Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_006544 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.4e-150 533.9 276 100.0
HPP92_011125 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.5e-70 268.9 220 71.8
HPP92_028576 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.2e-69 266.5 218 70.6
HPP92_027994 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.0e-67 258.5 266 60.2
HPP92_027649 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.7e-66 255.0 239 64.9
HPP92_006873 Vanilla planifolia HOM05D000450 ORTHO05D002608 1.5e-54 217.2 228 59.2
HPP92_027653 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.4e-47 193.4 165 69.1
HPP92_027088 Vanilla planifolia HOM05D003551 ORTHO05D004869 8.8e-42 174.9 209 55.0
HPP92_028511 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.3e-41 172.6 150 68.0
HPP92_026938 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.6e-38 163.3 147 63.9
HPP92_028492 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.3e-37 161.0 186 57.0
HPP92_006855 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.5e-36 156.8 200 53.0
HPP92_028371 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.4e-31 141.0 116 69.0
HPP92_027078 Vanilla planifolia HOM05D003551 ORTHO05D004869 5.9e-30 135.6 189 50.8
HPP92_006576 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.5e-29 132.1 125 64.8
HPP92_026597 Vanilla planifolia HOM05D003551 ORTHO05D430828 2.5e-28 130.2 114 66.7
HPP92_006539 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.6e-27 127.5 117 60.7
HPP92_006499 Vanilla planifolia HOM05D003551 ORTHO05D431715 1.4e-26 124.4 89 75.3
HPP92_027648 Vanilla planifolia HOM05D003551 ORTHO05D430192 1.8e-26 124.0 71 84.5
HPP92_006538 Vanilla planifolia HOM05D003551 ORTHO05D004869 5.2e-26 122.5 163 52.8
HPP92_027084 Vanilla planifolia HOM05D003551 ORTHO05D430072 1.7e-24 117.5 112 62.5
HPP92_027083 Vanilla planifolia HOM05D003551 ORTHO05D004869 8.5e-21 105.1 72 75.0
HPP92_006552 Vanilla planifolia HOM05D003551 ORTHO05D431459 4.7e-19 99.4 95 62.1
Cpa.g.sc33.80 Carica papaya HOM05D003551 ORTHO05D004869 2.7e-14 83.6 234 32.9
Hma1.2p1_0079F.1_g041260 Hydrangea macrophylla HOM05D003551 ORTHO05D004869 2.7e-14 83.6 117 43.6
CSS0025446 Camellia sinensis var. sinensis HOM05D003551 ORTHO05D004869 2.2e-13 80.5 174 36.2
HPP92_026933 Vanilla planifolia HOM05D015067 ORTHO05D427257 6.5e-13 79.0 71 66.2
Nn4g22519 Nelumbo nucifera HOM05D003551 ORTHO05D004869 2.5e-12 77.0 120 45.0
HPP92_028550 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.5e-12 77.0 76 60.5
Zm00001eb279220 Zea mays HOM05D003551 ORTHO05D004869 4.2e-12 76.3 109 42.2
Ciclev10030726m.g Citrus clementina HOM05D003551 ORTHO05D004869 5.5e-12 75.9 195 35.4
Os04g0630000 Oryza sativa ssp. japonica HOM05D003551 ORTHO05D004869 5.5e-12 75.9 153 37.9
C08p46730 Brassica napus HOM05D003551 ORTHO05D004869 7.2e-12 75.5 104 45.2
Zm00001eb069620 Zea mays HOM05D003551 ORTHO05D004869 7.2e-12 75.5 220 32.7
THA.LOC104809236 Tarenaya hassleriana HOM05D003551 ORTHO05D004869 9.4e-12 75.1 159 37.7
Gohir.A12G268000 Gossypium hirsutum HOM05D003551 ORTHO05D004869 1.2e-11 74.7 113 42.5
