Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_006631 Vanilla planifolia HOM05D007615 ORTHO05D009643 1.6e-194 682.6 350 100.0
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 1.2e-35 154.8 137 56.9
TAR636G2052 Trochodendron aralioides HOM05D007615 ORTHO05D009643 4.5e-35 152.9 136 58.8
TAR636G3510 Trochodendron aralioides HOM05D007615 ORTHO05D009643 4.5e-35 152.9 136 58.8
ECA238G0429 Erigeron canadensis HOM05D007615 ORTHO05D009643 9.4e-33 145.2 140 51.4
Sabra10G0147900 Salix brachista HOM05D007615 ORTHO05D009643 9.4e-33 145.2 137 54.0
Ciclev10032806m.g Citrus clementina HOM05D007615 ORTHO05D009643 1.6e-32 144.4 187 44.9
Lsat_1_v5_gn_2_121681 Lactuca sativa HOM05D000277 ORTHO05D000214 2.1e-32 144.1 167 47.3
Potri.010G192300 Populus trichocarpa HOM05D007615 ORTHO05D009643 3.6e-32 143.3 134 53.7
QL08p062684 Quercus lobata HOM05D007615 ORTHO05D009643 3.6e-32 143.3 156 49.4
Nn2g11402 Nelumbo nucifera HOM05D007615 ORTHO05D009643 8.0e-32 142.1 136 52.9
Manes.07G125900 Manihot esculenta HOM05D007615 ORTHO05D009643 1.0e-31 141.7 137 49.6
Nitab4.5_0001654g0050 Nicotiana tabacum HOM05D007615 ORTHO05D009643 1.8e-31 141.0 136 55.1
Duzib170G1068 Durio zibethinus HOM05D007615 ORTHO05D009643 3.0e-31 140.2 136 52.2
Nitab4.5_0000737g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 4.0e-31 139.8 135 54.8
TWI53G1973 Tripterygium wilfordii HOM05D007615 ORTHO05D009643 4.0e-31 139.8 137 53.3
Aqoxy4G02652 Aquilegia oxysepala HOM05D007615 ORTHO05D009643 5.2e-31 139.4 140 53.6
Dinv20960 Davidia involucrata HOM05D000277 ORTHO05D000214 5.2e-31 139.4 160 47.5
Dinv20983 Davidia involucrata HOM05D000277 ORTHO05D000214 5.2e-31 139.4 160 47.5
Cpa.g.sc19.199 Carica papaya HOM05D007615 ORTHO05D009643 6.8e-31 139.0 139 54.0
CiPaw.01G296100 Carya illinoinensis HOM05D007615 ORTHO05D009643 6.8e-31 139.0 137 51.8
CSS0034825 Camellia sinensis var. sinensis HOM05D007615 ORTHO05D009643 1.5e-30 137.9 133 52.6
Cfa001360 Carpinus fangiana HOM05D007615 ORTHO05D009643 1.3e-29 134.8 129 51.9
Gohir.A08G018800 Gossypium hirsutum HOM05D007615 ORTHO05D009643 2.2e-29 134.0 138 49.3
CANSAT56G1044 Cannabis sativa HOM05D007615 ORTHO05D009643 2.8e-29 133.7 138 47.8
Haze_17188 Corylus avellana HOM05D007615 ORTHO05D009643 2.8e-29 133.7 152 46.1
Gorai.004G026800 Gossypium raimondii HOM05D007615 ORTHO05D009643 2.8e-29 133.7 138 49.3
PSO384G4204 Papaver somniferum HOM05D007615 ORTHO05D009643 2.8e-29 133.7 140 50.7
Gohir.D08G029400 Gossypium hirsutum HOM05D007615 ORTHO05D009643 3.7e-29 133.3 138 49.3
HanXRQChr07g0202461 Helianthus annuus HOM05D007615 ORTHO05D009643 3.7e-29 133.3 134 52.2
PSO339G1281 Papaver somniferum HOM05D007615 ORTHO05D009643 3.7e-29 133.3 140 51.4
Atru.chr12.235 Acer truncatum HOM05D007615 ORTHO05D009643 8.3e-29 132.1 130 50.8
RcHm_v2.0_Chr1g0369501 Rosa chinensis HOM05D007615 ORTHO05D009643 8.3e-29 132.1 149 46.3
