Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_007150 Vanilla planifolia HOM05D000265 ORTHO05D022501 2.8e-59 231.9 127 100.0
Actinidia07979 Actinidia chinensis HOM05D000265 ORTHO05D000161 3.7e-11 72.0 128 40.6
Actinidia20257 Actinidia chinensis HOM05D000265 ORTHO05D000161 4.8e-11 71.6 106 43.4
VMungo0720G0835 Vigna mungo HOM05D000265 ORTHO05D000161 8.2e-11 70.9 127 35.4
Actinidia28107 Actinidia chinensis HOM05D000265 ORTHO05D000161 2.4e-10 69.3 120 40.0
MD14G1135900 Malus domestica HOM05D000265 ORTHO05D000161 3.1e-10 68.9 112 42.9
Migut.B01896 Erythranthe guttata HOM05D000265 ORTHO05D000161 4.1e-10 68.6 109 42.2
RcHm_v2.0_Chr1g0360401 Rosa chinensis HOM05D000265 ORTHO05D000161 4.1e-10 68.6 101 46.5
MD06G1114500 Malus domestica HOM05D000265 ORTHO05D000161 6.9e-10 67.8 113 40.7
RcHm_v2.0_Chr3g0450291 Rosa chinensis HOM05D000265 ORTHO05D022501 6.9e-10 67.8 107 42.1
Dinv11458 Davidia involucrata HOM05D000265 ORTHO05D000161 9.1e-10 67.4 126 38.1
FAN08G2854 Fragaria x ananassa HOM05D000265 ORTHO05D000161 9.1e-10 67.4 107 41.1
Cpa.g.sc96.62 Carica papaya HOM05D000265 ORTHO05D000161 1.2e-09 67.0 131 35.9
Thecc.03G223800 Theobroma cacao HOM05D000265 ORTHO05D000161 1.2e-09 67.0 125 37.6
Migut.N01530 Erythranthe guttata HOM05D000265 ORTHO05D000161 1.5e-09 66.6 106 39.6
Glyma.20G216800 Glycine max HOM05D000265 ORTHO05D000161 1.5e-09 66.6 132 34.1
Hma1.2p1_2584F.1_g324870 Hydrangea macrophylla HOM05D000265 ORTHO05D000161 1.5e-09 66.6 116 37.9
RcHm_v2.0_Chr7g0186561 Rosa chinensis HOM05D000265 ORTHO05D000161 2.0e-09 66.2 107 40.2
Atru.chr5.711 Acer truncatum HOM05D000265 ORTHO05D000161 2.6e-09 65.9 126 36.5
FAN07G0636 Fragaria x ananassa HOM05D000265 ORTHO05D000161 2.6e-09 65.9 107 40.2
FAN17G1963 Fragaria x ananassa HOM05D000265 ORTHO05D000161 2.6e-09 65.9 107 40.2
FAN22G1247 Fragaria x ananassa HOM05D000265 ORTHO05D000161 2.6e-09 65.9 107 40.2
Prupe.5G127200 Prunus persica HOM05D000265 ORTHO05D000161 2.6e-09 65.9 109 43.1
Dinv06546 Davidia involucrata HOM05D000265 ORTHO05D000161 3.4e-09 65.5 129 37.2
TAR375G0857 Trochodendron aralioides HOM05D000265 ORTHO05D000161 3.4e-09 65.5 111 43.2
Aqoxy7G00040 Aquilegia oxysepala HOM05D000265 ORTHO05D000161 4.5e-09 65.1 113 36.3
FAN04G1155 Fragaria x ananassa HOM05D000265 ORTHO05D000161 4.5e-09 65.1 107 40.2
Hma1.2p1_0101F.1_g049110 Hydrangea macrophylla HOM05D000265 ORTHO05D000161 4.5e-09 65.1 109 40.4
MBI04_g36398_MAGBIO Magnolia biondii HOM05D000265 ORTHO05D000161 4.5e-09 65.1 105 38.1
MD14G1135700 Malus domestica HOM05D000265 ORTHO05D000161 4.5e-09 65.1 112 42.0
Rhsim01G0175400 Rhododendron simsii HOM05D000265 ORTHO05D000161 5.9e-09 64.7 122 37.7
Potri.001G085900 Populus trichocarpa HOM05D000265 ORTHO05D000161 7.7e-09 64.3 123 37.4
Potri.003G145000 Populus trichocarpa HOM05D000265 ORTHO05D000161 7.7e-09 64.3 126 34.9
AL6G52470 Arabidopsis lyrata HOM05D000265 ORTHO05D000161 1.0e-08 63.9 113 44.2
