Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_006921 Vanilla planifolia HOM05D002674 ORTHO05D007700 1.1e-124 449.9 217 100.0
HPP92_025205 Vanilla planifolia HOM05D002674 ORTHO05D007700 2.3e-77 292.7 223 68.6
CDE11G0633 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 9.0e-42 174.5 213 49.8
TAR365G1234 Trochodendron aralioides HOM05D002674 ORTHO05D007700 3.8e-40 169.1 238 47.5
Actinidia24347 Actinidia chinensis HOM05D002674 ORTHO05D007700 4.6e-38 162.2 229 47.2
CDE05G2513 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 4.6e-38 162.2 213 47.9
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 5.1e-37 158.7 238 44.1
MBI19_g25354_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D007700 1.1e-36 157.5 243 45.7
Potri.014G129500 Populus trichocarpa HOM05D002674 ORTHO05D007700 7.4e-36 154.8 227 47.6
ClCG10G010900 Citrullus lanatus HOM05D002674 ORTHO05D007700 1.3e-35 154.1 234 44.4
FAN27G2781 Fragaria x ananassa HOM05D002674 ORTHO05D007700 1.3e-35 154.1 228 45.6
MELO3C017958.2 Cucumis melo HOM05D002674 ORTHO05D007700 2.4e-34 149.8 233 43.8
CsaV3_4G000780 Cucumis sativus L. HOM05D002674 ORTHO05D007700 2.4e-34 149.8 233 43.8
Aqoxy5G00752 Aquilegia oxysepala HOM05D002674 ORTHO05D007700 9.0e-34 147.9 247 43.3
TAR636G1278 Trochodendron aralioides HOM05D002674 ORTHO05D007700 7.6e-33 144.8 234 44.0
Potri.002G204700 Populus trichocarpa HOM05D002674 ORTHO05D007700 1.3e-32 144.1 234 46.2
Sabra14G0096100 Salix brachista HOM05D002674 ORTHO05D007700 1.7e-32 143.7 228 45.2
Thecc.01G299900 Theobroma cacao HOM05D002674 ORTHO05D007700 6.5e-32 141.7 239 42.3
Glyma.02G018300 Glycine max HOM05D002674 ORTHO05D007700 8.4e-32 141.4 219 43.4
CiPaw.07G108400 Carya illinoinensis HOM05D002674 ORTHO05D007700 1.1e-31 141.0 223 43.5
MD03G1287800 Malus domestica HOM05D002674 ORTHO05D007700 1.4e-31 140.6 238 42.0
Atru.chr5.1151 Acer truncatum HOM05D002674 ORTHO05D007700 2.5e-31 139.8 231 42.0
Nitab4.5_0002470g0100 Nicotiana tabacum HOM05D002674 ORTHO05D007700 2.5e-31 139.8 232 42.2
TWI23G1032 Tripterygium wilfordii HOM05D002674 ORTHO05D007700 2.5e-31 139.8 221 44.3
Prupe.8G261000 Prunus persica HOM05D002674 ORTHO05D007700 5.5e-31 138.7 241 41.1
PSO832G4034 Papaver somniferum HOM05D002674 ORTHO05D007700 1.2e-30 137.5 237 43.5
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 1.6e-30 137.1 238 42.4
Gorai.004G089800 Gossypium raimondii HOM05D002674 ORTHO05D007700 1.6e-30 137.1 237 41.8
Phvul.007G146100 Phaseolus vulgaris HOM05D002674 ORTHO05D007700 1.6e-30 137.1 221 42.5
VMungo0720G0138 Vigna mungo HOM05D002674 ORTHO05D007700 1.6e-30 137.1 220 42.7
Gohir.A08G075900 Gossypium hirsutum HOM05D002674 ORTHO05D007700 2.7e-30 136.3 236 42.8
Psat6g166040 Pisum sativum HOM05D002674 ORTHO05D007700 2.7e-30 136.3 215 44.7
Gohir.D08G085300 Gossypium hirsutum HOM05D002674 ORTHO05D007700 3.5e-30 136.0 237 41.4
Lj1A25T5 Lonicera japonica HOM05D002674 ORTHO05D007700 4.6e-30 135.6 229 42.8
Glyma.10G018600 Glycine max HOM05D002674 ORTHO05D007700 1.0e-29 134.4 221 42.5
Rhsim01G0243300 Rhododendron simsii HOM05D002674 ORTHO05D007700 1.3e-29 134.0 239 41.0
Nitab4.5_0005805g0020 Nicotiana tabacum HOM05D002674 ORTHO05D007700 1.8e-29 133.7 232 41.4
CANSAT25G1821 Cannabis sativa HOM05D002674 ORTHO05D007700 3.0e-29 132.9 235 42.1