COL.COLO4_24429 Corchorus olitorius HOM05D007615 ORTHO05D009643 1.1e-28 131.7 136 47.8
Eucgr.K02662 Eucalyptus grandis HOM05D007615 ORTHO05D009643 3.1e-28 130.2 136 47.8
Phvul.008G225800 Phaseolus vulgaris HOM05D007615 ORTHO05D009643 3.1e-28 130.2 143 47.6
Prupe.2G246900 Prunus persica HOM05D007615 ORTHO05D009643 4.1e-28 129.8 137 50.4
CDE10G1314 Ceratophyllum demersum HOM05D007615 ORTHO05D009643 7.0e-28 129.0 130 51.5
Sed0010184 Sechium edule HOM05D007615 ORTHO05D009643 7.0e-28 129.0 134 50.7
Thecc.09G179400 Theobroma cacao HOM05D007615 ORTHO05D009643 7.0e-28 129.0 161 46.6
Oeu063511.1 Olea europaea HOM05D007615 ORTHO05D009643 2.0e-27 127.5 136 50.0
Sopen04g004760 Solanum pennellii HOM05D007615 ORTHO05D009643 5.9e-27 125.9 136 49.3
EL10Ac2g04791 Beta vulgaris HOM05D007615 ORTHO05D009643 7.7e-27 125.6 136 44.9
CsaV3_6G001660 Cucumis sativus L. HOM05D007615 ORTHO05D009643 7.7e-27 125.6 155 46.5
DCAR_012632 Daucus carota HOM05D007615 ORTHO05D009643 1.0e-26 125.2 142 47.2
Rhsim09G0172300 Rhododendron simsii HOM05D007615 ORTHO05D009643 1.0e-26 125.2 137 49.6
VMungo0647G1713 Vigna mungo HOM05D007615 ORTHO05D009643 1.0e-26 125.2 143 46.2
FAN01G2468 Fragaria x ananassa HOM05D007615 ORTHO05D009643 1.7e-26 124.4 144 44.4
MD07G1214900 Malus domestica HOM05D007615 ORTHO05D009643 1.7e-26 124.4 160 41.9
Glyma.14G061700 Glycine max HOM05D007615 ORTHO05D009643 2.9e-26 123.6 140 48.6
vmacro10061 Vaccinium macrocarpon HOM05D007615 ORTHO05D009643 2.9e-26 123.6 143 45.5
LjContig00357g0021515 Lotus japonicus HOM05D007615 ORTHO05D009643 3.8e-26 123.2 140 47.1
MELO3C008283.2 Cucumis melo HOM05D007615 ORTHO05D009643 5.0e-26 122.9 152 46.1
FAN10G2819 Fragaria x ananassa HOM05D007615 ORTHO05D009643 5.0e-26 122.9 144 44.4
Cc02_g06860 Coffea canephora HOM05D007615 ORTHO05D009643 6.5e-26 122.5 158 46.8
Hund13833 Selenicereus undatus HOM05D007615 ORTHO05D009643 8.5e-26 122.1 136 44.9
PGSC0003DMG400016017 Solanum tuberosum HOM05D007615 ORTHO05D009643 8.5e-26 122.1 135 48.9
Actinidia00935 Actinidia chinensis HOM05D007615 ORTHO05D009643 1.1e-25 121.7 134 50.0
FAN06G4073 Fragaria x ananassa HOM05D007615 ORTHO05D009643 1.5e-25 121.3 138 44.2
Ah.16g103150 Amaranthus hybridus HOM05D007615 ORTHO05D009643 1.9e-25 120.9 140 43.6
FAN03G2533 Fragaria x ananassa HOM05D007615 ORTHO05D009643 3.2e-25 120.2 144 45.1
Sc11g0007250 Simmondsia chinensis HOM05D007615 ORTHO05D009643 3.2e-25 120.2 136 45.6
Lalb_Chr17g0346631 Lupinus albus HOM05D007615 ORTHO05D009643 7.2e-25 119.0 134 45.5
Ca_05936_v3 Cicer arietinum L. HOM05D007615 ORTHO05D009643 9.4e-25 118.6 154 42.9
Medtr5g081970 Medicago truncatula HOM05D007615 ORTHO05D009643 1.6e-24 117.9 158 41.1
PGR142G0690 Punica granatum HOM05D007615 ORTHO05D009643 2.1e-24 117.5 137 44.5
SEGI_38309 Sequoiadendron giganteum HOM05D007615 ORTHO05D009643 3.6e-24 116.7 148 43.9
Psat2g035440 Pisum sativum HOM05D007615 ORTHO05D009643 4.7e-24 116.3 130 50.0
