2.0_scaffold168G38522 Striga asiatica HOM05D005997 ORTHO05D008323 7.6e-49 198.0 147 61.9
SEGI_04256 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 9.9e-49 197.6 143 65.0
Solyc07g065180.3 Solanum lycopersicum HOM05D005997 ORTHO05D008323 1.3e-48 197.2 217 48.8
Duzib213G0008 Durio zibethinus HOM05D005997 ORTHO05D008323 1.7e-48 196.8 162 60.5
PGSC0003DMG400022292 Solanum tuberosum HOM05D005997 ORTHO05D008323 1.7e-48 196.8 176 55.7
Cc05_g14560 Coffea canephora HOM05D005997 ORTHO05D008323 2.2e-48 196.4 170 58.8
ATR0712G169 Amborella trichopoda HOM05D005997 ORTHO05D008323 2.9e-48 196.1 136 66.2
CAN.G337.36 Capsicum annuum HOM05D005997 ORTHO05D008323 3.8e-48 195.7 176 55.7
Dinv40826 Davidia involucrata HOM05D005997 ORTHO05D008323 3.8e-48 195.7 154 60.4
Psat5g172000 Pisum sativum HOM05D005997 ORTHO05D008323 3.8e-48 195.7 167 59.3
TPR.G1907 Trifolium pratense HOM05D005997 ORTHO05D008323 3.8e-48 195.7 162 57.4
GSVIVG01037764001 Vitis vinifera HOM05D005997 ORTHO05D008323 8.4e-48 194.5 174 56.9
DCAR_022603 Daucus carota HOM05D005997 ORTHO05D008323 1.1e-47 194.1 151 60.9
Nitab4.5_0001160g0200 Nicotiana tabacum HOM05D005997 ORTHO05D008323 1.1e-47 194.1 176 55.1
Nitab4.5_0010102g0010 Nicotiana tabacum HOM05D005997 ORTHO05D008323 1.4e-47 193.7 176 55.1
Zm00001eb049320 Zea mays HOM05D005997 ORTHO05D008323 2.4e-47 193.0 139 66.2
FvH4_3g23860 Fragaria vesca HOM05D005997 ORTHO05D008323 3.2e-47 192.6 132 67.4
Ca_20145_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 5.4e-47 191.8 164 55.5
THA.LOC104826490 Tarenaya hassleriana HOM05D005997 ORTHO05D008323 5.4e-47 191.8 156 59.6
VMungo0540G2314 Vigna mungo HOM05D005997 ORTHO05D008323 1.2e-46 190.7 143 62.9
FAN25G0611 Fragaria x ananassa HOM05D005997 ORTHO05D008323 1.6e-46 190.3 190 52.6
TWI38G0893 Tripterygium wilfordii HOM05D005997 ORTHO05D008323 2.1e-46 189.9 148 60.8
Thhalv10011693m.g Eutrema salsugineum HOM05D005997 ORTHO05D008323 3.5e-46 189.1 143 60.1
Medtr3g055920 Medicago truncatula HOM05D005997 ORTHO05D008323 3.5e-46 189.1 164 56.7
PSO210G1255 Papaver somniferum HOM05D005997 ORTHO05D008323 4.6e-46 188.7 144 60.4
Migut.M01687 Erythranthe guttata HOM05D005997 ORTHO05D008323 6.0e-46 188.3 147 60.5
BraA06t23516Z Brassica rapa HOM05D005997 ORTHO05D008323 7.9e-46 188.0 143 59.4
Carub.0001s3961 Capsella rubella HOM05D005997 ORTHO05D008323 1.0e-45 187.6 143 60.1
AL1G58220 Arabidopsis lyrata HOM05D005997 ORTHO05D008323 1.3e-45 187.2 143 59.4
MELO3C024895.2 Cucumis melo HOM05D005997 ORTHO05D008323 1.3e-45 187.2 144 60.4
Phvul.006G051400 Phaseolus vulgaris HOM05D005997 ORTHO05D008323 1.3e-45 187.2 149 61.1
A06p03040 Brassica napus HOM05D005997 ORTHO05D008323 1.8e-45 186.8 143 58.7
CARHR040570 Cardamine hirsuta HOM05D005997 ORTHO05D008323 1.8e-45 186.8 143 59.4
Ca_20142_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 1.8e-45 186.8 149 60.4
