Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_006533 Vanilla planifolia HOM05D003991 ORTHO05D004883 6.9e-151 537.3 285 100.0
HPP92_025879 Vanilla planifolia HOM05D003991 ORTHO05D004883 1.4e-71 273.9 379 48.5
MBI17_g07944_MAGBIO Magnolia biondii HOM05D003991 ORTHO05D004883 2.2e-48 196.8 368 37.5
HPP92_026595 Vanilla planifolia HOM05D003991 ORTHO05D004883 6.0e-46 188.7 125 80.8
Cpa.g.sc541.1 Carica papaya HOM05D003991 ORTHO05D004883 6.7e-45 185.3 408 32.1
HPP92_006579 Vanilla planifolia HOM05D003991 ORTHO05D004883 8.7e-45 184.9 244 52.5
TAR622G0714 Trochodendron aralioides HOM05D003991 ORTHO05D004883 2.5e-44 183.3 380 34.7
PSO782G2666 Papaver somniferum HOM05D003991 ORTHO05D004883 5.3e-42 175.6 361 34.9
Ciclev10011098m.g Citrus clementina HOM05D003991 ORTHO05D004883 6.9e-42 175.3 360 33.1
Potri.004G114600 Populus trichocarpa HOM05D003991 ORTHO05D004883 9.0e-42 174.9 361 33.0
Potri.017G100300 Populus trichocarpa HOM05D003991 ORTHO05D004883 1.2e-41 174.5 361 33.0
Duzib138G0045 Durio zibethinus HOM05D003991 ORTHO05D004883 2.6e-41 173.3 360 33.3
TAR374G0063 Trochodendron aralioides HOM05D003991 ORTHO05D004883 3.4e-41 172.9 380 34.2
Nn4g23516 Nelumbo nucifera HOM05D003991 ORTHO05D004883 7.7e-41 171.8 380 33.9
COL.COLO4_10252 Corchorus olitorius HOM05D003991 ORTHO05D004883 1.3e-40 171.0 360 33.6
Gorai.001G207000 Gossypium raimondii HOM05D003991 ORTHO05D004883 1.3e-40 171.0 364 33.0
PSO063G1675 Papaver somniferum HOM05D003991 ORTHO05D004883 2.2e-40 170.2 361 34.3
Medtr7g016900 Medicago truncatula HOM05D003991 ORTHO05D004883 2.9e-40 169.9 360 33.1
Lalb_Chr10g0092711 Lupinus albus HOM05D003991 ORTHO05D004883 5.0e-40 169.1 357 33.1
TPR.G23393 Trifolium pratense HOM05D003991 ORTHO05D004883 5.0e-40 169.1 360 33.3
GSVIVG01036544001 Vitis vinifera HOM05D003991 ORTHO05D004883 5.0e-40 169.1 358 33.0
EL10Ac2g04440 Beta vulgaris HOM05D003991 ORTHO05D004883 1.4e-39 167.5 360 33.3
CANSAT64G1645 Cannabis sativa HOM05D003991 ORTHO05D004883 1.9e-39 167.2 361 33.0
Hund13674 Selenicereus undatus HOM05D003991 ORTHO05D004883 1.9e-39 167.2 360 32.2
Ca_06908_v3 Cicer arietinum L. HOM05D003991 ORTHO05D004883 3.2e-39 166.4 360 33.9
Eucgr.I02064 Eucalyptus grandis HOM05D003991 ORTHO05D004883 4.2e-39 166.0 361 32.7
VMungo1383G3466 Vigna mungo HOM05D003991 ORTHO05D004883 4.2e-39 166.0 360 32.8
TWI32G1311 Tripterygium wilfordii HOM05D003991 ORTHO05D004883 5.5e-39 165.6 365 32.3
Lj4A124G55 Lonicera japonica HOM05D003991 ORTHO05D004883 7.2e-39 165.2 360 33.3
