Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_006332 Vanilla planifolia HOM05D005525 ORTHO05D006341 6.1e-220 767.3 419 100.0
HPP92_027874 Vanilla planifolia HOM05D005525 ORTHO05D006341 1.7e-177 626.3 376 94.7
Sopen03g022860 Solanum pennellii HOM05D005525 ORTHO05D006341 1.8e-62 244.2 392 43.6
TAR636G1140 Trochodendron aralioides HOM05D005525 ORTHO05D006341 1.8e-62 244.2 413 43.1
Solyc03g083060.3 Solanum lycopersicum HOM05D005525 ORTHO05D006341 4.0e-62 243.0 392 43.4
Peaxi162Scf00740g10015 Petunia axillaris HOM05D005525 ORTHO05D006341 8.9e-62 241.9 392 43.1
PGSC0003DMG400018550 Solanum tuberosum HOM05D005525 ORTHO05D006341 1.2e-61 241.5 392 45.2
ClCG05G008980 Citrullus lanatus HOM05D005525 ORTHO05D006341 2.8e-60 236.9 386 45.3
Nitab4.5_0007888g0020 Nicotiana tabacum HOM05D005525 ORTHO05D006341 8.3e-60 235.3 368 42.7
Phvul.009G051800 Phaseolus vulgaris HOM05D005525 ORTHO05D006341 8.3e-60 235.3 371 44.2
CsaV3_3G019800 Cucumis sativus L. HOM05D005525 ORTHO05D006341 4.1e-59 233.0 394 43.7
GSVIVG01038560001 Vitis vinifera HOM05D005525 ORTHO05D006341 7.0e-59 232.3 386 44.8
MBI07_g24776_MAGBIO Magnolia biondii HOM05D005525 ORTHO05D006341 1.6e-58 231.1 440 40.7
Nitab4.5_0007005g0020 Nicotiana tabacum HOM05D005525 ORTHO05D006341 2.0e-58 230.7 350 44.0
CAN.G481.19 Capsicum annuum HOM05D005525 ORTHO05D006341 3.5e-58 229.9 397 43.1
Gohir.A03G052000 Gossypium hirsutum HOM05D005525 ORTHO05D006341 3.5e-58 229.9 368 43.8
MELO3C008500.2 Cucumis melo HOM05D005525 ORTHO05D006341 4.5e-58 229.6 394 43.7
CiPaw.05G197600 Carya illinoinensis HOM05D005525 ORTHO05D006341 1.3e-57 228.0 393 42.7
Eucgr.A01450 Eucalyptus grandis HOM05D005525 ORTHO05D006341 1.3e-57 228.0 392 43.4
Actinidia06143 Actinidia chinensis HOM05D005525 ORTHO05D006341 2.3e-57 227.3 378 43.9
TAR375G0567 Trochodendron aralioides HOM05D005525 ORTHO05D006341 6.6e-57 225.7 417 41.7
Actinidia03175 Actinidia chinensis HOM05D005525 ORTHO05D006341 8.6e-57 225.3 379 44.6
Ciclev10018919m.g Citrus clementina HOM05D005525 ORTHO05D006341 8.6e-57 225.3 390 42.8
Glyma.06G129650 Glycine max HOM05D005525 ORTHO05D006341 8.6e-57 225.3 376 44.4
Prupe.2G309100 Prunus persica HOM05D005525 ORTHO05D006341 8.6e-57 225.3 386 43.0
Atru.chr12.2235 Acer truncatum HOM05D005525 ORTHO05D006341 1.1e-56 224.9 361 44.0
MD07G1287000 Malus domestica HOM05D005525 ORTHO05D006341 1.9e-56 224.2 386 42.0
Rhsim09G0206200 Rhododendron simsii HOM05D005525 ORTHO05D006341 3.3e-56 223.4 388 43.3
CSS0016451 Camellia sinensis var. sinensis HOM05D005525 ORTHO05D006341 1.6e-55 221.1 391 41.7
Sed0006937 Sechium edule HOM05D005525 ORTHO05D006341 2.1e-55 220.7 392 42.6
Duzib068G0374 Durio zibethinus HOM05D005525 ORTHO05D006341 3.6e-55 219.9 388 43.0
vmacro10127 Vaccinium macrocarpon HOM05D005525 ORTHO05D006341 6.1e-55 219.2 423 41.1
