Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_006593 Vanilla planifolia HOM05D006681 ORTHO05D008338 1.9e-178 629.0 309 100.0
MBI14_g35939_MAGBIO Magnolia biondii HOM05D006681 ORTHO05D008338 2.5e-114 416.0 290 66.2
Nn2g10531 Nelumbo nucifera HOM05D006681 ORTHO05D008338 7.3e-114 414.5 285 66.7
TAR633G1649 Trochodendron aralioides HOM05D006681 ORTHO05D008338 3.1e-112 409.1 292 65.8
Os05g0117500 Oryza sativa ssp. japonica HOM05D006681 ORTHO05D008338 1.2e-111 407.1 292 64.7
Aqoxy4G03072 Aquilegia oxysepala HOM05D006681 ORTHO05D008338 3.2e-109 399.1 288 63.2
Zm00001eb266060 Zea mays HOM05D006681 ORTHO05D008338 3.2e-109 399.1 293 63.8
PSO339G5789 Papaver somniferum HOM05D006681 ORTHO05D008338 2.7e-108 396.0 282 65.2
GSVIVG01025054001 Vitis vinifera HOM05D006681 ORTHO05D008338 6.0e-108 394.8 284 64.8
Lj3g0002575 Lotus japonicus HOM05D006681 ORTHO05D008338 1.0e-107 394.0 293 64.2
Ca_19209_v3 Cicer arietinum L. HOM05D006681 ORTHO05D008338 2.3e-107 392.9 289 65.1
Sopen11g030630 Solanum pennellii HOM05D006681 ORTHO05D008338 3.0e-107 392.5 293 63.8
PSO384G0101 Papaver somniferum HOM05D006681 ORTHO05D008338 1.5e-106 390.2 282 64.2
Solyc11g072970.2 Solanum lycopersicum HOM05D006681 ORTHO05D008338 1.5e-106 390.2 293 63.5
TPR.G3006 Trifolium pratense HOM05D006681 ORTHO05D008338 1.9e-106 389.8 283 65.4
Cfa011429 Carpinus fangiana HOM05D006681 ORTHO05D008338 3.3e-106 389.0 284 64.1
Atru.chr3.3798 Acer truncatum HOM05D006681 ORTHO05D008338 4.3e-106 388.7 286 61.9
Thecc.09G329700 Theobroma cacao HOM05D006681 ORTHO05D008338 7.4e-106 387.9 286 62.6
CSS0025304 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 1.3e-105 387.1 281 63.7
arahy.Tifrunner.gnm1.ann1.SK7GFS Arachis hypogaea HOM05D006681 ORTHO05D008338 1.6e-105 386.7 287 63.4
Medtr4g062130 Medicago truncatula HOM05D006681 ORTHO05D008338 2.1e-105 386.3 294 63.6
Ciclev10028948m.g Citrus clementina HOM05D006681 ORTHO05D008338 2.8e-105 386.0 286 62.6
CSS0007914 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 3.7e-105 385.6 281 63.3
CANSAT54G2145 Cannabis sativa HOM05D006681 ORTHO05D008338 3.7e-105 385.6 297 59.9
COL.COLO4_18427 Corchorus olitorius HOM05D006681 ORTHO05D008338 3.7e-105 385.6 285 62.5
HanXRQChr05g0134071 Helianthus annuus HOM05D006681 ORTHO05D008338 3.7e-105 385.6 282 65.2
CAN.G1647.1 Capsicum annuum HOM05D006681 ORTHO05D008338 4.8e-105 385.2 291 62.9
Sed0010670 Sechium edule HOM05D006681 ORTHO05D008338 8.1e-105 384.4 298 60.1
Psat7g220640 Pisum sativum HOM05D006681 ORTHO05D008338 1.1e-104 384.0 285 64.2
Potri.009G026700 Populus trichocarpa HOM05D006681 ORTHO05D008338 1.4e-104 383.6 286 62.2