Carub.0006s3597 Capsella rubella HOM05D000265 ORTHO05D000161 1.0e-08 63.9 108 42.6
BcaB01g02297 Brassica carinata HOM05D000265 ORTHO05D000161 1.3e-08 63.5 110 40.9
CARHR249410 Cardamine hirsuta HOM05D000265 ORTHO05D000161 1.3e-08 63.5 109 43.1
FvH4_5g11291 Fragaria vesca HOM05D000265 ORTHO05D000161 1.3e-08 63.5 107 40.2
FAN18G0891 Fragaria x ananassa HOM05D000265 ORTHO05D000161 1.3e-08 63.5 107 40.2
FAN18G1545 Fragaria x ananassa HOM05D000265 ORTHO05D000161 1.3e-08 63.5 107 40.2
SalBow3G3042 Salvia bowleyana HOM05D000265 ORTHO05D000161 1.3e-08 63.5 124 40.3
AT4G00910 Arabidopsis thaliana HOM05D000265 ORTHO05D000161 1.7e-08 63.2 113 42.5
Haze_09142 Corylus avellana HOM05D000265 ORTHO05D000161 1.7e-08 63.2 116 38.8
FvH4_4g16071 Fragaria vesca HOM05D000265 ORTHO05D000161 1.7e-08 63.2 107 39.3
FAN12G0169 Fragaria x ananassa HOM05D000265 ORTHO05D000161 1.7e-08 63.2 107 39.3
PSO384G1412 Papaver somniferum HOM05D000265 ORTHO05D000161 1.7e-08 63.2 108 42.6
Sp6g01200 Schrenkiella parvula HOM05D000265 ORTHO05D000161 1.7e-08 63.2 109 42.2
vmacro04287 Vaccinium macrocarpon HOM05D000265 ORTHO05D000161 1.7e-08 63.2 121 38.8
vmacro11518 Vaccinium macrocarpon HOM05D000265 ORTHO05D000161 1.7e-08 63.2 108 38.9
Glyma.10G173400 Glycine max HOM05D000265 ORTHO05D000161 2.2e-08 62.8 130 31.5
Manes.02G004700 Manihot esculenta HOM05D000265 ORTHO05D000161 2.2e-08 62.8 113 38.9
Sabra01G0062200 Salix brachista HOM05D000265 ORTHO05D000161 2.2e-08 62.8 127 33.1
SalBow3G1339 Salvia bowleyana HOM05D000265 ORTHO05D000161 2.2e-08 62.8 109 40.4
DCAR_008671 Daucus carota HOM05D000265 ORTHO05D000161 2.9e-08 62.4 108 40.7
Duzib068G1065 Durio zibethinus HOM05D000265 ORTHO05D000161 2.9e-08 62.4 108 37.0
FAN06G3438 Fragaria x ananassa HOM05D000265 ORTHO05D000161 2.9e-08 62.4 100 42.0
Sabra03G0105500 Salix brachista HOM05D000265 ORTHO05D000161 2.9e-08 62.4 127 35.4
CSS0039914 Camellia sinensis var. sinensis HOM05D000265 ORTHO05D000161 3.8e-08 62.0 110 38.2
MD07G1153600 Malus domestica HOM05D000265 ORTHO05D000161 3.8e-08 62.0 116 36.2
Rhsim07G0002500 Rhododendron simsii HOM05D000265 ORTHO05D000161 3.8e-08 62.0 127 39.4
CANSAT21G0281 Cannabis sativa HOM05D000265 ORTHO05D000161 5.0e-08 61.6 126 34.9
PSO368G0002 Papaver somniferum HOM05D000265 ORTHO05D022501 5.0e-08 61.6 112 36.6
PSO782G2837 Papaver somniferum HOM05D000265 ORTHO05D000161 5.0e-08 61.6 112 36.6
TPR.G7827 Trifolium pratense HOM05D000265 ORTHO05D000161 5.0e-08 61.6 127 36.2
TAR629G0965 Trochodendron aralioides HOM05D000265 ORTHO05D000813 6.5e-08 61.2 114 40.4
MBI12_g20257_MAGBIO Magnolia biondii HOM05D000265 ORTHO05D000161 8.5e-08 60.8 110 41.8
Phvul.L005901 Phaseolus vulgaris HOM05D000265 ORTHO05D000161 8.5e-08 60.8 128 32.8
Aa31LG5G1010 Aethionema arabicum HOM05D000265 ORTHO05D000161 1.1e-07 60.5 107 40.2
CiPaw.01G078500 Carya illinoinensis HOM05D000265 ORTHO05D000161 1.1e-07 60.5 111 40.5