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 6.1e-24 115.9 135 45.9
ClCG11G006310 Citrullus lanatus HOM05D007615 ORTHO05D009643 6.1e-24 115.9 139 46.0
Peaxi162Scf00079g00249 Petunia axillaris HOM05D007615 ORTHO05D009643 6.1e-24 115.9 116 52.6
Psat3g208000 Pisum sativum HOM05D007615 ORTHO05D009643 1.4e-23 114.8 130 48.5
TPR.G19858 Trifolium pratense HOM05D007615 ORTHO05D009643 4.4e-22 109.8 146 43.2
SGA_v2.0_scaffold456G51922 Striga asiatica HOM05D002401 ORTHO05D007109 4.8e-21 106.3 131 44.3
Aa31LG10G10810 Aethionema arabicum HOM05D007615 ORTHO05D009643 3.1e-20 103.6 137 43.1
RcHm_v2.0_Chr3g0468601 Rosa chinensis HOM05D007615 ORTHO05D009643 4.1e-20 103.2 149 42.3
CARHR165930 Cardamine hirsuta HOM05D007615 ORTHO05D009643 5.4e-20 102.8 139 43.9
SalBow6G0125 Salvia bowleyana HOM05D007615 ORTHO05D009643 1.6e-19 101.3 131 42.7
unitig_62.g23933 Utricularia gibba HOM05D007615 ORTHO05D009643 2.0e-19 100.9 138 39.1
Migut.F01421 Erythranthe guttata HOM05D007615 ORTHO05D009643 1.0e-18 98.6 149 36.9
Thhalv10010736m.g Eutrema salsugineum HOM05D007615 ORTHO05D009643 1.7e-18 97.8 143 39.9
Carub.0005s2260 Capsella rubella HOM05D007615 ORTHO05D009643 3.8e-18 96.7 140 42.1
AL5G37110 Arabidopsis lyrata HOM05D007615 ORTHO05D009643 1.1e-17 95.1 146 38.4
THA.LOC104810077 Tarenaya hassleriana HOM05D007615 ORTHO05D009643 1.1e-17 95.1 142 38.7
AT3G55820 Arabidopsis thaliana HOM05D007615 ORTHO05D009643 1.5e-17 94.7 147 38.8
Sp5g06670 Schrenkiella parvula HOM05D007615 ORTHO05D009643 1.5e-17 94.7 146 39.0
C08p31140 Brassica napus HOM05D007615 ORTHO05D009643 1.2e-16 91.7 147 36.1
BolC8t50735H Brassica oleracea HOM05D007615 ORTHO05D009643 1.2e-16 91.7 147 36.1
A09p48810 Brassica napus HOM05D007615 ORTHO05D009643 4.7e-16 89.7 134 38.1
BraA09t40334Z Brassica rapa HOM05D007615 ORTHO05D009643 4.7e-16 89.7 134 38.1
SGA_v2.0_scaffold304G47925 Striga asiatica HOM05D002401 ORTHO05D007109 1.4e-15 88.2 122 41.0
Dinv34419 Davidia involucrata HOM05D007615 ORTHO05D009643 4.0e-15 86.7 140 38.6
Nitab4.5_0002613g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 7.5e-14 82.4 78 55.1
Mapoly0011s0100 Marchantia polymorpha HOM05D007615 ORTHO05D009643 9.8e-14 82.0 167 31.1
Potri.008G065101 Populus trichocarpa HOM05D007615 ORTHO05D009643 3.7e-13 80.1 89 47.2
BcaB01g00059 Brassica carinata HOM05D007615 ORTHO05D009643 6.3e-13 79.3 143 35.7
Pp3c3_19950 Physcomitrium patens HOM05D007615 ORTHO05D009643 3.5e-11 73.6 147 29.9
Oeu046579.1 Olea europaea HOM05D007615 ORTHO05D009643 3.9e-10 70.1 120 38.3
SMO139G0141 Selaginella moellendorffii HOM05D007615 ORTHO05D009643 1.9e-09 67.8 148 32.4
SMO145G0032 Selaginella moellendorffii HOM05D001529 ORTHO05D007595 2.5e-09 67.4 141 32.6
AagrBONN_evm.TU.Sc2ySwM_368.2678 Anthoceros agrestis HOM05D007615 ORTHO05D009643 4.3e-09 66.6 191 25.7


User provided reference genes

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