Phvul.008G026400 Phaseolus vulgaris HOM05D003991 ORTHO05D004883 9.4e-39 164.9 360 32.5
CiPaw.03G082800 Carya illinoinensis HOM05D003991 ORTHO05D004883 1.2e-38 164.5 361 32.4
TWI34G0665 Tripterygium wilfordii HOM05D003991 ORTHO05D004883 2.1e-38 163.7 360 33.1
Duzib133G0226 Durio zibethinus HOM05D003991 ORTHO05D004883 3.6e-38 162.9 360 31.9
Glyma.08G251400 Glycine max HOM05D003991 ORTHO05D004883 1.0e-37 161.4 360 33.6
Lj1g0022443 Lotus japonicus HOM05D003991 ORTHO05D004883 1.4e-37 161.0 360 32.5
Manes.02G059600 Manihot esculenta HOM05D003991 ORTHO05D004883 1.4e-37 161.0 361 32.1
Glyma.18G274100 Glycine max HOM05D003991 ORTHO05D004883 2.3e-37 160.2 360 33.3
Manes.01G103600 Manihot esculenta HOM05D003991 ORTHO05D004883 2.3e-37 160.2 361 32.4
Nitab4.5_0000154g0150 Nicotiana tabacum HOM05D003991 ORTHO05D004883 2.3e-37 160.2 361 32.4
Aa31LG2G3750 Aethionema arabicum HOM05D003991 ORTHO05D004883 3.9e-37 159.5 360 31.4
DCAR_011017 Daucus carota HOM05D003991 ORTHO05D004883 3.9e-37 159.5 364 32.7
Nitab4.5_0001434g0090 Nicotiana tabacum HOM05D003991 ORTHO05D004883 3.9e-37 159.5 361 32.4
Atru.chr8.642 Acer truncatum HOM05D003991 ORTHO05D004883 6.7e-37 158.7 340 32.9
AL7G51550 Arabidopsis lyrata HOM05D003991 ORTHO05D004883 6.7e-37 158.7 360 31.4
CSS0001564 Camellia sinensis var. sinensis HOM05D003991 ORTHO05D004883 1.1e-36 157.9 360 31.7
AT5G38880 Arabidopsis thaliana HOM05D003991 ORTHO05D004883 1.5e-36 157.5 360 31.4
Cfa007697 Carpinus fangiana HOM05D003991 ORTHO05D004883 1.5e-36 157.5 358 33.8
AUR62023158 Chenopodium quinoa HOM05D003991 ORTHO05D004883 1.5e-36 157.5 407 31.4
C07p38530 Brassica napus HOM05D003991 ORTHO05D004883 2.5e-36 156.8 358 32.1
BolC7t44375H Brassica oleracea HOM05D003991 ORTHO05D004883 2.5e-36 156.8 358 32.1
Peaxi162Scf01002g00121 Petunia axillaris HOM05D003991 ORTHO05D004883 2.5e-36 156.8 361 31.6
Sp2g18130 Schrenkiella parvula HOM05D003991 ORTHO05D004883 2.5e-36 156.8 360 31.7
vmacro18126 Vaccinium macrocarpon HOM05D003991 ORTHO05D004883 3.3e-36 156.4 352 33.0
BcaC06g33715 Brassica carinata HOM05D003991 ORTHO05D004883 5.7e-36 155.6 358 31.8
Thhalv10003675m.g Eutrema salsugineum HOM05D003991 ORTHO05D004883 7.4e-36 155.2 360 31.4
AUR62009479 Chenopodium quinoa HOM05D003991 ORTHO05D004883 9.7e-36 154.8 360 32.2
Lsat_1_v5_gn_3_96860 Lactuca sativa HOM05D003991 ORTHO05D004883 9.7e-36 154.8 361 31.6
Sabra17G0086400 Salix brachista HOM05D003991 ORTHO05D004883 1.3e-35 154.5 337 31.8
Prupe.3G248800 Prunus persica HOM05D003991 ORTHO05D004883 2.2e-35 153.7 360 31.7
