Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_007141 Vanilla planifolia HOM05D006391 ORTHO05D007767 2.0e-68 262.3 130 100.0
HPP92_007146 Vanilla planifolia HOM05D006391 ORTHO05D007767 1.2e-41 173.3 88 97.7
Nn1g02693 Nelumbo nucifera HOM05D006391 ORTHO05D007767 1.4e-37 159.8 88 85.2
Lj2A39G66 Lonicera japonica HOM05D006391 ORTHO05D007767 2.0e-36 156.0 88 84.1
Cc02_g09040 Coffea canephora HOM05D006391 ORTHO05D007767 1.7e-35 152.9 88 84.1
CiPaw.07G078100 Carya illinoinensis HOM05D006391 ORTHO05D007767 2.2e-35 152.5 88 80.7
Sed0020342 Sechium edule HOM05D006391 ORTHO05D007767 2.2e-35 152.5 88 81.8
Sed0023982 Sechium edule HOM05D006391 ORTHO05D007767 2.2e-35 152.5 88 81.8
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 2.2e-35 152.5 87 81.6
ATR0680G180 Amborella trichopoda HOM05D006391 ORTHO05D007767 2.9e-35 152.1 87 81.6
CsaV3_1G045530 Cucumis sativus L. HOM05D006391 ORTHO05D007767 2.9e-35 152.1 88 80.7
MBI17_g17506_MAGBIO Magnolia biondii HOM05D006391 ORTHO05D007767 6.4e-35 151.0 87 83.9
FAN05G1344 Fragaria x ananassa HOM05D006391 ORTHO05D007767 8.3e-35 150.6 88 81.8
FAN05G3173 Fragaria x ananassa HOM05D006391 ORTHO05D007767 8.3e-35 150.6 88 81.8
Gohir.A11G251400 Gossypium hirsutum HOM05D006391 ORTHO05D007767 8.3e-35 150.6 88 79.5
Atru.chr2.892 Acer truncatum HOM05D006391 ORTHO05D007767 1.1e-34 150.2 88 79.5
GSVIVG01036208001 Vitis vinifera HOM05D006391 ORTHO05D007767 1.1e-34 150.2 88 83.0
Oeu034581.1 Olea europaea HOM05D006391 ORTHO05D007767 1.4e-34 149.8 88 79.5
Ca_10006_v3 Cicer arietinum L. HOM05D006391 ORTHO05D007767 1.9e-34 149.4 88 79.5
Eucgr.H04256 Eucalyptus grandis HOM05D006391 ORTHO05D007767 1.9e-34 149.4 88 79.5
FvH4_6g02310 Fragaria vesca HOM05D006391 ORTHO05D007767 2.4e-34 149.1 88 80.7
FAN09G3726 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.4e-34 149.1 88 80.7
FAN14G3605 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.4e-34 149.1 88 80.7
FAN14G5548 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.4e-34 149.1 88 80.7
Gorai.007G280500 Gossypium raimondii HOM05D006391 ORTHO05D007767 2.4e-34 149.1 88 78.4
PGR004G0019 Punica granatum HOM05D006391 ORTHO05D007767 2.4e-34 149.1 88 79.5
Duzib177G0389 Durio zibethinus HOM05D006391 ORTHO05D007767 3.2e-34 148.7 88 78.4
Potri.013G044600 Populus trichocarpa HOM05D006391 ORTHO05D007767 5.4e-34 147.9 88 80.7
QL03p031977 Quercus lobata HOM05D006391 ORTHO05D007767 5.4e-34 147.9 87 78.2
Aa31LG5G14980 Aethionema arabicum HOM05D006391 ORTHO05D007767 7.0e-34 147.5 88 76.1
FAN02G0817 Fragaria x ananassa HOM05D006391 ORTHO05D007767 7.0e-34 147.5 88 79.5
CDE04G1237 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 9.2e-34 147.1 87 80.5
DCAR_028379 Daucus carota HOM05D006391 ORTHO05D007767 9.2e-34 147.1 88 81.8
Gohir.D11G261800 Gossypium hirsutum HOM05D006391 ORTHO05D007767 9.2e-34 147.1 88 78.4
unitig_32.g11831 Utricularia gibba HOM05D006391 ORTHO05D007767 9.2e-34 147.1 88 78.4
Glyma.10G167000 Glycine max HOM05D006391 ORTHO05D007767 1.2e-33 146.7 88 78.4
Glyma.20G222100 Glycine max HOM05D006391 ORTHO05D007767 1.2e-33 146.7 88 78.4
