Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_006841 Vanilla planifolia HOM05D007582 ORTHO05D009645 3.0e-101 371.7 168 100.0
Zm00001eb348620 Zea mays HOM05D007582 ORTHO05D009645 4.0e-37 158.7 119 63.0
Nn5g28305 Nelumbo nucifera HOM05D007582 ORTHO05D009645 1.5e-36 156.8 121 59.5
TAR381G0802 Trochodendron aralioides HOM05D007582 ORTHO05D009645 2.0e-36 156.4 119 61.3
Dinv07214 Davidia involucrata HOM05D007582 ORTHO05D009645 3.3e-36 155.6 118 60.2
Nn1g00264 Nelumbo nucifera HOM05D007582 ORTHO05D009645 5.7e-36 154.8 121 57.9
Cpa.g.sc64.90 Carica papaya HOM05D007582 ORTHO05D009645 3.7e-35 152.1 121 57.9
Manes.02G163800 Manihot esculenta HOM05D007582 ORTHO05D009645 4.8e-35 151.8 119 58.0
Os05g0435400 Oryza sativa ssp. japonica HOM05D007582 ORTHO05D009645 4.8e-35 151.8 123 62.6
Aqoxy6G00171 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 8.2e-35 151.0 122 59.0
RhsimUnG0092400 Rhododendron simsii HOM05D007582 ORTHO05D009645 2.4e-34 149.4 119 56.3
Oeu028565.1 Olea europaea HOM05D007582 ORTHO05D009645 4.1e-34 148.7 119 59.7
ATR0584G060 Amborella trichopoda HOM05D007582 ORTHO05D009645 5.3e-34 148.3 122 59.8
SHI08583 Sapria himalayana HOM05D007582 ORTHO05D009645 9.1e-34 147.5 119 55.5
MSTRG.22408 Avicennia marina HOM05D007582 ORTHO05D009645 1.2e-33 147.1 119 57.1
QL09p034466 Quercus lobata HOM05D007582 ORTHO05D009645 1.2e-33 147.1 120 56.7
TWI34G1919 Tripterygium wilfordii HOM05D007582 ORTHO05D009645 1.2e-33 147.1 121 57.0
PSO170G1805 Papaver somniferum HOM05D007582 ORTHO05D009645 1.6e-33 146.7 119 59.7
CAN.G1040.1 Capsicum annuum HOM05D007582 ORTHO05D009645 2.0e-33 146.4 119 57.1
CAN.G1040.3 Capsicum annuum HOM05D007582 ORTHO05D009645 2.7e-33 146.0 119 57.1
Nitab4.5_0003719g0010 Nicotiana tabacum HOM05D007582 ORTHO05D009645 2.7e-33 146.0 119 56.3
PSO528G0093 Papaver somniferum HOM05D007582 ORTHO05D009645 3.5e-33 145.6 119 58.8
PGSC0003DMG400041136 Solanum tuberosum HOM05D007582 ORTHO05D009645 3.5e-33 145.6 119 58.0
CSS0038396 Camellia sinensis var. sinensis HOM05D007582 ORTHO05D009645 5.9e-33 144.8 119 54.6
Manes.18G077606 Manihot esculenta HOM05D007582 ORTHO05D009645 5.9e-33 144.8 121 53.7
Solyc06g060300.1 Solanum lycopersicum HOM05D007582 ORTHO05D009645 5.9e-33 144.8 119 58.0
Ciclev10002916m.g Citrus clementina HOM05D007582 ORTHO05D009645 1.0e-32 144.1 120 55.8
Sopen06g020420 Solanum pennellii HOM05D007582 ORTHO05D009645 1.0e-32 144.1 119 58.0
THA.LOC104817375 Tarenaya hassleriana HOM05D007582 ORTHO05D009645 1.0e-32 144.1 119 55.5
Potri.002G083100 Populus trichocarpa HOM05D007582 ORTHO05D009645 1.3e-32 143.7 119 54.6
Peaxi162Scf00051g00105 Petunia axillaris HOM05D007582 ORTHO05D009645 1.7e-32 143.3 115 57.4
vmacro00836 Vaccinium macrocarpon HOM05D007582 ORTHO05D009645 5.0e-32 141.7 121 55.4
