Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_007243 Vanilla planifolia HOM05D005689 ORTHO05D007060 1.1e-110 403.3 195 100.0
CARHR174210 Cardamine hirsuta HOM05D005689 ORTHO05D007060 1.2e-53 213.8 122 82.8
AT2G20930 Arabidopsis thaliana HOM05D005689 ORTHO05D007060 2.0e-53 213.0 122 82.8
Aa31LG7G15690 Aethionema arabicum HOM05D005689 ORTHO05D007060 2.7e-53 212.6 122 82.0
Cpa.g.sc20.100 Carica papaya HOM05D005689 ORTHO05D007060 2.7e-53 212.6 122 83.6
Carub.0004s0002 Capsella rubella HOM05D005689 ORTHO05D007060 4.6e-53 211.8 122 82.0
AL4G10060 Arabidopsis lyrata HOM05D005689 ORTHO05D007060 6.0e-53 211.5 122 82.0
Manes.04G071800 Manihot esculenta HOM05D005689 ORTHO05D007060 6.0e-53 211.5 126 81.7
BcaB08g34950 Brassica carinata HOM05D005689 ORTHO05D007060 7.8e-53 211.1 122 81.1
BcaC07g41181 Brassica carinata HOM05D005689 ORTHO05D007060 7.8e-53 211.1 122 81.1
ClCG02G003990 Citrullus lanatus HOM05D005689 ORTHO05D007060 7.8e-53 211.1 119 84.9
MELO3C013345.2 Cucumis melo HOM05D005689 ORTHO05D007060 7.8e-53 211.1 119 84.9
CsaV3_7G001110 Cucumis sativus L. HOM05D005689 ORTHO05D007060 7.8e-53 211.1 119 84.9
Sp4g00120 Schrenkiella parvula HOM05D005689 ORTHO05D007060 1.7e-52 209.9 122 82.0
Duzib132G1056 Durio zibethinus HOM05D005689 ORTHO05D007060 2.3e-52 209.5 122 82.8
Gohir.A03G205500 Gossypium hirsutum HOM05D005689 ORTHO05D007060 2.3e-52 209.5 122 82.8
Gohir.D02G226800 Gossypium hirsutum HOM05D005689 ORTHO05D007060 2.3e-52 209.5 122 82.8
Gorai.005G254700 Gossypium raimondii HOM05D005689 ORTHO05D007060 2.3e-52 209.5 122 82.8
Potri.009G136800 Populus trichocarpa HOM05D005689 ORTHO05D007060 3.9e-52 208.8 122 82.0
vmacro02282 Vaccinium macrocarpon HOM05D005689 ORTHO05D007060 3.9e-52 208.8 122 81.1
CANSAT25G1424 Cannabis sativa HOM05D005689 ORTHO05D007060 5.0e-52 208.4 122 82.0
QL11p051049 Quercus lobata HOM05D005689 ORTHO05D007060 5.0e-52 208.4 119 83.2
Thecc.02G057800 Theobroma cacao HOM05D005689 ORTHO05D007060 5.0e-52 208.4 122 82.0
MSTRG.19983 Avicennia marina HOM05D005689 ORTHO05D007060 6.6e-52 208.0 122 82.8
Sed0024195 Sechium edule HOM05D005689 ORTHO05D007060 6.6e-52 208.0 119 83.2
Actinidia00628 Actinidia chinensis HOM05D005689 ORTHO05D007060 8.6e-52 207.6 122 81.1
CSS0016500 Camellia sinensis var. sinensis HOM05D005689 ORTHO05D007060 8.6e-52 207.6 122 81.1
Ciclev10029529m.g Citrus clementina HOM05D005689 ORTHO05D007060 8.6e-52 207.6 122 81.1
Dinv41928 Davidia involucrata HOM05D005689 ORTHO05D007060 8.6e-52 207.6 122 80.3
Atru.chr5.3380 Acer truncatum HOM05D005689 ORTHO05D007060 1.1e-51 207.2 122 82.0
THA.LOC104824758 Tarenaya hassleriana HOM05D005689 ORTHO05D007060 1.1e-51 207.2 122 81.1
HPP92_012947 Vanilla planifolia HOM05D005689 ORTHO05D007060 1.1e-51 207.2 117 82.9
Actinidia20518 Actinidia chinensis HOM05D005689 ORTHO05D007060 1.5e-51 206.8 122 81.1