Prupe.6G348300 Prunus persica HOM05D006391 ORTHO05D007767 1.2e-33 146.7 88 79.5
RcHm_v2.0_Chr3g0450061 Rosa chinensis HOM05D006391 ORTHO05D007767 1.2e-33 146.7 88 79.5
vmacro20003 Vaccinium macrocarpon HOM05D006391 ORTHO05D007767 1.2e-33 146.7 89 80.9
Lj5g0002062 Lotus japonicus HOM05D006391 ORTHO05D007767 1.6e-33 146.4 88 79.5
Sabra13G0041000 Salix brachista HOM05D006391 ORTHO05D007767 1.6e-33 146.4 88 79.5
VMungo0720G1212 Vigna mungo HOM05D006391 ORTHO05D007767 1.6e-33 146.4 88 78.4
Actinidia06783 Actinidia chinensis HOM05D006391 ORTHO05D007767 2.1e-33 146.0 88 78.4
ClCG06G009350 Citrullus lanatus HOM05D006391 ORTHO05D007767 2.1e-33 146.0 88 77.3
TWI56G1126 Tripterygium wilfordii HOM05D006391 ORTHO05D007767 2.1e-33 146.0 88 78.4
Peaxi162Scf00120g00213 Petunia axillaris HOM05D006391 ORTHO05D007767 2.7e-33 145.6 88 76.1
Phvul.L001863 Phaseolus vulgaris HOM05D006391 ORTHO05D007767 2.7e-33 145.6 88 78.4
Rhsim05G0175400 Rhododendron simsii HOM05D006391 ORTHO05D007767 2.7e-33 145.6 89 79.8
Ciclev10020524m.g Citrus clementina HOM05D006391 ORTHO05D007767 3.5e-33 145.2 88 80.7
Manes.08G137500 Manihot esculenta HOM05D006391 ORTHO05D007767 4.6e-33 144.8 88 77.3
Os02g0820600 Oryza sativa ssp. japonica HOM05D006391 ORTHO05D007767 4.6e-33 144.8 87 80.5
Thecc.05G276300 Theobroma cacao HOM05D006391 ORTHO05D007767 4.6e-33 144.8 88 77.3
TPR.G10279 Trifolium pratense HOM05D006391 ORTHO05D007767 4.6e-33 144.8 88 78.4
arahy.Tifrunner.gnm1.ann1.DTTE32 Arachis hypogaea HOM05D006391 ORTHO05D007767 6.0e-33 144.4 88 79.5
SalBow3G3308 Salvia bowleyana HOM05D006391 ORTHO05D007767 6.0e-33 144.4 88 77.3
COL.COLO4_15424 Corchorus olitorius HOM05D006391 ORTHO05D007767 7.8e-33 144.1 88 76.1
MELO3C024661.2 Cucumis melo HOM05D006391 ORTHO05D007767 7.8e-33 144.1 85 78.8
arahy.Tifrunner.gnm1.ann1.9EWV20 Arachis hypogaea HOM05D006391 ORTHO05D007767 1.0e-32 143.7 88 78.4
Haze_04461 Corylus avellana HOM05D006391 ORTHO05D007767 1.3e-32 143.3 88 76.1
Thhalv10020805m.g Eutrema salsugineum HOM05D006391 ORTHO05D007767 1.3e-32 143.3 88 76.1
Lalb_Chr21g0311261 Lupinus albus HOM05D006391 ORTHO05D007767 1.7e-32 142.9 88 78.4
MD12G1245500 Malus domestica HOM05D006391 ORTHO05D007767 1.7e-32 142.9 88 77.3
AL3G14580 Arabidopsis lyrata HOM05D006391 ORTHO05D007767 2.3e-32 142.5 88 76.1
AT3G04560 Arabidopsis thaliana HOM05D006391 ORTHO05D007767 2.3e-32 142.5 88 76.1
Carub.0003s0371 Capsella rubella HOM05D006391 ORTHO05D007767 2.3e-32 142.5 88 76.1
Cfa006327 Carpinus fangiana HOM05D006391 ORTHO05D007767 2.3e-32 142.5 88 76.1
Solyc11g006080.2 Solanum lycopersicum HOM05D006391 ORTHO05D007767 2.3e-32 142.5 88 76.1
Sopen11g002020 Solanum pennellii HOM05D006391 ORTHO05D007767 2.3e-32 142.5 88 76.1
PGSC0003DMG400028690 Solanum tuberosum HOM05D006391 ORTHO05D007767 2.3e-32 142.5 88 76.1
Aqoxy5G00275 Aquilegia oxysepala HOM05D006391 ORTHO05D007767 3.0e-32 142.1 88 80.7
THA.LOC104827288 Tarenaya hassleriana HOM05D006391 ORTHO05D007767 3.0e-32 142.1 88 76.1
BcaC05g30188 Brassica carinata HOM05D006391 ORTHO05D007767 3.9e-32 141.7 88 75.0