MD11G1116600 Malus domestica HOM05D006681 ORTHO05D008338 1.8e-104 383.3 284 63.0
arahy.Tifrunner.gnm1.ann1.FZI6FG Arachis hypogaea HOM05D006681 ORTHO05D008338 2.4e-104 382.9 287 62.7
Cc01_g12140 Coffea canephora HOM05D006681 ORTHO05D008338 2.4e-104 382.9 286 61.9
Lalb_Chr03g0026931 Lupinus albus HOM05D006681 ORTHO05D008338 2.4e-104 382.9 292 61.6
RcHm_v2.0_Chr5g0062361 Rosa chinensis HOM05D006681 ORTHO05D008338 2.4e-104 382.9 292 63.0
Gorai.009G102400 Gossypium raimondii HOM05D006681 ORTHO05D008338 3.1e-104 382.5 286 62.6
DCAR_006014 Daucus carota HOM05D006681 ORTHO05D008338 4.0e-104 382.1 293 61.8
PGSC0003DMG400015551 Solanum tuberosum HOM05D006681 ORTHO05D008338 4.0e-104 382.1 289 63.0
ECA236G1321 Erigeron canadensis HOM05D006681 ORTHO05D008338 5.3e-104 381.7 286 64.3
Duzib170G0311 Durio zibethinus HOM05D006681 ORTHO05D008338 6.9e-104 381.3 285 60.7
Eucgr.J02098 Eucalyptus grandis HOM05D006681 ORTHO05D008338 9.0e-104 380.9 290 61.4
Gohir.A05G098700 Gossypium hirsutum HOM05D006681 ORTHO05D008338 9.0e-104 380.9 286 62.6
Gohir.D05G098750 Gossypium hirsutum HOM05D006681 ORTHO05D008338 1.2e-103 380.6 286 62.2
THA.LOC104814870 Tarenaya hassleriana HOM05D006681 ORTHO05D008338 1.2e-103 380.6 281 61.6
FAN11G3596 Fragaria x ananassa HOM05D006681 ORTHO05D008338 1.5e-103 380.2 292 62.0
Phvul.011G069100 Phaseolus vulgaris HOM05D006681 ORTHO05D008338 1.5e-103 380.2 290 63.1
FvH4_3g34680 Fragaria vesca HOM05D006681 ORTHO05D008338 2.0e-103 379.8 292 62.0
Sabra09G0017800 Salix brachista HOM05D006681 ORTHO05D008338 2.0e-103 379.8 286 61.2
QL01p034239 Quercus lobata HOM05D006681 ORTHO05D008338 2.6e-103 379.4 290 61.7
Thhalv10002615m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 5.8e-103 378.3 282 61.7
FAN16G0358 Fragaria x ananassa HOM05D006681 ORTHO05D008338 1.3e-102 377.1 290 61.7
PGR119G1802 Punica granatum HOM05D006681 ORTHO05D008338 2.9e-102 375.9 310 59.7
EL10Ac7g15941 Beta vulgaris HOM05D006681 ORTHO05D008338 4.9e-102 375.2 285 63.2
Lsat_1_v5_gn_8_78740 Lactuca sativa HOM05D006681 ORTHO05D008338 4.9e-102 375.2 282 62.4
CiPaw.13G101600 Carya illinoinensis HOM05D006681 ORTHO05D008338 8.4e-102 374.4 294 61.2
Peaxi162Scf00411g00068 Petunia axillaris HOM05D006681 ORTHO05D008338 2.5e-101 372.9 295 61.4
VMungo1127G1059 Vigna mungo HOM05D006681 ORTHO05D008338 2.5e-101 372.9 309 59.9
Prupe.6G086900 Prunus persica HOM05D006681 ORTHO05D008338 3.2e-101 372.5 287 61.7
AT3G46200 Arabidopsis thaliana HOM05D006681 ORTHO05D008338 9.3e-101 370.9 285 59.3
Carub.0005s1203 Capsella rubella HOM05D006681 ORTHO05D008338 1.6e-100 370.2 284 59.5