Os03g0587100 Oryza sativa ssp. japonica HOM05D005997 ORTHO05D008323 2.3e-45 186.4 134 61.9
Prupe.4G230500 Prunus persica HOM05D005997 ORTHO05D008323 2.3e-45 186.4 147 63.3
MBI16_g42314_MAGBIO Magnolia biondii HOM05D005997 ORTHO05D008323 3.0e-45 186.0 147 62.6
PGR044G2356 Punica granatum HOM05D005997 ORTHO05D008323 3.0e-45 186.0 133 65.4
Sp1g37390 Schrenkiella parvula HOM05D005997 ORTHO05D008323 3.0e-45 186.0 143 60.8
Lj6g0009736 Lotus japonicus HOM05D005997 ORTHO05D008323 3.9e-45 185.7 163 58.3
Lalb_Chr06g0174051 Lupinus albus HOM05D005997 ORTHO05D008323 5.1e-45 185.3 143 60.8
BcaB07g33491 Brassica carinata HOM05D005997 ORTHO05D008323 6.7e-45 184.9 143 58.7
Aqoxy1G04030 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 8.7e-45 184.5 139 61.9
Glyma.08G325100 Glycine max HOM05D005997 ORTHO05D008323 8.7e-45 184.5 149 60.4
MSTRG.6975 Avicennia marina HOM05D005997 ORTHO05D008323 1.1e-44 184.1 161 56.5
AT1G50575 Arabidopsis thaliana HOM05D005997 ORTHO05D008323 1.5e-44 183.7 149 56.4
SalBow8G0955 Salvia bowleyana HOM05D005997 ORTHO05D008323 1.5e-44 183.7 144 58.3
CsaV3_7G018710 Cucumis sativus L. HOM05D005997 ORTHO05D008323 1.9e-44 183.3 143 60.1
Oeu019619.1 Olea europaea HOM05D005997 ORTHO05D008323 1.9e-44 183.3 136 61.0
arahy.Tifrunner.gnm1.ann1.JACZ02 Arachis hypogaea HOM05D005997 ORTHO05D008323 2.5e-44 183.0 163 55.2
CiPaw.12G135200 Carya illinoinensis HOM05D005997 ORTHO05D008323 2.5e-44 183.0 133 63.9
EL10Ac4g07628 Beta vulgaris HOM05D005997 ORTHO05D008323 3.3e-44 182.6 179 50.3
BcaC08g43226 Brassica carinata HOM05D005997 ORTHO05D008323 4.3e-44 182.2 143 57.3
C06p05740 Brassica napus HOM05D005997 ORTHO05D008323 4.3e-44 182.2 143 57.3
BolC6t35684H Brassica oleracea HOM05D005997 ORTHO05D008323 4.3e-44 182.2 143 57.3
ECA236G3940 Erigeron canadensis HOM05D004336 ORTHO05D005367 7.4e-44 181.4 139 61.9
unitig_899.g15278 Utricularia gibba HOM05D005997 ORTHO05D008323 9.6e-44 181.0 141 58.9
Aa31LG10G3760 Aethionema arabicum HOM05D005997 ORTHO05D008323 1.3e-43 180.6 143 57.3
arahy.Tifrunner.gnm1.ann1.N1CS9Q Arachis hypogaea HOM05D005997 ORTHO05D008323 1.6e-43 180.3 162 54.9
AagrBONN_evm.TU.Sc2ySwM_362.871 Anthoceros agrestis HOM05D005997 ORTHO05D008323 2.1e-43 179.9 143 59.4
Sed0012266 Sechium edule HOM05D005997 ORTHO05D008323 2.8e-43 179.5 140 60.0
MD11G1206400 Malus domestica HOM05D005997 ORTHO05D008323 3.6e-43 179.1 155 58.1
ClCG09G021010 Citrullus lanatus HOM05D005997 ORTHO05D008323 6.2e-43 178.3 138 59.4
CDE07G1873 Ceratophyllum demersum HOM05D005997 ORTHO05D008323 1.4e-42 177.2 148 61.5
Lj1C884G3 Lonicera japonica HOM05D005997 ORTHO05D008323 1.2e-41 174.1 167 53.9
Lsat_1_v5_gn_7_114661 Lactuca sativa HOM05D005997 ORTHO05D008323 1.5e-41 173.7 169 51.5
SMO196G0283 Selaginella moellendorffii HOM05D005997 ORTHO05D008323 2.6e-41 172.9 134 59.7