CANSAT54G0018 Cannabis sativa HOM05D006391 ORTHO05D007767 3.9e-32 141.7 88 76.1
Medtr1g079830 Medicago truncatula HOM05D006391 ORTHO05D007767 3.9e-32 141.7 88 76.1
BcaC05g29933 Brassica carinata HOM05D006391 ORTHO05D007767 5.1e-32 141.4 88 76.1
C05p62710 Brassica napus HOM05D006391 ORTHO05D007767 5.1e-32 141.4 88 76.1
BolC5t34924H Brassica oleracea HOM05D006391 ORTHO05D007767 5.1e-32 141.4 88 76.1
Migut.F00812 Erythranthe guttata HOM05D006391 ORTHO05D007767 5.1e-32 141.4 88 76.1
MD04G1228400 Malus domestica HOM05D006391 ORTHO05D007767 6.6e-32 141.0 88 77.3
Sp3g03400 Schrenkiella parvula HOM05D006391 ORTHO05D007767 6.6e-32 141.0 88 75.0
Sc09g0004120 Simmondsia chinensis HOM05D006391 ORTHO05D007767 6.6e-32 141.0 88 73.9
HanXRQChr08g0225371 Helianthus annuus HOM05D006391 ORTHO05D007767 8.6e-32 140.6 88 77.3
Dinv14621 Davidia involucrata HOM05D006391 ORTHO05D007767 1.1e-31 140.2 86 80.2
A05p42930 Brassica napus HOM05D006391 ORTHO05D007767 1.5e-31 139.8 88 75.0
BraA05t23038Z Brassica rapa HOM05D006391 ORTHO05D007767 1.5e-31 139.8 88 75.0
CAN.G582.18 Capsicum annuum HOM05D006391 ORTHO05D007767 2.5e-31 139.0 88 72.7
ECA233G2464 Erigeron canadensis HOM05D006391 ORTHO05D007767 2.5e-31 139.0 88 76.1
PSO832G3851 Papaver somniferum HOM05D006391 ORTHO05D007767 2.5e-31 139.0 88 78.4
Nitab4.5_0000856g0160 Nicotiana tabacum HOM05D006391 ORTHO05D007767 3.3e-31 138.7 88 73.9
SEGI_17356 Sequoiadendron giganteum HOM05D006391 ORTHO05D007767 3.3e-31 138.7 87 77.0
CARHR078730 Cardamine hirsuta HOM05D006391 ORTHO05D007767 4.3e-31 138.3 88 73.9
Lsat_1_v5_gn_8_2721 Lactuca sativa HOM05D006391 ORTHO05D007767 4.3e-31 138.3 88 76.1
PSO210G7203 Papaver somniferum HOM05D006391 ORTHO05D007767 4.3e-31 138.3 88 77.3
Nitab4.5_0004928g0020 Nicotiana tabacum HOM05D006391 ORTHO05D007767 9.5e-31 137.1 88 73.9
Zm00001eb259140 Zea mays HOM05D006391 ORTHO05D007767 9.5e-31 137.1 87 78.2
AUR62004876 Chenopodium quinoa HOM05D006391 ORTHO05D007767 1.6e-30 136.3 88 75.0
EL10Ac4g09055 Beta vulgaris HOM05D006391 ORTHO05D007767 3.6e-30 135.2 86 74.4
AUR62001083 Chenopodium quinoa HOM05D006391 ORTHO05D007767 1.1e-29 133.7 88 73.9
AUR62037609 Chenopodium quinoa HOM05D006391 ORTHO05D007767 1.1e-29 133.7 88 73.9
Hund22148 Selenicereus undatus HOM05D006391 ORTHO05D007767 3.4e-28 128.6 80 77.5
Mapoly0044s0074 Marchantia polymorpha HOM05D006391 ORTHO05D007767 2.4e-26 122.5 87 65.5
Sed0026137 Sechium edule HOM05D006391 ORTHO05D007767 1.3e-24 116.7 88 69.3
Pp3c19_8680 Physcomitrium patens HOM05D006391 ORTHO05D007767 8.6e-24 114.0 87 62.1
SMO203G0061 Selaginella moellendorffii HOM05D006391 ORTHO05D007767 4.3e-23 111.7 101 56.4
CSS0020771 Camellia sinensis var. sinensis HOM05D006391 ORTHO05D007767 2.4e-21 105.9 88 62.5
Ah.04g163310 Amaranthus hybridus HOM05D006391 ORTHO05D007767 6.8e-21 104.4 70 72.9
SGA_v2.0_scaffold243G44310 Striga asiatica HOM05D006391 ORTHO05D007767 2.6e-20 102.4 60 81.7
CBR_g8309 Chara braunii HOM05D006391 ORTHO05D007767 8.7e-16 87.4 101 48.5


User provided reference genes

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