Ciclev10021537m.g Citrus clementina HOM05D002674 ORTHO05D007700 3.9e-29 132.5 233 41.6
Cc01_g20810 Coffea canephora HOM05D002674 ORTHO05D007700 5.1e-29 132.1 236 41.5
QL12p028514 Quercus lobata HOM05D002674 ORTHO05D007700 5.1e-29 132.1 255 40.8
COL.COLO4_23350 Corchorus olitorius HOM05D002674 ORTHO05D007700 6.7e-29 131.7 231 40.7
Eucgr.K03478 Eucalyptus grandis HOM05D002674 ORTHO05D007700 6.7e-29 131.7 236 45.3
A02p24720 Brassica napus HOM05D002674 ORTHO05D007700 8.7e-29 131.3 220 44.5
MD11G1310500 Malus domestica HOM05D002674 ORTHO05D007700 1.5e-28 130.6 237 41.4
Sc24g0003790 Simmondsia chinensis HOM05D002674 ORTHO05D007700 1.5e-28 130.6 236 39.8
Sp6g02330 Schrenkiella parvula HOM05D002674 ORTHO05D007700 2.5e-28 129.8 226 46.0
Duzib138G1545 Durio zibethinus HOM05D002674 ORTHO05D007700 3.3e-28 129.4 236 41.1
BcaC03g16124 Brassica carinata HOM05D002674 ORTHO05D007700 4.3e-28 129.0 221 45.2
C02p38980 Brassica napus HOM05D002674 ORTHO05D007700 4.3e-28 129.0 221 45.2
BolC2t09909H Brassica oleracea HOM05D002674 ORTHO05D007700 4.3e-28 129.0 221 45.2
AT4G02425 Arabidopsis thaliana HOM05D002674 ORTHO05D007700 5.7e-28 128.6 231 43.7
Thhalv10028893m.g Eutrema salsugineum HOM05D002674 ORTHO05D007700 7.4e-28 128.3 221 44.8
EL10Ac7g17509 Beta vulgaris HOM05D002674 ORTHO05D007700 9.6e-28 127.9 259 37.8
BraA02t07459Z Brassica rapa HOM05D002674 ORTHO05D007700 9.6e-28 127.9 224 45.5
Manes.01G218600 Manihot esculenta HOM05D002674 ORTHO05D007700 1.3e-27 127.5 233 39.9
Solyc06g009120.3 Solanum lycopersicum HOM05D002674 ORTHO05D007700 1.3e-27 127.5 233 39.1
PGSC0003DMG402017938 Solanum tuberosum HOM05D002674 ORTHO05D007700 1.3e-27 127.5 237 40.1
Sopen06g003880 Solanum pennellii HOM05D002674 ORTHO05D007700 2.1e-27 126.7 231 38.5
THA.LOC104825970 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 2.8e-27 126.3 232 42.7
Sabra02G0154700 Salix brachista HOM05D002674 ORTHO05D008110 6.3e-27 125.2 219 45.7
Nn3g21481 Nelumbo nucifera HOM05D002674 ORTHO05D007700 1.1e-26 124.4 201 43.8
Cfa005916 Carpinus fangiana HOM05D002674 ORTHO05D007700 1.8e-26 123.6 232 39.7
Ca_10339_v3 Cicer arietinum L. HOM05D002674 ORTHO05D007700 2.4e-26 123.2 227 40.5
CSS0000533 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 3.1e-26 122.9 229 38.9
CSS0049735 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 4.1e-26 122.5 227 41.9
Carub.0006s3472 Capsella rubella HOM05D002674 ORTHO05D007700 4.1e-26 122.5 223 44.8
Migut.D00215 Erythranthe guttata HOM05D002674 ORTHO05D007700 5.3e-26 122.1 218 42.2
Medtr1g088580 Medicago truncatula HOM05D002674 ORTHO05D007700 5.3e-26 122.1 219 43.8
Hma1.2p1_0491F.1_g164500 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 2.6e-25 119.8 146 54.1
FAN20G3185 Fragaria x ananassa HOM05D002674 ORTHO05D007700 3.4e-25 119.4 229 40.2
Lj5g0010238 Lotus japonicus HOM05D002674 ORTHO05D007700 3.4e-25 119.4 209 42.1
HanXRQChr10g0284651 Helianthus annuus HOM05D002674 ORTHO05D007700 4.5e-25 119.0 258 39.5
FAN24G1157 Fragaria x ananassa HOM05D002674 ORTHO05D007700 5.9e-25 118.6 229 39.7
FvH4_2g25690 Fragaria vesca HOM05D002674 ORTHO05D007700 7.6e-25 118.2 229 39.7
ATR0796G100 Amborella trichopoda HOM05D002674 ORTHO05D007700 1.7e-24 117.1 222 39.6
RcHm_v2.0_Chr6g0293961 Rosa chinensis HOM05D002674 ORTHO05D007700 2.2e-24 116.7 230 40.9
