Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_006525 Vanilla planifolia HOM05D000920 ORTHO05D004854 1.6e-48 195.7 91 100.0
HPP92_007077 Vanilla planifolia HOM05D000920 ORTHO05D004854 1.8e-20 102.4 69 71.0
unitig_579.g34798 Utricularia gibba HOM05D001018 ORTHO05D000626 3.7e-13 78.2 69 62.3
unitig_177.g32847 Utricularia gibba HOM05D000920 ORTHO05D004854 1.4e-12 76.3 69 60.9
Zm00001eb436930 Zea mays HOM05D010106 ORTHO05D000626 4.1e-12 74.7 69 58.0
unitig_146.g30219 Utricularia gibba HOM05D000920 ORTHO05D000626 4.5e-11 71.2 60 63.3
unitig_807.g34417 Utricularia gibba HOM05D000920 ORTHO05D000626 5.0e-10 67.8 60 60.0
unitig_161.g31377 Utricularia gibba HOM05D000920 ORTHO05D000626 1.4e-09 66.2 51 64.7
Lj6g0027271 Lotus japonicus HOM05D000920 ORTHO05D004854 3.2e-09 65.1 39 76.9
LjContig00006g0000950 Lotus japonicus HOM05D000920 ORTHO05D004854 3.2e-09 65.1 39 76.9
LjContig00006g0017690 Lotus japonicus HOM05D000920 ORTHO05D004854 3.2e-09 65.1 39 76.9
LjContig00479g0009062 Lotus japonicus HOM05D000920 ORTHO05D004854 3.2e-09 65.1 39 76.9
CSS0035511 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D004854 4.2e-09 64.7 63 57.1
Thhalv10028160m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 7.2e-09 63.9 39 76.9
Thhalv10028221m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 7.2e-09 63.9 39 76.9
Thhalv10028284m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 7.2e-09 63.9 39 76.9
Nn085s42708 Nelumbo nucifera HOM05D000920 ORTHO05D012001 9.4e-09 63.5 38 78.9
Nn085s42709 Nelumbo nucifera HOM05D000920 ORTHO05D012001 9.4e-09 63.5 38 78.9
Nn3g20606 Nelumbo nucifera HOM05D000920 ORTHO05D012001 9.4e-09 63.5 38 78.9
Nn3g20607 Nelumbo nucifera HOM05D000920 ORTHO05D012001 9.4e-09 63.5 38 78.9
Nn5g31238 Nelumbo nucifera HOM05D000920 ORTHO05D012001 9.4e-09 63.5 38 78.9
Nn5g31239 Nelumbo nucifera HOM05D000920 ORTHO05D012001 9.4e-09 63.5 38 78.9
Nn5g31261 Nelumbo nucifera HOM05D000920 ORTHO05D012001 9.4e-09 63.5 38 78.9
Nn5g31262 Nelumbo nucifera HOM05D000920 ORTHO05D012001 9.4e-09 63.5 38 78.9
Nn6g32713 Nelumbo nucifera HOM05D000920 ORTHO05D012001 9.4e-09 63.5 38 78.9
Nn6g32714 Nelumbo nucifera HOM05D000920 ORTHO05D012001 9.4e-09 63.5 38 78.9
Nn6g32747 Nelumbo nucifera HOM05D000920 ORTHO05D012001 9.4e-09 63.5 38 78.9
Nn6g32748 Nelumbo nucifera HOM05D000920 ORTHO05D012001 9.4e-09 63.5 38 78.9
Nn6g32841 Nelumbo nucifera HOM05D000920 ORTHO05D012001 9.4e-09 63.5 38 78.9
Nn6g32842 Nelumbo nucifera HOM05D000920 ORTHO05D012001 9.4e-09 63.5 38 78.9
Nn6g32904 Nelumbo nucifera HOM05D000920 ORTHO05D012001 9.4e-09 63.5 38 78.9
Nn6g32905 Nelumbo nucifera HOM05D000920 ORTHO05D012001 9.4e-09 63.5 38 78.9
Nn6g32926 Nelumbo nucifera HOM05D000920 ORTHO05D012001 9.4e-09 63.5 38 78.9
Nn6g32927 Nelumbo nucifera HOM05D000920 ORTHO05D012001 9.4e-09 63.5 38 78.9
Nn6g32946 Nelumbo nucifera HOM05D000920 ORTHO05D012001 9.4e-09 63.5 38 78.9
Nn6g33096 Nelumbo nucifera HOM05D000920 ORTHO05D012001 9.4e-09 63.5 38 78.9
Nn6g33097 Nelumbo nucifera HOM05D000920 ORTHO05D012001 9.4e-09 63.5 38 78.9
Nn6g33155 Nelumbo nucifera HOM05D000920 ORTHO05D012001 9.4e-09 63.5 38 78.9
Nn6g33159 Nelumbo nucifera HOM05D000920 ORTHO05D012001 9.4e-09 63.5 38 78.9
Nn6g33160 Nelumbo nucifera HOM05D000920 ORTHO05D012001 9.4e-09 63.5 38 78.9
Nn6g33174 Nelumbo nucifera HOM05D000920 ORTHO05D012001 9.4e-09 63.5 38 78.9
Zm00001eb262430 Zea mays HOM05D001847 ORTHO05D004854 9.4e-09 63.5 60 60.0
Rhsim05G0123800 Rhododendron simsii HOM05D000920 ORTHO05D004854 1.2e-08 63.2 52 59.6
CSS0041785 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D024711 3.6e-08 61.6 63 55.6
unitig_161.g31392 Utricularia gibba HOM05D001018 ORTHO05D000626 4.7e-08 61.2 65 55.4
unitig_724.g29527 Utricularia gibba HOM05D000920 ORTHO05D004854 4.7e-08 61.2 51 62.7
CSS0039809 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D004854 6.1e-08 60.8 63 55.6
unitig_668.g29654 Utricularia gibba HOM05D000920 ORTHO05D004854 6.1e-08 60.8 51 62.7
unitig_676.g29554 Utricularia gibba HOM05D000920 ORTHO05D004854 6.1e-08 60.8 76 50.0
Zm00001eb264000 Zea mays HOM05D000920 ORTHO05D004854 7.9e-08 60.5 39 74.4
Zm00001eb264050 Zea mays HOM05D000920 ORTHO05D004854 2.0e-06 55.8 39 69.2
CSS0007537 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D024711 4.4e-06 54.7 63 54.0
ECA240G4657 Erigeron canadensis HOM05D000920 ORTHO05D004854 4.4e-06 54.7 33 75.8
CSS0002196 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D014920 5.7e-06 54.3 66 48.5
Sopen07g009440 Solanum pennellii HOM05D000920 ORTHO05D004854 5.7e-06 54.3 40 65.0
CSS0033051 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D014920 7.4e-06 53.9 63 52.4
CBR_g30868 Chara braunii HOM05D000003 ORTHO05D000004 7.4e-06 53.9 89 44.9


User provided reference genes

Program Settings