CiPaw.05G221000 Carya illinoinensis HOM05D007582 ORTHO05D009645 6.5e-32 141.4 121 54.5
Aa31LG6G9350 Aethionema arabicum HOM05D007582 ORTHO05D009645 8.5e-32 141.0 120 55.0
Haze_00435 Corylus avellana HOM05D007582 ORTHO05D009645 1.1e-31 140.6 121 55.4
BcaB07g33949 Brassica carinata HOM05D007582 ORTHO05D009645 1.9e-31 139.8 119 52.1
MELO3C010615.2 Cucumis melo HOM05D007582 ORTHO05D009645 1.9e-31 139.8 119 54.6
Migut.N03282 Erythranthe guttata HOM05D007582 ORTHO05D009645 1.9e-31 139.8 119 54.6
Lj1g0018777 Lotus japonicus HOM05D007582 ORTHO05D009645 1.9e-31 139.8 121 55.4
Thecc.08G126100 Theobroma cacao HOM05D007582 ORTHO05D009645 1.9e-31 139.8 119 52.9
FAN15G1067 Fragaria x ananassa HOM05D007582 ORTHO05D009645 2.5e-31 139.4 121 56.2
AL1G52300 Arabidopsis lyrata HOM05D007582 ORTHO05D009645 4.2e-31 138.7 120 53.3
ClCG08G005690 Citrullus lanatus HOM05D007582 ORTHO05D009645 4.2e-31 138.7 120 55.0
Aqoxy6G00227 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 5.5e-31 138.3 115 57.4
SalBow6G5334 Salvia bowleyana HOM05D007582 ORTHO05D009645 5.5e-31 138.3 119 53.8
Lj4P628T29 Lonicera japonica HOM05D007582 ORTHO05D009645 7.2e-31 137.9 129 52.7
MD15G1347500 Malus domestica HOM05D007582 ORTHO05D009645 7.2e-31 137.9 119 52.9
CANSAT11G2348 Cannabis sativa HOM05D007582 ORTHO05D009645 9.4e-31 137.5 122 52.5
PGR042G2864 Punica granatum HOM05D007582 ORTHO05D009645 9.4e-31 137.5 121 52.1
Carub.0001s3518 Capsella rubella HOM05D007582 ORTHO05D009645 1.2e-30 137.1 119 52.9
Thhalv10012348m.g Eutrema salsugineum HOM05D007582 ORTHO05D009645 1.2e-30 137.1 120 52.5
Sc22g0004000 Simmondsia chinensis HOM05D007582 ORTHO05D009645 1.2e-30 137.1 121 52.1
CDE06G0523 Ceratophyllum demersum HOM05D007582 ORTHO05D009645 1.6e-30 136.7 128 48.4
Prupe.1G495300 Prunus persica HOM05D007582 ORTHO05D009645 1.6e-30 136.7 121 52.1
Atru.chr13.1488 Acer truncatum HOM05D007582 ORTHO05D009645 2.1e-30 136.3 119 51.3
AT1G44414 Arabidopsis thaliana HOM05D007582 ORTHO05D009645 2.1e-30 136.3 120 52.5
Cc10_g11990 Coffea canephora HOM05D007582 ORTHO05D009645 2.7e-30 136.0 119 52.1
Medtr1g029990 Medicago truncatula HOM05D007582 ORTHO05D009645 3.6e-30 135.6 121 54.5
SGA_v2.0_scaffold28G11996 Striga asiatica HOM05D007582 ORTHO05D009645 3.6e-30 135.6 120 53.3
CARHR035920 Cardamine hirsuta HOM05D007582 ORTHO05D009645 4.7e-30 135.2 120 51.7
Lalb_Chr17g0343701 Lupinus albus HOM05D007582 ORTHO05D009645 8.0e-30 134.4 121 51.2
RcHm_v2.0_Chr6g0295891 Rosa chinensis HOM05D007582 ORTHO05D009645 8.0e-30 134.4 121 53.7
Sp1g33530 Schrenkiella parvula HOM05D007582 ORTHO05D009645 8.0e-30 134.4 120 51.7
TPR.G25776 Trifolium pratense HOM05D007582 ORTHO05D009645 1.0e-29 134.0 117 54.7