Oeu040277.1 Olea europaea HOM05D006681 ORTHO05D008338 2.7e-100 369.4 286 61.9
Migut.D02146 Erythranthe guttata HOM05D006681 ORTHO05D008338 6.0e-100 368.2 282 61.3
SalBow3G4078 Salvia bowleyana HOM05D006681 ORTHO05D008338 6.0e-100 368.2 293 59.4
TWI31G0387 Tripterygium wilfordii HOM05D006681 ORTHO05D008338 6.0e-100 368.2 284 60.6
AL5G24960 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 7.9e-100 367.9 285 58.6
FAN21G0481 Fragaria x ananassa HOM05D006681 ORTHO05D008338 2.3e-99 366.3 317 56.8
MSTRG.18607 Avicennia marina HOM05D006681 ORTHO05D008338 5.1e-99 365.2 290 59.3
CsaV3_6G022080 Cucumis sativus L. HOM05D006681 ORTHO05D008338 8.7e-99 364.4 286 59.1
AUR62001852 Chenopodium quinoa HOM05D006681 ORTHO05D008338 1.1e-98 364.0 286 61.2
BraA06t25188Z Brassica rapa HOM05D006681 ORTHO05D008338 2.1e-97 359.8 284 59.9
BcaC01g01926 Brassica carinata HOM05D006681 ORTHO05D008338 4.8e-97 358.6 284 58.8
C03p70520 Brassica napus HOM05D006681 ORTHO05D008338 6.2e-97 358.2 284 58.8
BolC3t19336H Brassica oleracea HOM05D006681 ORTHO05D008338 6.2e-97 358.2 284 58.8
Sp5g15430 Schrenkiella parvula HOM05D006681 ORTHO05D008338 8.2e-97 357.8 295 58.3
A06p21000 Brassica napus HOM05D006681 ORTHO05D008338 1.1e-96 357.5 284 59.5
Carub.0003s2829 Capsella rubella HOM05D006681 ORTHO05D008338 1.4e-96 357.1 284 58.5
Rhsim13G0088300 Rhododendron simsii HOM05D006681 ORTHO05D008338 5.3e-96 355.1 287 59.2
ClCG02G020630 Citrullus lanatus HOM05D006681 ORTHO05D008338 6.9e-96 354.8 343 51.9
Nitab4.5_0002684g0160 Nicotiana tabacum HOM05D006681 ORTHO05D008338 9.0e-96 354.4 300 59.7
Glyma.12G075000 Glycine max HOM05D006681 ORTHO05D008338 1.5e-95 353.6 292 59.9
Manes.11G136100 Manihot esculenta HOM05D006681 ORTHO05D008338 1.3e-91 340.5 285 58.9
SGA_v2.0_scaffold134G34764 Striga asiatica HOM05D006681 ORTHO05D008338 1.8e-91 340.1 256 63.7
Aa31LG4G15300 Aethionema arabicum HOM05D006681 ORTHO05D008338 2.3e-91 339.7 358 48.0
FAN25G3219 Fragaria x ananassa HOM05D006681 ORTHO05D008338 7.4e-90 334.7 292 57.5
Thhalv10002633m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 5.9e-87 325.1 282 54.6
Pp3c11_23040 Physcomitrium patens HOM05D006681 ORTHO05D008338 2.2e-86 323.2 283 55.5
Lj1A175T11 Lonicera japonica HOM05D006681 ORTHO05D008338 2.9e-86 322.8 286 54.9
SMO367G0798 Selaginella moellendorffii HOM05D006681 ORTHO05D008338 4.2e-85 318.9 286 55.6
Lj3g0011020 Lotus japonicus HOM05D006681 ORTHO05D008338 7.9e-84 314.7 239 62.8
Ah.08g214980 Amaranthus hybridus HOM05D006681 ORTHO05D008338 1.0e-83 314.3 285 55.1
Mapoly0128s0008 Marchantia polymorpha HOM05D006681 ORTHO05D008338 2.3e-83 313.2 281 55.2