Migut.B00070 Erythranthe guttata HOM05D005689 ORTHO05D007060 1.5e-51 206.8 126 79.4
TWI31G0315 Tripterygium wilfordii HOM05D005689 ORTHO05D007060 1.5e-51 206.8 119 82.4
GSVIVG01024004001 Vitis vinifera HOM05D005689 ORTHO05D007060 1.5e-51 206.8 122 81.1
Cc09_g09830 Coffea canephora HOM05D005689 ORTHO05D007060 1.9e-51 206.5 119 82.4
FAN20G0310 Fragaria x ananassa HOM05D005689 ORTHO05D007060 1.9e-51 206.5 119 82.4
MD05G1123300 Malus domestica HOM05D005689 ORTHO05D007060 1.9e-51 206.5 119 82.4
Prupe.8G167200 Prunus persica HOM05D005689 ORTHO05D007060 3.3e-51 205.7 122 80.3
RcHm_v2.0_Chr6g0278501 Rosa chinensis HOM05D005689 ORTHO05D007060 3.3e-51 205.7 119 82.4
Aqoxy6G02106 Aquilegia oxysepala HOM05D005689 ORTHO05D007060 4.3e-51 205.3 122 79.5
Cfa005260 Carpinus fangiana HOM05D005689 ORTHO05D007060 4.3e-51 205.3 122 80.3
Duzib248G0128 Durio zibethinus HOM05D005689 ORTHO05D007060 4.3e-51 205.3 122 81.1
FAN24G0830 Fragaria x ananassa HOM05D005689 ORTHO05D007060 4.3e-51 205.3 119 81.5
MD10G1126300 Malus domestica HOM05D005689 ORTHO05D007060 4.3e-51 205.3 119 82.4
ECA233G5373 Erigeron canadensis HOM05D005689 ORTHO05D007060 5.6e-51 204.9 119 81.5
FvH4_2g15500 Fragaria vesca HOM05D005689 ORTHO05D007060 5.6e-51 204.9 119 81.5
FAN15G3340 Fragaria x ananassa HOM05D005689 ORTHO05D007060 5.6e-51 204.9 119 81.5
HanXRQChr03g0080211 Helianthus annuus HOM05D005689 ORTHO05D007060 7.3e-51 204.5 119 81.5
Peaxi162Scf00362g00537 Petunia axillaris HOM05D005689 ORTHO05D007060 9.5e-51 204.1 122 80.3
Sc18g0006380 Simmondsia chinensis HOM05D005689 ORTHO05D007060 9.5e-51 204.1 122 79.5
unitig_0.g36 Utricularia gibba HOM05D005689 ORTHO05D007060 9.5e-51 204.1 122 80.3
EL10Ac9g21356 Beta vulgaris HOM05D005689 ORTHO05D007060 1.2e-50 203.8 122 78.7
CiPaw.05G083600 Carya illinoinensis HOM05D005689 ORTHO05D007060 1.2e-50 203.8 122 78.7
Thhalv10026520m.g Eutrema salsugineum HOM05D005689 ORTHO05D007060 1.2e-50 203.8 119 79.8
FAN27G1498 Fragaria x ananassa HOM05D005689 ORTHO05D007060 1.2e-50 203.8 119 80.7
Hund06443 Selenicereus undatus HOM05D005689 ORTHO05D007060 1.2e-50 203.8 122 79.5
Eucgr.I01435 Eucalyptus grandis HOM05D005689 ORTHO05D007060 1.6e-50 203.4 117 82.1
Lsat_1_v5_gn_8_123161 Lactuca sativa HOM05D005689 ORTHO05D007060 1.6e-50 203.4 119 80.7
PGSC0003DMG400006181 Solanum tuberosum HOM05D005689 ORTHO05D007060 1.6e-50 203.4 126 77.8
Hma1.2p1_0032F.1_g019300 Hydrangea macrophylla HOM05D005689 ORTHO05D007060 2.8e-50 202.6 122 80.3
Lalb_Chr21g0306961 Lupinus albus HOM05D005689 ORTHO05D007060 2.8e-50 202.6 122 79.5
Solyc01g111690.3 Solanum lycopersicum HOM05D005689 ORTHO05D007060 2.8e-50 202.6 126 77.8
Sopen01g053730 Solanum pennellii HOM05D005689 ORTHO05D007060 2.8e-50 202.6 126 77.8
TWI75G0361 Tripterygium wilfordii HOM05D005689 ORTHO05D007060 2.8e-50 202.6 119 80.7