Hma1.2p1_0054F.1_g031010 Hydrangea macrophylla HOM05D007582 ORTHO05D009645 1.4e-29 133.7 119 52.9
BolC6t35199H Brassica oleracea HOM05D007582 ORTHO05D009645 2.3e-29 132.9 120 51.7
Sed0002225 Sechium edule HOM05D007582 ORTHO05D009645 3.0e-29 132.5 117 49.6
A06p11790 Brassica napus HOM05D007582 ORTHO05D009645 4.0e-29 132.1 121 51.2
BcaC08g42847 Brassica carinata HOM05D007582 ORTHO05D009645 8.8e-29 131.0 120 51.7
C06p00630 Brassica napus HOM05D007582 ORTHO05D009645 8.8e-29 131.0 120 51.7
Gohir.D06G045500 Gossypium hirsutum HOM05D007582 ORTHO05D009645 2.6e-28 129.4 109 54.1
Duzib116G0545 Durio zibethinus HOM05D007582 ORTHO05D009645 3.4e-28 129.0 119 48.7
CsaV3_6G034440 Cucumis sativus L. HOM05D007582 ORTHO05D009645 7.5e-28 127.9 111 54.1
Glyma.14G150500 Glycine max HOM05D007582 ORTHO05D009645 9.8e-28 127.5 122 50.0
Gorai.010G050500 Gossypium raimondii HOM05D007582 ORTHO05D009645 1.3e-27 127.1 109 53.2
VMungo0647G1492 Vigna mungo HOM05D007582 ORTHO05D009645 1.7e-27 126.7 121 49.6
HanXRQChr15g0465231 Helianthus annuus HOM05D007582 ORTHO05D009645 6.3e-27 124.8 119 51.3
SMO143G0209 Selaginella moellendorffii HOM05D007582 ORTHO05D009645 1.4e-26 123.6 115 50.4
DCAR_016167 Daucus carota HOM05D007582 ORTHO05D009645 9.1e-26 120.9 119 46.2
Phvul.008G160900 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 1.6e-25 120.2 121 47.1
Phvul.008G167875 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 1.6e-25 120.2 121 47.1
Psat6g041680 Pisum sativum HOM05D007582 ORTHO05D009139 5.9e-25 118.2 108 52.8
Gohir.A06G045000 Gossypium hirsutum HOM05D007582 ORTHO05D009645 7.7e-25 117.9 70 70.0
Nn3g18690 Nelumbo nucifera HOM05D007582 ORTHO05D009645 2.2e-24 116.3 123 45.5
arahy.Tifrunner.gnm1.ann1.WSBZ3R Arachis hypogaea HOM05D007582 ORTHO05D009645 3.8e-24 115.5 67 70.1
Mapoly0085s0071 Marchantia polymorpha HOM05D007582 ORTHO05D009645 1.2e-22 110.5 124 42.7
ECA233G1368 Erigeron canadensis HOM05D007582 ORTHO05D009645 1.8e-21 106.7 113 46.0
Pp3c19_19360 Physcomitrium patens HOM05D007582 ORTHO05D009645 5.7e-20 101.7 120 40.8
Nitab4.5_0011334g0030 Nicotiana tabacum HOM05D007582 ORTHO05D009645 1.0e-16 90.9 89 47.2
Nn4g24512 Nelumbo nucifera HOM05D007582 ORTHO05D009645 6.8e-13 78.2 81 49.4
AagrBONN_evm.TU.Sc2ySwM_362.1959 Anthoceros agrestis HOM05D007582 ORTHO05D009645 4.9e-11 72.0 68 50.0
AagrBONN_evm.TU.Sc2ySwM_362.2461 Anthoceros agrestis HOM05D007582 ORTHO05D009645 4.9e-11 72.0 65 47.7
Nn1g08790 Nelumbo nucifera HOM05D007582 ORTHO05D009645 2.7e-09 66.2 33 78.8
Aa31LG6G9370 Aethionema arabicum HOM05D007582 ORTHO05D009645 1.0e-08 64.3 119 32.8
Phvul.L001669 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 6.2e-06 55.1 42 54.8


User provided reference genes

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