AUR62009646 Chenopodium quinoa HOM05D006681 ORTHO05D008338 5.1e-83 312.0 287 53.3
vmacro03125 Vaccinium macrocarpon HOM05D006681 ORTHO05D008338 1.1e-82 310.8 286 54.5
AagrBONN_evm.TU.Sc2ySwM_228.1772 Anthoceros agrestis HOM05D006681 ORTHO05D008338 3.1e-80 302.8 281 53.0
Nitab4.5_0002684g0190 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.5e-79 300.4 264 58.7
Dinv32860 Davidia involucrata HOM05D006681 ORTHO05D008338 3.8e-78 295.8 219 64.4
Nitab4.5_0001953g0020 Nicotiana tabacum HOM05D006681 ORTHO05D008338 4.2e-77 292.4 251 55.8
Duzib168G1095 Durio zibethinus HOM05D006681 ORTHO05D008338 3.9e-75 285.8 285 49.1
Cpa.g.sc2126.1 Carica papaya HOM05D006681 ORTHO05D008338 2.6e-74 283.1 210 63.8
MELO3C013668.2 Cucumis melo HOM05D006681 ORTHO05D008338 1.3e-73 280.8 267 52.4
Haze_24007 Corylus avellana HOM05D006681 ORTHO05D008338 2.0e-71 273.5 448 37.9
CBR_g415 Chara braunii HOM05D006681 ORTHO05D008338 2.9e-70 269.6 361 40.4
Sc06g0008190 Simmondsia chinensis HOM05D006681 ORTHO05D008338 1.3e-62 244.2 178 61.8
Nitab4.5_0001953g0050 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.9e-61 240.4 289 45.7
Hund05017 Selenicereus undatus HOM05D006681 ORTHO05D008338 1.2e-60 237.7 286 44.8
ATR0759G055 Amborella trichopoda HOM05D006681 ORTHO05D008338 8.3e-57 224.9 169 60.9
AL1G56400 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 4.1e-56 222.6 186 58.1
Pp3c11_23047 Physcomitrium patens HOM05D006681 ORTHO05D008338 9.1e-56 221.5 177 60.5
SEGI_27570 Sequoiadendron giganteum HOM05D006681 ORTHO05D008338 3.5e-55 219.5 202 52.5
Nitab4.5_0000766g0030 Nicotiana tabacum HOM05D006681 ORTHO05D008338 6.8e-35 152.1 142 52.1
Sc06g0008200 Simmondsia chinensis HOM05D006681 ORTHO05D008338 1.0e-30 138.3 107 59.8
PRCOL_00001211 Prasinoderma coloniale HOM05D006681 ORTHO05D008338 1.5e-29 134.4 441 24.9
Glyma.11G145018 Glycine max HOM05D006681 ORTHO05D008338 9.5e-29 131.7 126 51.6
CAN.G1289.2 Capsicum annuum HOM05D006681 ORTHO05D008338 5.8e-26 122.5 206 36.9
MCO11G760 Micromonas commoda HOM05D006681 ORTHO05D008338 1.2e-23 114.8 261 27.6
MD03G1102800 Malus domestica HOM05D006681 ORTHO05D008338 1.8e-19 100.9 72 63.9
CDE08G1356 Ceratophyllum demersum HOM05D006681 ORTHO05D008338 1.1e-16 91.7 69 55.1
Actinidia20468 Actinidia chinensis HOM05D006681 ORTHO05D008338 1.6e-12 77.8 73 52.1
Nitab4.5_0001068g0110 Nicotiana tabacum HOM05D006681 ORTHO05D008338 2.8e-12 77.0 48 72.9
CARHR154620 Cardamine hirsuta HOM05D006681 ORTHO05D008338 4.6e-07 59.7 47 57.4


User provided reference genes

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