CAN.G588.89 Capsicum annuum HOM05D005689 ORTHO05D007060 3.6e-50 202.2 126 77.8
Thhalv10000369m.g Eutrema salsugineum HOM05D005689 ORTHO05D007060 3.6e-50 202.2 122 78.7
Glyma.18G247400 Glycine max HOM05D005689 ORTHO05D007060 3.6e-50 202.2 122 79.5
Nitab4.5_0003698g0100 Nicotiana tabacum HOM05D005689 ORTHO05D007060 3.6e-50 202.2 122 79.5
MBI12_g17551_MAGBIO Magnolia biondii HOM05D005689 ORTHO05D007060 4.7e-50 201.8 119 79.8
PGR142G2796 Punica granatum HOM05D005689 ORTHO05D007060 4.7e-50 201.8 117 80.3
TAR376G1105 Trochodendron aralioides HOM05D005689 ORTHO05D007060 4.7e-50 201.8 119 79.0
VMungo1383G2472 Vigna mungo HOM05D005689 ORTHO05D007060 4.7e-50 201.8 119 80.7
CDE02G0259 Ceratophyllum demersum HOM05D005689 ORTHO05D007060 8.1e-50 201.1 119 79.0
Glyma.09G245600 Glycine max HOM05D005689 ORTHO05D007060 8.1e-50 201.1 122 78.7
Lj1g0014054 Lotus japonicus HOM05D005689 ORTHO05D007060 8.1e-50 201.1 122 78.7
Medtr7g081040 Medicago truncatula HOM05D005689 ORTHO05D007060 8.1e-50 201.1 119 79.8
Ca_08042_v3 Cicer arietinum L. HOM05D005689 ORTHO05D007060 1.1e-49 200.7 119 79.8
TPR.G32114 Trifolium pratense HOM05D005689 ORTHO05D007060 1.1e-49 200.7 119 79.8
AUR62013016 Chenopodium quinoa HOM05D005689 ORTHO05D007060 1.4e-49 200.3 122 77.0
DCAR_003179 Daucus carota HOM05D005689 ORTHO05D007060 1.8e-49 199.9 119 78.2
Aa31LG6G16620 Aethionema arabicum HOM05D005689 ORTHO05D007060 2.3e-49 199.5 121 76.9
A09p58620 Brassica napus HOM05D005689 ORTHO05D007060 2.3e-49 199.5 122 78.7
C08p41910 Brassica napus HOM05D005689 ORTHO05D007060 2.3e-49 199.5 122 78.7
BolC8t51754H Brassica oleracea HOM05D005689 ORTHO05D007060 2.3e-49 199.5 122 78.7
BraA09t41249Z Brassica rapa HOM05D005689 ORTHO05D007060 2.3e-49 199.5 122 78.7
CiPaw.06G120900 Carya illinoinensis HOM05D005689 ORTHO05D007060 2.3e-49 199.5 122 78.7
AUR62010026 Chenopodium quinoa HOM05D005689 ORTHO05D007060 2.3e-49 199.5 122 77.9
BcaNung01978 Brassica carinata HOM05D005689 ORTHO05D007060 3.1e-49 199.1 119 78.2
Phvul.008G049900 Phaseolus vulgaris HOM05D005689 ORTHO05D007060 3.1e-49 199.1 119 79.0
DCAR_030423 Daucus carota HOM05D005689 ORTHO05D007060 4.0e-49 198.7 119 78.2
Zm00001eb331790 Zea mays HOM05D005689 ORTHO05D007060 6.8e-49 198.0 119 76.5
A06p48990 Brassica napus HOM05D005689 ORTHO05D007060 8.9e-49 197.6 119 77.3
BraA06t27765Z Brassica rapa HOM05D005689 ORTHO05D007060 8.9e-49 197.6 119 77.3
Os09g0541500 Oryza sativa ssp. japonica HOM05D005689 ORTHO05D007060 2.0e-48 196.4 119 74.8
PSO541G0653 Papaver somniferum HOM05D005689 ORTHO05D007060 2.0e-48 196.4 122 77.0
PSO675G8512 Papaver somniferum HOM05D005689 ORTHO05D007060 2.0e-48 196.4 122 77.0
Psat3g100360 Pisum sativum HOM05D005689 ORTHO05D007060 2.0e-48 196.4 110 83.6
C07p63680 Brassica napus HOM05D005689 ORTHO05D007060 2.6e-48 196.1 119 75.6
BolC7t46781H Brassica oleracea HOM05D005689 ORTHO05D007060 2.6e-48 196.1 119 75.6