Dinv10299 Davidia involucrata HOM05D005997 ORTHO05D008323 3.4e-41 172.6 116 66.4
Pp3c14_23810 Physcomitrium patens HOM05D005997 ORTHO05D008323 3.8e-40 169.1 140 57.9
Rhsim06G0225700 Rhododendron simsii HOM05D005997 ORTHO05D008323 2.4e-39 166.4 162 54.3
arahy.Tifrunner.gnm1.ann1.D6FGWZ Arachis hypogaea HOM05D005997 ORTHO05D008323 2.3e-37 159.8 154 51.9
Glyma.18G084600 Glycine max HOM05D005997 ORTHO05D008323 8.1e-35 151.4 120 60.0
PGR031G3624 Punica granatum HOM05D005997 ORTHO05D008323 4.5e-33 145.6 107 63.6
Peaxi162Scf00047g00845 Petunia axillaris HOM05D005997 ORTHO05D008323 1.0e-32 144.4 157 47.8
CSS0025804 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 6.5e-32 141.7 143 53.1
Haze_09774 Corylus avellana HOM05D005997 ORTHO05D008323 4.6e-30 135.6 145 51.0
Psat5g171680 Pisum sativum HOM05D005997 ORTHO05D008323 3.0e-29 132.9 96 66.7
Cpa.g.sc12.206 Carica papaya HOM05D005997 ORTHO05D008323 1.9e-28 130.2 91 69.2
AUR62015935 Chenopodium quinoa HOM05D005997 ORTHO05D008323 1.9e-28 130.2 93 63.4
AUR62040674 Chenopodium quinoa HOM05D005997 ORTHO05D008323 3.3e-28 129.4 93 63.4
Atru.BG.132.p Acer truncatum HOM05D005997 ORTHO05D008323 5.7e-28 128.6 90 68.9
QL08p008622 Quercus lobata HOM05D005997 ORTHO05D008323 5.7e-28 128.6 92 65.2
MCO09G728 Micromonas commoda HOM05D004293 ORTHO05D005044 7.4e-28 128.3 139 45.3
Aqoxy1G04027 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 1.6e-27 127.1 108 57.4
MCO11G065 Micromonas commoda HOM05D004293 ORTHO05D005044 2.8e-27 126.3 139 45.3
vmacro11568 Vaccinium macrocarpon HOM05D005997 ORTHO05D008323 1.1e-26 124.4 91 64.8
Cre01.g039850 Chlamydomonas reinhardtii HOM05D005997 ORTHO05D005044 5.3e-26 122.1 143 44.8
PSO302G0218 Papaver somniferum HOM05D005997 ORTHO05D008323 1.5e-25 120.6 103 57.3
PRCOL_00002636 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 5.1e-21 105.5 138 40.6
SEGI_34153 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 6.9e-18 95.1 63 73.0
PRCOL_00000116 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 2.0e-17 93.6 133 36.8
CSS0048391 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 1.9e-15 87.0 75 56.0
QL08p004262 Quercus lobata HOM05D005997 ORTHO05D008323 4.4e-12 75.9 65 55.4
QL08p058329 Quercus lobata HOM05D005997 ORTHO05D008323 4.4e-12 75.9 65 55.4
CSS0044071 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 2.8e-11 73.2 57 63.2
QL08p058354 Quercus lobata HOM05D005997 ORTHO05D007626 3.4e-09 66.2 55 54.5
CSS0025137 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 4.5e-09 65.9 52 63.5
QL05p025044 Quercus lobata HOM05D005997 ORTHO05D008323 3.2e-07 59.7 76 42.1
Rhsim03G0100400 Rhododendron simsii HOM05D005997 ORTHO05D338268 9.4e-07 58.2 128 32.0


User provided reference genes

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