Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_006569 Vanilla planifolia HOM05D002660 ORTHO05D003902 3.0e-20 100.9 52 100.0
HPP92_006535 Vanilla planifolia HOM05D002660 ORTHO05D003902 1.7e-10 68.6 51 72.5
Sed0024408 Sechium edule HOM05D002660 ORTHO05D003902 3.5e-08 60.8 51 52.9
Nn1g10113 Nelumbo nucifera HOM05D002660 ORTHO05D003902 1.3e-07 58.9 45 62.2
TAR371G0124 Trochodendron aralioides HOM05D002660 ORTHO05D003902 1.3e-07 58.9 45 62.2
SGA_v2.0_scaffold420G51340 Striga asiatica HOM05D002660 ORTHO05D003902 2.2e-07 58.2 50 54.0
Nn1g10106 Nelumbo nucifera HOM05D002660 ORTHO05D003902 2.9e-07 57.8 50 52.0
Nn1g10197 Nelumbo nucifera HOM05D002660 ORTHO05D003902 2.9e-07 57.8 50 52.0
arahy.Tifrunner.gnm1.ann1.BS65NI Arachis hypogaea HOM05D002660 ORTHO05D003902 3.8e-07 57.4 50 48.0
arahy.Tifrunner.gnm1.ann1.ET7F5Q Arachis hypogaea HOM05D002660 ORTHO05D003902 3.8e-07 57.4 50 48.0
arahy.Tifrunner.gnm1.ann1.P7KX5B Arachis hypogaea HOM05D002660 ORTHO05D003902 3.8e-07 57.4 50 48.0
arahy.Tifrunner.gnm1.ann1.QMNG84 Arachis hypogaea HOM05D002660 ORTHO05D003902 3.8e-07 57.4 50 48.0
Nitab4.5_0012260g0040 Nicotiana tabacum HOM05D002660 ORTHO05D003902 5.0e-07 57.0 45 62.2
arahy.Tifrunner.gnm1.ann1.8U7R2G Arachis hypogaea HOM05D002660 ORTHO05D003902 6.5e-07 56.6 50 48.0
CAN.G950.7 Capsicum annuum HOM05D002660 ORTHO05D003902 6.5e-07 56.6 52 53.8
MBI04_g15067_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 6.5e-07 56.6 49 55.1
MBI04_g40993_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 6.5e-07 56.6 49 55.1
Sopen11g012750 Solanum pennellii HOM05D002660 ORTHO05D003902 6.5e-07 56.6 45 62.2
Lsat_1_v5_gn_5_13340 Lactuca sativa HOM05D002660 ORTHO05D003902 1.1e-06 55.8 49 51.0
Lsat_1_v5_gn_5_172580 Lactuca sativa HOM05D002660 ORTHO05D003902 1.1e-06 55.8 49 51.0
CSS0017389 Camellia sinensis var. sinensis HOM05D002660 ORTHO05D003902 1.9e-06 55.1 45 57.8
MBI14_g38259_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D010725 2.5e-06 54.7 51 51.0
arahy.Tifrunner.gnm1.ann1.HMG3T6 Arachis hypogaea HOM05D002660 ORTHO05D003902 3.2e-06 54.3 50 44.0
CAN.G1.6 Capsicum annuum HOM05D002660 ORTHO05D003902 3.2e-06 54.3 53 50.9
Lsat_1_v5_gn_8_124640 Lactuca sativa HOM05D002660 ORTHO05D003902 3.2e-06 54.3 48 50.0
Lsat_1_v5_gn_8_93860 Lactuca sativa HOM05D002660 ORTHO05D003902 3.2e-06 54.3 48 50.0
ATR0502G001 Amborella trichopoda HOM05D002660 ORTHO05D003902 4.2e-06 53.9 49 53.1
Nitab4.5_0000031g0200 Nicotiana tabacum HOM05D002660 ORTHO05D003902 4.2e-06 53.9 45 57.8
Dinv06680 Davidia involucrata HOM05D002660 ORTHO05D011644 5.5e-06 53.5 45 55.6
CAN.G1167.16 Capsicum annuum HOM05D002660 ORTHO05D003902 9.5e-06 52.8 53 50.9
Medtr0212s0050 Medicago truncatula HOM05D002660 ORTHO05D003902 9.5e-06 52.8 49 49.0
Psat4g178320 Pisum sativum HOM05D002660 ORTHO05D003902 9.5e-06 52.8 49 49.0


User provided reference genes

Program Settings