Duzib268G0822 Durio zibethinus HOM05D003551 ORTHO05D004869 2.1e-11 73.9 110 43.6
Dinv14754 Davidia involucrata HOM05D003551 ORTHO05D004869 2.7e-11 73.6 232 32.8
Haze_12293 Corylus avellana HOM05D003551 ORTHO05D004869 6.1e-11 72.4 117 41.9
HPP92_026598 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.1e-11 72.4 40 85.0
QL05p021165 Quercus lobata HOM05D003551 ORTHO05D004869 1.0e-10 71.6 145 39.3
Atru.chr11.1973 Acer truncatum HOM05D003551 ORTHO05D004869 1.4e-10 71.2 216 33.3
Gorai.008G288600 Gossypium raimondii HOM05D003551 ORTHO05D004869 1.8e-10 70.9 158 37.3
Aa31LG1G1640 Aethionema arabicum HOM05D003551 ORTHO05D004869 2.3e-10 70.5 247 30.0
Cfa009260 Carpinus fangiana HOM05D003551 ORTHO05D004869 2.3e-10 70.5 149 36.9
FAN17G0358 Fragaria x ananassa HOM05D003551 ORTHO05D004869 2.3e-10 70.5 119 35.3
FvH4_4g25230 Fragaria vesca HOM05D003551 ORTHO05D004869 4.0e-10 69.7 115 35.7
FAN12G2593 Fragaria x ananassa HOM05D003551 ORTHO05D004869 4.0e-10 69.7 115 35.7
Oeu014152.4 Olea europaea HOM05D003551 ORTHO05D004869 4.0e-10 69.7 210 31.9
Sc04g0005970 Simmondsia chinensis HOM05D003551 ORTHO05D004869 4.0e-10 69.7 170 34.1
Sc04g0005980 Simmondsia chinensis HOM05D003551 ORTHO05D004869 4.0e-10 69.7 170 34.1
Eucgr.H02450 Eucalyptus grandis HOM05D003551 ORTHO05D004869 5.2e-10 69.3 167 34.1
unitig_22.g6420 Utricularia gibba HOM05D003551 ORTHO05D004869 5.2e-10 69.3 152 38.8
FAN22G1040 Fragaria x ananassa HOM05D003551 ORTHO05D004869 6.8e-10 68.9 115 35.7
CiPaw.06G064600 Carya illinoinensis HOM05D003551 ORTHO05D004869 8.8e-10 68.6 154 37.0
Gohir.D12G268400 Gossypium hirsutum HOM05D003551 ORTHO05D004869 8.8e-10 68.6 170 34.1
Manes.12G019500 Manihot esculenta HOM05D003551 ORTHO05D004869 1.2e-09 68.2 148 34.5
Sp1g11680 Schrenkiella parvula HOM05D003551 ORTHO05D004869 1.5e-09 67.8 159 35.2
AL7G20520 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 2.0e-09 67.4 205 32.2
Oeu028968.1 Olea europaea HOM05D003551 ORTHO05D004869 2.6e-09 67.0 239 32.2
TAR374G0642 Trochodendron aralioides HOM05D003551 ORTHO05D004869 2.6e-09 67.0 156 34.6
A09p63240 Brassica napus HOM05D003551 ORTHO05D004869 3.4e-09 66.6 97 43.3
BraA09t41676Z Brassica rapa HOM05D003551 ORTHO05D004869 3.4e-09 66.6 97 43.3
RcHm_v2.0_Chr4g0432421 Rosa chinensis HOM05D003551 ORTHO05D004869 3.4e-09 66.6 115 34.8
Sabra08G0139300 Salix brachista HOM05D003551 ORTHO05D004869 3.4e-09 66.6 166 35.5
Actinidia01371 Actinidia chinensis HOM05D002413 ORTHO05D002638 4.4e-09 66.2 223 29.6
AL1G24840 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 4.4e-09 66.2 102 42.2
COL.COLO4_23531 Corchorus olitorius HOM05D003551 ORTHO05D004869 4.4e-09 66.2 174 34.5
Thhalv10006828m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 4.4e-09 66.2 129 38.8
DCAR_007035 Daucus carota HOM05D003551 ORTHO05D004869 5.7e-09 65.9 187 33.7
MD16G1105900 Malus domestica HOM05D003551 ORTHO05D004869 5.7e-09 65.9 162 32.1
MSTRG.7955 Avicennia marina HOM05D003551 ORTHO05D004869 7.5e-09 65.5 154 35.7
Phvul.001G256500 Phaseolus vulgaris HOM05D003551 ORTHO05D004869 7.5e-09 65.5 124 37.1
CARHR013530 Cardamine hirsuta HOM05D003551 ORTHO05D004869 1.3e-08 64.7 96 42.7
Nitab4.5_0004725g0020 Nicotiana tabacum HOM05D003551 ORTHO05D004869 2.2e-08 63.9 89 47.2