arahy.Tifrunner.gnm1.ann1.SHH15X Arachis hypogaea HOM05D005525 ORTHO05D006341 1.0e-54 218.4 379 42.2
Hma1.2p1_0404F.1_g145280 Hydrangea macrophylla HOM05D005525 ORTHO05D006341 1.4e-54 218.0 380 42.6
FAN06G2949 Fragaria x ananassa HOM05D005525 ORTHO05D006341 1.8e-54 217.6 374 42.0
arahy.Tifrunner.gnm1.ann1.9S9EKZ Arachis hypogaea HOM05D005525 ORTHO05D006341 2.3e-54 217.2 379 42.0
Gohir.D03G115100 Gossypium hirsutum HOM05D005525 ORTHO05D006341 3.0e-54 216.9 371 42.6
FAN06G1464 Fragaria x ananassa HOM05D005525 ORTHO05D006341 5.2e-54 216.1 374 42.0
Duzib205G1243 Durio zibethinus HOM05D005525 ORTHO05D006341 6.8e-54 215.7 387 43.2
Haze_00203 Corylus avellana HOM05D005525 ORTHO05D006341 8.9e-54 215.3 400 42.5
Hma1.2p1_1587F.1_g292280 Hydrangea macrophylla HOM05D005525 ORTHO05D006341 1.2e-53 214.9 365 43.3
HanXRQChr04g0100481 Helianthus annuus HOM05D005525 ORTHO05D006341 2.6e-53 213.8 353 42.5
Lj1A1021T46 Lonicera japonica HOM05D005525 ORTHO05D006341 3.4e-53 213.4 349 43.3
Lj1C1018G9 Lonicera japonica HOM05D005525 ORTHO05D006341 3.4e-53 213.4 349 43.3
DCAR_010595 Daucus carota HOM05D005525 ORTHO05D006341 4.4e-53 213.0 388 39.9
Gorai.003G121400 Gossypium raimondii HOM05D005525 ORTHO05D006341 7.5e-53 212.2 371 41.8
Glyma.04G234800 Glycine max HOM05D005525 ORTHO05D006341 9.8e-53 211.8 374 42.0
Lj3A903T39 Lonicera japonica HOM05D005525 ORTHO05D006341 2.2e-52 210.7 384 42.4
Thecc.03G200300 Theobroma cacao HOM05D005525 ORTHO05D006341 2.2e-52 210.7 388 41.2
Sabra12G0015700 Salix brachista HOM05D005525 ORTHO05D006341 3.7e-52 209.9 424 39.4
MSTRG.27021 Avicennia marina HOM05D005525 ORTHO05D006341 4.9e-52 209.5 372 41.7
FvH4_7g31370 Fragaria vesca HOM05D005525 ORTHO05D006341 8.3e-52 208.8 374 40.6
FAN01G0744 Fragaria x ananassa HOM05D005525 ORTHO05D006341 1.1e-51 208.4 374 40.1
CANSAT21G1899 Cannabis sativa HOM05D005525 ORTHO05D006341 1.4e-51 208.0 380 42.4
Cfa016238 Carpinus fangiana HOM05D005525 ORTHO05D006341 4.1e-51 206.5 399 40.9
QL09p008682 Quercus lobata HOM05D005525 ORTHO05D006341 7.0e-51 205.7 398 41.7
FAN03G1856 Fragaria x ananassa HOM05D005525 ORTHO05D006341 9.2e-51 205.3 374 40.4
ATR0602G130 Amborella trichopoda HOM05D005525 ORTHO05D006341 1.2e-50 204.9 453 38.4
Potri.012G016600 Populus trichocarpa HOM05D005525 ORTHO05D006341 1.2e-50 204.9 429 39.6
Medtr3g091650 Medicago truncatula HOM05D005525 ORTHO05D006341 1.6e-50 204.5 375 39.7
Cpa.g.sc3.96 Carica papaya HOM05D005525 ORTHO05D006341 2.0e-50 204.1 382 41.1
TWI39G0464 Tripterygium wilfordii HOM05D005525 ORTHO05D006341 2.0e-50 204.1 386 40.7
CSS0028512 Camellia sinensis var. sinensis HOM05D005525 ORTHO05D006341 2.7e-50 203.8 390 42.1
MSTRG.8648 Avicennia marina HOM05D005525 ORTHO05D006341 6.0e-50 202.6 393 39.9
Dinv29269 Davidia involucrata HOM05D005525 ORTHO05D006341 7.8e-50 202.2 343 43.7
TAR425G0002 Trochodendron aralioides HOM05D005525 ORTHO05D006341 7.8e-50 202.2 416 38.9