CiPaw.12G078900 Carya illinoinensis HOM05D000265 ORTHO05D000161 1.1e-07 60.5 128 37.5
Thhalv10028612m.g Eutrema salsugineum HOM05D000265 ORTHO05D000161 1.1e-07 60.5 109 41.3
Nitab4.5_0005042g0010 Nicotiana tabacum HOM05D000265 ORTHO05D000161 1.1e-07 60.5 110 39.1
ClCG06G002690 Citrullus lanatus HOM05D000265 ORTHO05D000161 1.4e-07 60.1 104 35.6
MELO3C022258.2 Cucumis melo HOM05D000265 ORTHO05D000161 1.4e-07 60.1 114 36.8
Gohir.D03G086300 Gossypium hirsutum HOM05D000265 ORTHO05D000161 1.4e-07 60.1 108 34.3
Nitab4.5_0000307g0020 Nicotiana tabacum HOM05D000265 ORTHO05D000161 1.4e-07 60.1 113 37.2
FAN06G2189 Fragaria x ananassa HOM05D000265 ORTHO05D000161 1.9e-07 59.7 100 41.0
FAN10G1523 Fragaria x ananassa HOM05D000265 ORTHO05D000161 1.9e-07 59.7 100 41.0
FAN10G2887 Fragaria x ananassa HOM05D000265 ORTHO05D000161 1.9e-07 59.7 100 41.0
Gohir.A08G081200 Gossypium hirsutum HOM05D000265 ORTHO05D000161 1.9e-07 59.7 110 37.3
Potri.002G174600 Populus trichocarpa HOM05D000265 ORTHO05D000161 1.9e-07 59.7 122 35.2
C09p01000 Brassica napus HOM05D000265 ORTHO05D000161 2.5e-07 59.3 106 40.6
BolC9t53033H Brassica oleracea HOM05D000265 ORTHO05D000161 2.5e-07 59.3 106 40.6
AUR62022733 Chenopodium quinoa HOM05D000265 ORTHO05D000161 2.5e-07 59.3 128 33.6
COL.COLO4_06240 Corchorus olitorius HOM05D000265 ORTHO05D000161 2.5e-07 59.3 132 36.4
Duzib084G1203 Durio zibethinus HOM05D000265 ORTHO05D000161 2.5e-07 59.3 132 34.1
Gorai.003G075900 Gossypium raimondii HOM05D000265 ORTHO05D000161 2.5e-07 59.3 108 34.3
Lalb_Chr06g0168631 Lupinus albus HOM05D000265 ORTHO05D000161 2.5e-07 59.3 122 30.3
Oeu007874.1 Olea europaea HOM05D000265 ORTHO05D000161 2.5e-07 59.3 106 34.9
THA.LOC104825888 Tarenaya hassleriana HOM05D000265 ORTHO05D000161 2.5e-07 59.3 106 42.5
C03p38740 Brassica napus HOM05D000265 ORTHO05D000161 3.2e-07 58.9 106 40.6
BolC3t16148H Brassica oleracea HOM05D000265 ORTHO05D000161 3.2e-07 58.9 106 40.6
FAN01G0319 Fragaria x ananassa HOM05D000265 ORTHO05D000161 3.2e-07 58.9 100 40.0
Gohir.D08G123700 Gossypium hirsutum HOM05D000265 ORTHO05D000161 3.2e-07 58.9 110 37.3
Lalb_Chr02g0149651 Lupinus albus HOM05D000265 ORTHO05D000161 3.2e-07 58.9 114 34.2
THA.LOC104816090 Tarenaya hassleriana HOM05D000265 ORTHO05D000161 3.2e-07 58.9 100 41.0
CiPaw.11G114500 Carya illinoinensis HOM05D000265 ORTHO05D000161 4.2e-07 58.5 113 35.4
Nn3g18915 Nelumbo nucifera HOM05D000265 ORTHO05D000161 4.2e-07 58.5 125 32.8
QL08p046019 Quercus lobata HOM05D000265 ORTHO05D000161 4.2e-07 58.5 110 40.0
A02p24360 Brassica napus HOM05D000265 ORTHO05D000161 7.2e-07 57.8 106 39.6
A09p00910 Brassica napus HOM05D000265 ORTHO05D000161 7.2e-07 57.8 107 39.3
BraA02t07426Z Brassica rapa HOM05D000265 ORTHO05D000161 7.2e-07 57.8 106 39.6
AUR62004522 Chenopodium quinoa HOM05D000265 ORTHO05D000161 7.2e-07 57.8 127 33.1
FAN03G0626 Fragaria x ananassa HOM05D000265 ORTHO05D000161 7.2e-07 57.8 120 35.8
