Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_006635 Vanilla planifolia HOM05D038059 ORTHO05D001282 1.6e-79 299.3 146 100.0
HPP92_015346 Vanilla planifolia HOM05D038059 ORTHO05D001282 3.9e-17 92.0 155 40.0
HPP92_015502 Vanilla planifolia HOM05D001463 ORTHO05D001282 4.4e-16 88.6 160 41.2
HPP92_026967 Vanilla planifolia HOM05D038059 ORTHO05D001282 5.7e-16 88.2 155 39.4
HPP92_018161 Vanilla planifolia HOM05D001463 ORTHO05D001282 7.0e-14 81.3 159 40.3
HPP92_018174 Vanilla planifolia HOM05D001463 ORTHO05D001282 9.1e-14 80.9 159 40.3
Eucgr.J00967 Eucalyptus grandis HOM05D001463 ORTHO05D001282 1.2e-08 63.9 157 33.8
Potri.010G196400 Populus trichocarpa HOM05D001463 ORTHO05D001282 1.2e-08 63.9 134 35.1
Cpa.g.sc19.255 Carica papaya HOM05D001463 ORTHO05D001282 2.0e-08 63.2 62 50.0
Haze_17151 Corylus avellana HOM05D001463 ORTHO05D001282 2.6e-08 62.8 149 37.6
Lalb_Chr10g0104861 Lupinus albus HOM05D001463 ORTHO05D001282 2.6e-08 62.8 60 50.0
Potri.008G061700 Populus trichocarpa HOM05D001463 ORTHO05D001282 2.6e-08 62.8 132 34.1
GSVIVG01016436001 Vitis vinifera HOM05D001463 ORTHO05D001282 2.6e-08 62.8 135 36.3
COL.COLO4_25564 Corchorus olitorius HOM05D001463 ORTHO05D001282 4.4e-08 62.0 93 40.9
Gohir.A05G302600 Gossypium hirsutum HOM05D001463 ORTHO05D001282 4.4e-08 62.0 58 50.0
Atru.chr12.267 Acer truncatum HOM05D001463 ORTHO05D001282 5.7e-08 61.6 64 45.3
CiPaw.01G293300 Carya illinoinensis HOM05D001463 ORTHO05D001282 5.7e-08 61.6 154 35.7
Glyma.14G064100 Glycine max HOM05D001463 ORTHO05D001282 7.5e-08 61.2 112 36.6
LjContig00141g0025360 Lotus japonicus HOM05D001463 ORTHO05D001282 9.7e-08 60.8 59 47.5
QL08p062024 Quercus lobata HOM05D001463 ORTHO05D001282 9.7e-08 60.8 147 32.0
CARHR211340 Cardamine hirsuta HOM05D001463 ORTHO05D001282 1.3e-07 60.5 137 32.1
Cc02_g07230 Coffea canephora HOM05D001463 ORTHO05D001282 1.3e-07 60.5 148 33.8
HanXRQChr07g0202041 Helianthus annuus HOM05D001463 ORTHO05D001282 2.2e-07 59.7 66 42.4
CSS0007705 Camellia sinensis var. sinensis HOM05D001463 ORTHO05D001282 2.8e-07 59.3 60 55.0
CANSAT35G0720 Cannabis sativa HOM05D001463 ORTHO05D001282 2.8e-07 59.3 140 32.1
Lsat_1_v5_gn_2_117121 Lactuca sativa HOM05D001463 ORTHO05D001282 2.8e-07 59.3 151 33.1
BcaNung04459 Brassica carinata HOM05D001463 ORTHO05D001282 3.7e-07 58.9 54 48.1
BcaNung05702 Brassica carinata HOM05D001463 ORTHO05D001282 3.7e-07 58.9 54 48.1
MELO3C026564.2 Cucumis melo HOM05D001463 ORTHO05D001282 4.8e-07 58.5 60 48.3
LjContig00141g0012501 Lotus japonicus HOM05D001463 ORTHO05D001282 4.8e-07 58.5 59 45.8
Ca_05913_v3 Cicer arietinum L. HOM05D001463 ORTHO05D001282 6.3e-07 58.2 145 31.0
Dinv16275 Davidia involucrata HOM05D001463 ORTHO05D001282 6.3e-07 58.2 60 55.0
ECA238G2806 Erigeron canadensis HOM05D001463 ORTHO05D001282 6.3e-07 58.2 129 36.4