Nitab4.5_0001290g0150 Nicotiana tabacum HOM05D003551 ORTHO05D004869 2.8e-08 63.5 89 47.2
Potri.008G182900 Populus trichocarpa HOM05D003551 ORTHO05D004869 3.7e-08 63.2 102 38.2
Hund25033 Selenicereus undatus HOM05D003551 ORTHO05D004869 3.7e-08 63.2 113 37.2
TWI36G0896 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 3.7e-08 63.2 169 33.7
BolC8t52212H Brassica oleracea HOM05D003551 ORTHO05D004869 4.8e-08 62.8 96 42.7
TWI75G1217 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 4.8e-08 62.8 159 36.5
GSVIVG01000585001 Vitis vinifera HOM05D003551 ORTHO05D004869 4.8e-08 62.8 159 33.3
AT1G13160 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 6.3e-08 62.4 96 42.7
Sed0023493 Sechium edule HOM05D003551 ORTHO05D004869 6.3e-08 62.4 244 28.7
VMungo0540G0742 Vigna mungo HOM05D003551 ORTHO05D004869 6.3e-08 62.4 110 38.2
Carub.0003s0103 Capsella rubella HOM05D003551 ORTHO05D004869 1.1e-07 61.6 128 38.3
Thhalv10005577m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 1.1e-07 61.6 151 35.8
Rhsim12G0038300 Rhododendron simsii HOM05D003551 ORTHO05D004869 1.1e-07 61.6 163 32.5
CDE02G2789 Ceratophyllum demersum HOM05D003551 ORTHO05D004869 1.8e-07 60.8 118 35.6
Carub.0001s1289 Capsella rubella HOM05D003551 ORTHO05D004869 2.4e-07 60.5 129 37.2
CANSAT01G3182 Cannabis sativa HOM05D003551 ORTHO05D004869 3.1e-07 60.1 141 35.5
Medtr3g086350 Medicago truncatula HOM05D003551 ORTHO05D004869 3.1e-07 60.1 104 37.5
CAN.G484.3 Capsicum annuum HOM05D003551 ORTHO05D004869 7.0e-07 58.9 89 43.8
Lsat_1_v5_gn_8_153700 Lactuca sativa HOM05D003551 ORTHO05D004869 7.0e-07 58.9 136 34.6
Lalb_Chr23g0277731 Lupinus albus HOM05D003551 ORTHO05D004869 7.0e-07 58.9 241 30.7
LjContig00312_ERROPOS870357g0004032 Lotus japonicus HOM05D003551 ORTHO05D004869 9.1e-07 58.5 116 34.5
SalBow2G2049 Salvia bowleyana HOM05D003551 ORTHO05D004869 9.1e-07 58.5 219 31.5
Prupe.1G240500 Prunus persica HOM05D003551 ORTHO05D004869 1.6e-06 57.8 258 27.9
TPR.G5678 Trifolium pratense HOM05D003551 ORTHO05D004869 2.7e-06 57.0 153 32.7
vmacro01109 Vaccinium macrocarpon HOM05D003551 ORTHO05D004869 2.7e-06 57.0 205 32.2
MELO3C022674.2 Cucumis melo HOM05D003551 ORTHO05D004869 3.5e-06 56.6 188 31.4
CsaV3_1G012700 Cucumis sativus L. HOM05D003551 ORTHO05D004869 3.5e-06 56.6 185 30.8
Psat2g160640 Pisum sativum HOM05D003551 ORTHO05D004869 3.5e-06 56.6 150 34.0
AT4G31520 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 4.5e-06 56.2 232 28.9
arahy.Tifrunner.gnm1.ann1.A5BQBU Arachis hypogaea HOM05D003551 ORTHO05D004869 4.5e-06 56.2 119 32.8
MELO3C026845.2 Cucumis melo HOM05D003551 ORTHO05D004869 4.5e-06 56.2 166 30.7
Sopen12g034510 Solanum pennellii HOM05D003551 ORTHO05D004869 4.5e-06 56.2 151 33.8
PGSC0003DMG400004723 Solanum tuberosum HOM05D003551 ORTHO05D004869 4.5e-06 56.2 151 33.8
Glyma.11G244500 Glycine max HOM05D003551 ORTHO05D004869 5.9e-06 55.8 153 32.7
PSO017G3678 Papaver somniferum HOM05D003551 ORTHO05D004869 7.7e-06 55.5 153 34.0
HPP92_028011 Vanilla planifolia HOM05D003551 ORTHO05D432208 7.7e-06 55.5 47 66.0


User provided reference genes

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