MD09G1074500 Malus domestica HOM05D003991 ORTHO05D004883 2.8e-35 153.3 360 32.2
Carub.0007s3697 Capsella rubella HOM05D003991 ORTHO05D004883 3.7e-35 152.9 360 30.8
A06p39740 Brassica napus HOM05D003991 ORTHO05D004883 6.3e-35 152.1 359 31.5
BraA06t26889Z Brassica rapa HOM05D003991 ORTHO05D004883 6.3e-35 152.1 359 31.5
FAN05G5440 Fragaria x ananassa HOM05D003991 ORTHO05D004883 6.3e-35 152.1 358 31.8
MD17G1065900 Malus domestica HOM05D003991 ORTHO05D004883 8.2e-35 151.8 360 31.9
BcaC06g30850 Brassica carinata HOM05D003991 ORTHO05D004883 1.1e-34 151.4 359 31.8
Aqoxy3G03722 Aquilegia oxysepala HOM05D003991 ORTHO05D004883 4.1e-34 149.4 380 31.8
CiPaw.04G052100 Carya illinoinensis HOM05D003991 ORTHO05D004883 4.1e-34 149.4 365 31.2
Migut.O00382 Erythranthe guttata HOM05D003991 ORTHO05D004883 4.1e-34 149.4 356 31.2
Thhalv10027646m.g Eutrema salsugineum HOM05D003991 ORTHO05D004883 4.1e-34 149.4 360 29.7
Hma1.2p1_1837F.1_g304750 Hydrangea macrophylla HOM05D003991 ORTHO05D004883 4.1e-34 149.4 361 31.6
Sopen03g010790 Solanum pennellii HOM05D003991 ORTHO05D004883 4.1e-34 149.4 361 31.6
Gohir.A07G179600 Gossypium hirsutum HOM05D003991 ORTHO05D004883 2.6e-33 146.7 331 32.0
SGA_v2.0_scaffold148G36448 Striga asiatica HOM05D003991 ORTHO05D004883 4.5e-33 146.0 362 31.5
THA.LOC104822745 Tarenaya hassleriana HOM05D003991 ORTHO05D004883 4.5e-33 146.0 343 32.9
Thecc.04G106400 Theobroma cacao HOM05D003991 ORTHO05D004883 4.5e-33 146.0 332 31.3
Psat3g203280 Pisum sativum HOM05D003991 ORTHO05D004883 5.9e-33 145.6 360 30.3
ATR0605G126 Amborella trichopoda HOM05D003991 ORTHO05D004883 1.0e-32 144.8 369 30.9
Sed0026923 Sechium edule HOM05D003991 ORTHO05D004883 1.3e-32 144.4 338 32.0
FvH4_6g46350 Fragaria vesca HOM05D003991 ORTHO05D004883 1.7e-32 144.1 348 31.3
Gohir.D07G186400 Gossypium hirsutum HOM05D003991 ORTHO05D004883 1.7e-32 144.1 331 31.4
HanXRQChr02g0043871 Helianthus annuus HOM05D003991 ORTHO05D004883 2.9e-32 143.3 352 30.7
CAN.G427.3 Capsicum annuum HOM05D003991 ORTHO05D004883 6.5e-32 142.1 361 30.2
FAN09G2010 Fragaria x ananassa HOM05D003991 ORTHO05D004883 6.5e-32 142.1 348 31.0
MELO3C026296.2 Cucumis melo HOM05D003991 ORTHO05D004883 1.1e-31 141.4 338 31.4
FAN14G3680 Fragaria x ananassa HOM05D003991 ORTHO05D004883 1.1e-31 141.4 348 31.0
RcHm_v2.0_Chr2g0164851 Rosa chinensis HOM05D003991 ORTHO05D004883 1.1e-31 141.4 348 31.0
CsaV3_4G010070 Cucumis sativus L. HOM05D003991 ORTHO05D004883 1.4e-31 141.0 338 31.4