Manes.07G122500 Manihot esculenta HOM05D001463 ORTHO05D001282 6.3e-07 58.2 152 32.2
TAR623G0111 Trochodendron aralioides HOM05D001463 ORTHO05D001282 6.3e-07 58.2 158 32.3
CsaV3_5G008550 Cucumis sativus L. HOM05D001463 ORTHO05D001282 8.2e-07 57.8 60 48.3
Thhalv10014930m.g Eutrema salsugineum HOM05D001463 ORTHO05D001282 8.2e-07 57.8 69 40.6
AL6G11220 Arabidopsis lyrata HOM05D001463 ORTHO05D001282 1.1e-06 57.4 54 46.3
THA.LOC104816242 Tarenaya hassleriana HOM05D001463 ORTHO05D001282 1.4e-06 57.0 78 37.2
Glyma.02G252500 Glycine max HOM05D001463 ORTHO05D001282 1.8e-06 56.6 147 32.0
Medtr4g019710 Medicago truncatula HOM05D001463 ORTHO05D001282 1.8e-06 56.6 56 46.4
Nitab4.5_0006222g0010 Nicotiana tabacum HOM05D001463 ORTHO05D001282 1.8e-06 56.6 57 45.6
PGR044G2554 Punica granatum HOM05D001463 ORTHO05D001282 1.8e-06 56.6 127 34.6
MD04G1139000 Malus domestica HOM05D001463 ORTHO05D001282 2.4e-06 56.2 63 42.9
Nn2g11290 Nelumbo nucifera HOM05D001463 ORTHO05D001282 2.4e-06 56.2 61 45.9
Hund16038 Selenicereus undatus HOM05D001463 ORTHO05D001282 2.4e-06 56.2 78 37.2
Prupe.6G264600 Prunus persica HOM05D001463 ORTHO05D001282 3.1e-06 55.8 110 36.4
Hund04907 Selenicereus undatus HOM05D001463 ORTHO05D001282 3.1e-06 55.8 57 45.6
CiPaw.09G201400 Carya illinoinensis HOM05D001463 ORTHO05D001282 4.1e-06 55.5 139 33.1
Medtr5g012280 Medicago truncatula HOM05D001463 ORTHO05D001282 4.1e-06 55.5 58 44.8
Nitab4.5_0002822g0010 Nicotiana tabacum HOM05D001463 ORTHO05D001282 4.1e-06 55.5 54 53.7
Psat2g037000 Pisum sativum HOM05D001463 ORTHO05D001282 4.1e-06 55.5 60 45.0
Sabra08G0045300 Salix brachista HOM05D001463 ORTHO05D001282 4.1e-06 55.5 129 31.0
THA.LOC104810063 Tarenaya hassleriana HOM05D001463 ORTHO05D001282 4.1e-06 55.5 54 42.6
BcaNung07238 Brassica carinata HOM05D001463 ORTHO05D001282 5.3e-06 55.1 56 44.6
DCAR_027565 Daucus carota HOM05D001463 ORTHO05D001282 5.3e-06 55.1 57 50.9
PGR102G2576 Punica granatum HOM05D001463 ORTHO05D001282 5.3e-06 55.1 73 42.5
Gohir.D09G156600 Gossypium hirsutum HOM05D001463 ORTHO05D001282 7.0e-06 54.7 56 46.4
Medtr5g081360 Medicago truncatula HOM05D001463 ORTHO05D001282 7.0e-06 54.7 131 33.6
THA.LOC104827030 Tarenaya hassleriana HOM05D001463 ORTHO05D001282 7.0e-06 54.7 57 47.4
Glyma.01G105600 Glycine max HOM05D001463 ORTHO05D001282 9.1e-06 54.3 60 45.0
Lj1A144T52 Lonicera japonica HOM05D001463 ORTHO05D001282 9.1e-06 54.3 62 45.2
Lalb_Chr01g0022791 Lupinus albus HOM05D001463 ORTHO05D001282 9.1e-06 54.3 57 47.4
Lalb_Chr19g0125021 Lupinus albus HOM05D001463 ORTHO05D001282 9.1e-06 54.3 57 47.4
PGSC0003DMG400002161 Solanum tuberosum HOM05D001463 ORTHO05D001282 9.1e-06 54.3 78 39.7
TPR.G25823 Trifolium pratense HOM05D001463 ORTHO05D001282 9.1e-06 54.3 60 43.3


User provided reference genes

Program Settings