Nn3g18957 Nelumbo nucifera HOM05D005525 ORTHO05D006341 2.3e-49 200.7 405 40.5
TPR.G18747 Trifolium pratense HOM05D005525 ORTHO05D006341 3.0e-49 200.3 379 39.3
Gohir.D12G250100 Gossypium hirsutum HOM05D005525 ORTHO05D006341 3.9e-49 199.9 393 40.7
Gorai.008G268200 Gossypium raimondii HOM05D005525 ORTHO05D006341 3.9e-49 199.9 391 41.4
COL.COLO4_16772 Corchorus olitorius HOM05D005525 ORTHO05D006341 4.3e-48 196.4 356 42.7
Psat5g076600 Pisum sativum HOM05D005525 ORTHO05D006341 4.3e-48 196.4 375 40.8
VMungo1309G0981 Vigna mungo HOM05D005525 ORTHO05D005321 1.6e-47 194.5 373 39.9
Hund11649 Selenicereus undatus HOM05D005525 ORTHO05D006341 3.6e-47 193.4 390 38.2
Ca_16715_v3 Cicer arietinum L. HOM05D005525 ORTHO05D006341 1.4e-46 191.4 379 39.6
RcHm_v2.0_Chr1g0380441 Rosa chinensis HOM05D005525 ORTHO05D006341 1.8e-46 191.0 373 38.9
Oeu041060.1 Olea europaea HOM05D005525 ORTHO05D006341 3.1e-46 190.3 393 38.2
Cc02_g01440 Coffea canephora HOM05D005525 ORTHO05D006341 6.8e-46 189.1 393 39.4
PGR042G3532 Punica granatum HOM05D005525 ORTHO05D006341 8.9e-46 188.7 386 40.2
Aqoxy5G03920 Aquilegia oxysepala HOM05D005525 ORTHO05D006341 2.0e-45 187.6 446 37.9
Lsat_1_v5_gn_2_136220 Lactuca sativa HOM05D005525 ORTHO05D006341 5.8e-45 186.0 359 39.6
CDE10G1205 Ceratophyllum demersum HOM05D005525 ORTHO05D006341 2.9e-44 183.7 380 36.8
Manes.02G143500 Manihot esculenta HOM05D005525 ORTHO05D006341 6.4e-44 182.6 426 36.6
Lalb_Chr08g0240181 Lupinus albus HOM05D005525 ORTHO05D006341 8.3e-44 182.2 375 37.9
Potri.015G012000 Populus trichocarpa HOM05D005525 ORTHO05D006341 4.1e-43 179.9 388 39.2
Manes.01G184300 Manihot esculenta HOM05D005525 ORTHO05D006341 5.4e-43 179.5 422 37.0
PSO063G1159 Papaver somniferum HOM05D005525 ORTHO05D006341 9.2e-43 178.7 431 37.1
PSO170G3224 Papaver somniferum HOM05D005525 ORTHO05D006341 4.6e-42 176.4 419 37.7
Lj2g0006014 Lotus japonicus HOM05D005525 ORTHO05D006341 7.8e-42 175.6 373 37.8
Sabra15G0009700 Salix brachista HOM05D005525 ORTHO05D006341 5.0e-41 172.9 396 38.1
AUR62006078 Chenopodium quinoa HOM05D005525 ORTHO05D006341 1.1e-40 171.8 417 35.7
THA.LOC104799969 Tarenaya hassleriana HOM05D005525 ORTHO05D006341 3.3e-40 170.2 366 37.4
Gohir.A12G249300 Gossypium hirsutum HOM05D005525 ORTHO05D006341 3.6e-39 166.8 249 45.4
Hund21011 Selenicereus undatus HOM05D005525 ORTHO05D006341 1.1e-38 165.2 375 35.7
AUR62019416 Chenopodium quinoa HOM05D005525 ORTHO05D006341 2.3e-38 164.1 448 34.2
EL10Ac3g05265 Beta vulgaris HOM05D005525 ORTHO05D006341 3.7e-36 156.8 385 38.7
SGA_v2.0_scaffold192G40531 Striga asiatica HOM05D005525 ORTHO05D006341 5.4e-35 152.9 356 34.0
TWI14G1294 Tripterygium wilfordii HOM05D005525 ORTHO05D006341 2.1e-34 151.0 384 36.2
Hma1.2p1_1507F.1_g287640 Hydrangea macrophylla HOM05D005525 ORTHO05D006341 3.6e-31 140.2 225 38.2