CARHR111830 Cardamine hirsuta HOM05D005689 ORTHO05D007060 2.6e-48 196.1 113 81.4
ATR0315G041 Amborella trichopoda HOM05D005689 ORTHO05D007060 4.4e-48 195.3 117 78.6
SalBow1G8746 Salvia bowleyana HOM05D005689 ORTHO05D007060 9.9e-48 194.1 126 74.6
SEGI_29883 Sequoiadendron giganteum HOM05D005689 ORTHO05D007060 1.3e-47 193.7 119 76.5
Nitab4.5_0000283g0450 Nicotiana tabacum HOM05D005689 ORTHO05D007060 3.7e-47 192.2 132 72.7
Sp7g37220 Schrenkiella parvula HOM05D005689 ORTHO05D007060 1.9e-46 189.9 119 76.5
SalBow5G0288 Salvia bowleyana HOM05D005689 ORTHO05D007060 5.4e-46 188.3 149 63.8
SalBow5G2226 Salvia bowleyana HOM05D005689 ORTHO05D007060 5.4e-46 188.3 149 63.8
Oeu019918.2 Olea europaea HOM05D005689 ORTHO05D007060 9.2e-46 187.6 148 64.9
Mapoly0010s0009 Marchantia polymorpha HOM05D005689 ORTHO05D007060 6.6e-44 181.4 117 70.1
BcaC07g41184 Brassica carinata HOM05D005689 ORTHO05D007060 1.1e-43 180.6 122 72.1
Sabra09G0106300 Salix brachista HOM05D005689 ORTHO05D007060 4.3e-43 178.7 186 53.2
arahy.Tifrunner.gnm1.ann1.9U6RFS Arachis hypogaea HOM05D005689 ORTHO05D007060 2.4e-41 172.9 183 52.5
Pp3c13_19460 Physcomitrium patens HOM05D005689 ORTHO05D007060 6.8e-41 171.4 117 65.8
Sed0010745 Sechium edule HOM05D005689 ORTHO05D007060 8.9e-41 171.0 119 70.6
Nitab4.5_0000079g0270 Nicotiana tabacum HOM05D005689 ORTHO05D007060 9.9e-40 167.5 94 83.0
CBR_g33926 Chara braunii HOM05D000604 ORTHO05D004856 2.2e-39 166.4 119 63.0
Pp3c12_10830 Physcomitrium patens HOM05D005689 ORTHO05D007060 1.4e-38 163.7 119 63.0
SGA_v2.0_scaffold80G25838 Striga asiatica HOM05D005689 ORTHO05D007060 9.2e-38 161.0 144 59.0
SMO228G0084 Selaginella moellendorffii HOM05D005689 ORTHO05D007060 1.6e-37 160.2 119 60.5
Nn6g31939 Nelumbo nucifera HOM05D005689 ORTHO05D007060 3.6e-34 149.1 80 85.0
arahy.Tifrunner.gnm1.ann1.B1HGXN Arachis hypogaea HOM05D005689 ORTHO05D007060 2.4e-33 146.4 80 85.0
Potri.004G176500 Populus trichocarpa HOM05D005689 ORTHO05D007060 4.4e-32 142.1 115 62.6
Rhsim11G0192800 Rhododendron simsii HOM05D005689 ORTHO05D007060 2.4e-22 109.8 69 75.4
Cre03.g165650 Chlamydomonas reinhardtii HOM05D005689 ORTHO05D007060 7.1e-22 108.2 134 45.5
AUR62017814 Chenopodium quinoa HOM05D005689 ORTHO05D007060 3.9e-20 102.4 69 71.0
AUR62003497 Chenopodium quinoa HOM05D005689 ORTHO05D007060 8.7e-20 101.3 69 69.6
RcHm_v2.0_Chr4g0392001 Rosa chinensis HOM05D005689 ORTHO05D007060 8.7e-20 101.3 133 45.9
Oeu028973.1 Olea europaea HOM05D005689 ORTHO05D007060 1.9e-19 100.1 66 69.7
SGA_v2.0_scaffold199G41205 Striga asiatica HOM05D005689 ORTHO05D007060 2.1e-10 70.1 54 59.3
MCO02G011 Micromonas commoda HOM05D005689 ORTHO05D007060 4.0e-09 65.9 151 31.8
PRCOL_00005825 Prasinoderma coloniale HOM05D005689 ORTHO05D007060 3.8e-07 59.3 101 35.6


User provided reference genes

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