Gohir.A02G097302 Gossypium hirsutum HOM05D000265 ORTHO05D000161 7.2e-07 57.8 108 34.3
Hma1.2p1_0440F.1_g153700 Hydrangea macrophylla HOM05D000265 ORTHO05D000161 7.2e-07 57.8 106 37.7
Rhsim02G0250600 Rhododendron simsii HOM05D000265 ORTHO05D000161 7.2e-07 57.8 110 38.2
Lj8C202G4 Lonicera japonica HOM05D000265 ORTHO05D000161 9.4e-07 57.4 108 38.0
Lj5g0003325 Lotus japonicus HOM05D000265 ORTHO05D000161 9.4e-07 57.4 106 35.8
MBI04_g06932_MAGBIO Magnolia biondii HOM05D000265 ORTHO05D000161 9.4e-07 57.4 108 38.0
Psat6g053720 Pisum sativum HOM05D000265 ORTHO05D000161 9.4e-07 57.4 128 31.2
BcaC04g24111 Brassica carinata HOM05D000265 ORTHO05D000161 1.2e-06 57.0 106 39.6
Nitab4.5_0006770g0060 Nicotiana tabacum HOM05D000265 ORTHO05D000161 1.2e-06 57.0 113 37.2
Oeu043219.1 Olea europaea HOM05D000265 ORTHO05D000161 1.2e-06 57.0 108 37.0
Lj7C496T6 Lonicera japonica HOM05D000265 ORTHO05D000161 1.6e-06 56.6 110 35.5
MBI04_g06934_MAGBIO Magnolia biondii HOM05D000265 ORTHO05D000161 1.6e-06 56.6 111 36.0
Medtr1g077660 Medicago truncatula HOM05D000265 ORTHO05D000161 1.6e-06 56.6 127 33.1
BcaB05g23968 Brassica carinata HOM05D000265 ORTHO05D000161 2.1e-06 56.2 109 39.4
C02p38410 Brassica napus HOM05D000265 ORTHO05D000161 2.1e-06 56.2 106 39.6
BraA09t35762Z Brassica rapa HOM05D000265 ORTHO05D000161 2.1e-06 56.2 107 39.3
HanXRQChr17g0534451 Helianthus annuus HOM05D000265 ORTHO05D000161 2.1e-06 56.2 123 34.1
PSO135G0402 Papaver somniferum HOM05D000265 ORTHO05D000161 2.1e-06 56.2 131 36.6
Prupe.2G192500 Prunus persica HOM05D000265 ORTHO05D000161 2.1e-06 56.2 123 35.8
GSVIVG01027186001 Vitis vinifera HOM05D000265 ORTHO05D000161 2.1e-06 56.2 107 39.3
Gohir.A07G136100 Gossypium hirsutum HOM05D000265 ORTHO05D000161 2.7e-06 55.8 132 34.1
PGR042G1631 Punica granatum HOM05D000265 ORTHO05D000161 2.7e-06 55.8 111 41.4
PGSC0003DMG400000121 Solanum tuberosum HOM05D000265 ORTHO05D000161 2.7e-06 55.8 113 38.1
GSVIVG01019627001 Vitis vinifera HOM05D000265 ORTHO05D000161 2.7e-06 55.8 106 38.7
MBI04_g36396_MAGBIO Magnolia biondii HOM05D000265 ORTHO05D000161 3.6e-06 55.5 121 34.7
Manes.01G243800 Manihot esculenta HOM05D000265 ORTHO05D000161 3.6e-06 55.5 127 36.2
QL02p028970 Quercus lobata HOM05D000265 ORTHO05D000161 3.6e-06 55.5 112 35.7
BcaC03g16080 Brassica carinata HOM05D000265 ORTHO05D000161 4.7e-06 55.1 106 38.7
BolC2t09858H Brassica oleracea HOM05D000265 ORTHO05D000161 4.7e-06 55.1 106 38.7
CsaV3_6G008820 Cucumis sativus L. HOM05D000265 ORTHO05D000161 4.7e-06 55.1 108 32.4
Peaxi162Scf00345g00029 Petunia axillaris HOM05D000265 ORTHO05D000161 4.7e-06 55.1 113 34.5
Solyc01g096140.3 Solanum lycopersicum HOM05D000265 ORTHO05D000161 6.1e-06 54.7 113 36.3
Cc00_g23280 Coffea canephora HOM05D000265 ORTHO05D000161 7.9e-06 54.3 118 33.1
Gorai.004G130400 Gossypium raimondii HOM05D000265 ORTHO05D000161 7.9e-06 54.3 110 35.5


User provided reference genes

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