Thhalv10012800m.g Eutrema salsugineum HOM05D005525 ORTHO05D006341 5.2e-30 136.3 372 35.2
Os01g0550600 Oryza sativa ssp. japonica HOM05D005525 ORTHO05D006341 6.8e-30 136.0 382 32.7
SEGI_37005 Sequoiadendron giganteum HOM05D005525 ORTHO05D006341 5.8e-29 132.9 324 34.3
unitig_92.g28252 Utricularia gibba HOM05D005525 ORTHO05D006341 2.2e-28 131.0 375 35.5
Zm00001eb162450 Zea mays HOM05D005525 ORTHO05D006341 7.1e-27 125.9 387 30.5
Zm00001eb441470 Zea mays HOM05D005525 ORTHO05D006341 7.1e-27 125.9 387 30.5
Migut.F00203 Erythranthe guttata HOM05D005525 ORTHO05D006341 3.5e-26 123.6 347 33.7
BcaB08g35660 Brassica carinata HOM05D005525 ORTHO05D006341 4.6e-26 123.2 261 38.7
Sc13g0009970 Simmondsia chinensis HOM05D005525 ORTHO05D006341 2.3e-25 120.9 372 32.3
CARHR266030 Cardamine hirsuta HOM05D005525 ORTHO05D006341 3.0e-25 120.6 371 33.2
BraA10t43132Z Brassica rapa HOM05D005525 ORTHO05D006341 3.3e-24 117.1 261 37.2
A10p10490 Brassica napus HOM05D005525 ORTHO05D006341 4.3e-24 116.7 261 37.2
BcaC04g20517 Brassica carinata HOM05D005525 ORTHO05D006341 7.3e-24 115.9 261 36.4
AT5G53020 Arabidopsis thaliana HOM05D005525 ORTHO05D006341 9.6e-24 115.5 263 37.6
C09p42720 Brassica napus HOM05D005525 ORTHO05D006341 9.6e-24 115.5 261 36.4
BolC9t57148H Brassica oleracea HOM05D005525 ORTHO05D006341 9.6e-24 115.5 261 36.4
arahy.Tifrunner.gnm1.ann1.K3B567 Arachis hypogaea HOM05D005525 ORTHO05D006341 1.2e-23 115.2 203 42.9
AL8G27640 Arabidopsis lyrata HOM05D005525 ORTHO05D006341 5.2e-22 109.8 367 31.9
Carub.0008s1321 Capsella rubella HOM05D005525 ORTHO05D006341 6.9e-22 109.4 262 36.6
unitig_52.g17717 Utricularia gibba HOM05D005525 ORTHO05D006341 2.0e-21 107.8 258 37.2
arahy.Tifrunner.gnm1.ann1.X3UYKF Arachis hypogaea HOM05D005525 ORTHO05D006341 2.2e-20 104.4 187 42.2
QL04p080554 Quercus lobata HOM05D005525 ORTHO05D006341 4.9e-20 103.2 126 54.8
Sp6g15170 Schrenkiella parvula HOM05D005525 ORTHO05D006341 1.2e-18 98.6 277 33.9
arahy.Tifrunner.gnm1.ann1.Y3S9ZW Arachis hypogaea HOM05D005525 ORTHO05D006341 2.7e-18 97.4 257 35.0
Migut.F01024 Erythranthe guttata HOM05D005525 ORTHO05D006341 3.9e-17 93.6 291 31.3
SalBow2G0921 Salvia bowleyana HOM05D005525 ORTHO05D006341 5.1e-17 93.2 392 31.6
Pp3c14_9740 Physcomitrium patens HOM05D019088 ORTHO05D006341 2.4e-14 84.3 436 25.2
Pp3c14_1700 Physcomitrium patens HOM05D005525 ORTHO05D006341 2.2e-12 77.8 260 32.3
Pp3c10_6810 Physcomitrium patens HOM05D019088 ORTHO05D006341 1.6e-10 71.6 424 25.7
Dinv06084 Davidia involucrata HOM05D005525 ORTHO05D006341 4.6e-10 70.1 97 51.5
SEGI_17880 Sequoiadendron giganteum HOM05D005525 ORTHO05D006341 6.7e-09 66.2 357 24.9
Pp3c1_27330 Physcomitrium patens HOM05D019088 ORTHO05D006341 2.5e-08 64.3 415 25.5
SEGI_12943 Sequoiadendron giganteum HOM05D005525 ORTHO05D008121 1.8e-06 58.2 213 26.8


User provided reference genes

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