SGA_v2.0_scaffold1G00369 Striga asiatica HOM05D002674 ORTHO05D007700 2.2e-24 116.7 220 41.4
CARHR250690 Cardamine hirsuta HOM05D002674 ORTHO05D007700 2.9e-24 116.3 229 41.9
vmacro15007 Vaccinium macrocarpon HOM05D002674 ORTHO05D007700 5.0e-24 115.5 239 37.7
FAN15G1012 Fragaria x ananassa HOM05D002674 ORTHO05D007700 8.5e-24 114.8 229 39.3
AL6G50650 Arabidopsis lyrata HOM05D002674 ORTHO05D007700 1.4e-23 114.0 225 41.8
THA.LOC104815928 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 1.9e-23 113.6 226 42.5
Lsat_1_v5_gn_7_11800 Lactuca sativa HOM05D002674 ORTHO05D007700 3.2e-23 112.8 240 39.2
Lsat_1_v5_gn_9_5620 Lactuca sativa HOM05D002674 ORTHO05D007700 3.2e-23 112.8 240 39.2
Carub.0001s0195 Capsella rubella HOM05D002674 ORTHO05D007700 1.2e-22 110.9 226 41.2
Sed0013149 Sechium edule HOM05D002674 ORTHO05D007700 1.2e-22 110.9 218 40.8
Peaxi162Scf00399g00714 Petunia axillaris HOM05D002674 ORTHO05D007700 1.6e-22 110.5 254 38.2
unitig_22.g5241 Utricularia gibba HOM05D002674 ORTHO05D007700 1.6e-22 110.5 205 42.0
Oeu054122.1 Olea europaea HOM05D002674 ORTHO05D007700 2.7e-22 109.8 140 50.7
arahy.Tifrunner.gnm1.ann1.YN8C8B Arachis hypogaea HOM05D002674 ORTHO05D007700 4.6e-22 109.0 231 38.1
arahy.Tifrunner.gnm1.ann1.2P60TQ Arachis hypogaea HOM05D002674 ORTHO05D007700 1.0e-21 107.8 232 38.4
TPR.G34010 Trifolium pratense HOM05D002674 ORTHO05D007700 1.3e-21 107.5 220 36.8
BcaB05g23628 Brassica carinata HOM05D002674 ORTHO05D007700 2.5e-20 103.2 177 46.9
Hund18157 Selenicereus undatus HOM05D002674 ORTHO05D007700 2.5e-20 103.2 239 34.7
Aa31LG1G9740 Aethionema arabicum HOM05D002674 ORTHO05D007700 4.3e-20 102.4 226 40.3
Ah.15g093240 Amaranthus hybridus HOM05D002674 ORTHO05D007700 7.4e-20 101.7 251 35.5
DCAR_002828 Daucus carota HOM05D002674 ORTHO05D007700 1.3e-19 100.9 254 37.8
Lalb_Chr06g0163511 Lupinus albus HOM05D002674 ORTHO05D007700 6.3e-19 98.6 212 37.7
SEGI_12569 Sequoiadendron giganteum HOM05D002674 ORTHO05D007700 3.1e-18 96.3 207 41.1
Aa31LG5G2060 Aethionema arabicum HOM05D002674 ORTHO05D007700 5.9e-17 92.0 228 36.4
AUR62033139 Chenopodium quinoa HOM05D002674 ORTHO05D007700 1.4e-15 87.4 169 41.4
ECA247G3124 Erigeron canadensis HOM05D002674 ORTHO05D007700 4.2e-15 85.9 218 40.4
AUR62008632 Chenopodium quinoa HOM05D002674 ORTHO05D007700 7.9e-14 81.6 137 44.5
Oeu053149.1 Olea europaea HOM05D002674 ORTHO05D007700 1.4e-13 80.9 137 46.0
Zm00001eb127170 Zea mays HOM05D002674 ORTHO05D007700 3.0e-13 79.7 234 37.2
Hma1.2p1_0491F.1_g164510 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 5.1e-13 79.0 110 49.1
Zm00001eb018450 Zea mays HOM05D002674 ORTHO05D007700 1.5e-12 77.4 232 37.1
CANSAT56G3445 Cannabis sativa HOM05D002674 ORTHO05D007700 2.6e-12 76.6 83 55.4
CAN.G1280.1 Capsicum annuum HOM05D002674 ORTHO05D007700 2.6e-12 76.6 237 32.5
Os01g0316500 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D007700 2.4e-10 70.1 232 33.6
BolC6t36475H Brassica oleracea HOM05D000186 ORTHO05D015008 2.5e-07 60.1 82 47.6
BcaC03g16430 Brassica carinata HOM05D002674 ORTHO05D007700 5.5e-07 58.9 73 49.3
BcaB07g32361 Brassica carinata HOM05D002674 ORTHO05D007700 2.1e-06 57.0 84 46.4
Zm00001eb285590 Zea mays HOM05D002674 ORTHO05D007700 2.1e-06 57.0 230 33.0


User provided reference genes

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