Zm00001eb099080 Zea mays HOM05D003991 ORTHO05D004883 7.2e-31 138.7 361 30.2
arahy.Tifrunner.gnm1.ann1.YA99EJ Arachis hypogaea HOM05D003991 ORTHO05D004883 1.6e-30 137.5 335 30.4
FAN02G3988 Fragaria x ananassa HOM05D003991 ORTHO05D004883 3.6e-30 136.3 343 30.6
SEGI_18103 Sequoiadendron giganteum HOM05D003991 ORTHO05D004883 7.9e-30 135.2 352 30.4
PGR004G0075 Punica granatum HOM05D003991 ORTHO05D004883 1.4e-29 134.4 338 30.8
CDE06G2000 Ceratophyllum demersum HOM05D003991 ORTHO05D004883 3.9e-29 132.9 361 28.8
C09p04400 Brassica napus HOM05D003991 ORTHO05D004883 5.1e-29 132.5 344 30.8
Lsat_1_v5_gn_2_90201 Lactuca sativa HOM05D003991 ORTHO05D004883 1.5e-28 131.0 332 33.1
Oeu007082.1 Olea europaea HOM05D003991 ORTHO05D004883 3.3e-28 129.8 417 28.1
Solyc03g046590.3 Solanum lycopersicum HOM05D003991 ORTHO05D004883 4.4e-28 129.4 361 29.4
Cc07_g04500 Coffea canephora HOM05D003991 ORTHO05D004883 5.7e-28 129.0 360 30.6
Rhsim08G0077400 Rhododendron simsii HOM05D003991 ORTHO05D004883 7.4e-28 128.6 360 30.3
HPP92_026824 Vanilla planifolia HOM05D003991 ORTHO05D004883 7.4e-28 128.6 93 73.1
arahy.Tifrunner.gnm1.ann1.T6I3L8 Arachis hypogaea HOM05D003991 ORTHO05D004883 9.7e-28 128.3 347 29.4
BolC9t53370H Brassica oleracea HOM05D003991 ORTHO05D004883 1.3e-27 127.9 318 31.8
SalBow1G2342 Salvia bowleyana HOM05D003991 ORTHO05D004883 2.2e-27 127.1 361 30.5
Ah.16g101030 Amaranthus hybridus HOM05D003991 ORTHO05D004883 3.7e-27 126.3 360 30.0
BraA09t36055Z Brassica rapa HOM05D003991 ORTHO05D004883 3.7e-27 126.3 325 32.0
Haze_14380 Corylus avellana HOM05D003991 ORTHO05D004883 6.3e-27 125.6 430 28.1
HPP92_026934 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.4e-26 124.4 76 82.9
MBI17_g36999_MAGBIO Magnolia biondii HOM05D003991 ORTHO05D004883 1.8e-26 124.0 297 33.7
ClCG07G016050 Citrullus lanatus HOM05D003991 ORTHO05D004883 5.9e-25 119.0 378 28.0
CARHR263670 Cardamine hirsuta HOM05D003991 ORTHO05D004883 1.0e-24 118.2 131 48.1
MSTRG.2973 Avicennia marina HOM05D003991 ORTHO05D004883 1.7e-24 117.5 361 27.7
HanXRQChr07g0200011 Helianthus annuus HOM05D003991 ORTHO05D004883 1.7e-24 117.5 370 28.4
Sc11g0008820 Simmondsia chinensis HOM05D003991 ORTHO05D004883 1.7e-24 117.5 316 28.8
Os09g0386600 Oryza sativa ssp. japonica HOM05D003991 ORTHO05D004883 1.4e-23 114.4 107 57.0
Actinidia26270 Actinidia chinensis HOM05D003991 ORTHO05D004883 3.2e-23 113.2 308 29.5
CSS0050035 Camellia sinensis var. sinensis HOM05D003991 ORTHO05D004883 5.5e-23 112.5 360 27.8
ECA246G2054 Erigeron canadensis HOM05D003991 ORTHO05D004883 5.5e-23 112.5 361 29.1
Zm00001eb311840 Zea mays HOM05D003991 ORTHO05D004883 1.8e-21 107.5 130 46.2
Dinv33866 Davidia involucrata HOM05D003991 ORTHO05D004883 6.7e-21 105.5 112 54.5
ECA238G0416 Erigeron canadensis HOM05D003991 ORTHO05D004883 2.0e-20 104.0 351 27.4
BcaC04g23825 Brassica carinata HOM05D003991 ORTHO05D004883 2.2e-19 100.5 315 29.8
BcaC04g23813 Brassica carinata HOM05D003991 ORTHO05D004883 1.8e-18 97.4 310 28.7
Dinv33865 Davidia involucrata HOM05D003991 ORTHO05D004883 1.2e-17 94.7 98 50.0
A09p04180 Brassica napus HOM05D003991 ORTHO05D004883 7.7e-17 92.0 340 28.5
Pp3c9_9760 Physcomitrium patens HOM05D003991 ORTHO05D004883 1.7e-16 90.9 347 24.5
Pp3c9_9870 Physcomitrium patens HOM05D003991 ORTHO05D004883 1.7e-16 90.9 347 24.5
HPP92_027091 Vanilla planifolia HOM05D003991 ORTHO05D004883 2.2e-16 90.5 98 56.1
unitig_748.g8415 Utricularia gibba HOM05D003991 ORTHO05D004883 2.9e-16 90.1 329 25.5
Pp3c15_7610 Physcomitrium patens HOM05D003991 ORTHO05D004883 1.1e-15 88.2 348 25.9
Mapoly0016s0130 Marchantia polymorpha HOM05D003991 ORTHO05D004883 1.5e-15 87.8 390 23.8
ECA285G0010 Erigeron canadensis HOM05D003991 ORTHO05D004883 6.1e-14 82.4 236 30.1
HPP92_006571 Vanilla planifolia HOM05D001096 ORTHO05D429418 1.0e-13 81.6 61 80.3
HPP92_027976 Vanilla planifolia HOM05D003991 ORTHO05D004883 1.0e-13 81.6 112 49.1
SMO147G0301 Selaginella moellendorffii HOM05D003991 ORTHO05D004883 1.8e-13 80.9 348 23.6
BcaC04g23820 Brassica carinata HOM05D003991 ORTHO05D004883 8.8e-13 78.6 205 33.2
HPP92_028205 Vanilla planifolia HOM05D003991 ORTHO05D004883 1.2e-12 78.2 49 79.6
BcaC04g23815 Brassica carinata HOM05D003991 ORTHO05D004883 5.7e-12 75.9 187 30.5
Pp3c10_8720 Physcomitrium patens HOM05D003991 ORTHO05D004883 7.5e-12 75.5 335 24.5
HPP92_006572 Vanilla planifolia HOM05D003991 ORTHO05D004883 2.8e-11 73.6 48 85.4
HPP92_028494 Vanilla planifolia HOM05D003991 ORTHO05D004883 2.4e-10 70.5 49 79.6
SMO147G0173 Selaginella moellendorffii HOM05D003991 ORTHO05D004883 5.3e-10 69.3 98 42.9
Aa31LG1G6630 Aethionema arabicum HOM05D003991 ORTHO05D004883 3.5e-09 66.6 129 36.4
AagrBONN_evm.TU.Sc2ySwM_344.1887 Anthoceros agrestis HOM05D003991 ORTHO05D004883 2.1e-06 57.4 128 30.5
HPP92_027679 Vanilla planifolia HOM05D003991 ORTHO05D004883 3.6e-06 56.6 63 52.4
HPP92_006495 Vanilla planifolia HOM05D021141 ORTHO05D431285 8.0e-06 55.5 61 50.8


User provided reference genes

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