Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 1.0e-157 560.1 290 100.0
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 4.4e-153 544.7 294 96.3
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 6.9e-98 361.3 293 64.2
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 6.9e-98 361.3 293 64.2
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 9.0e-98 360.9 276 65.9
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 2.2e-96 356.3 293 61.4
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 6.5e-96 354.8 295 63.4
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 8.5e-96 354.4 288 60.1
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 1.1e-95 354.0 293 61.1
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 1.1e-95 354.0 276 63.8
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 1.4e-95 353.6 280 63.6
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 1.9e-95 353.2 279 62.4
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 4.2e-95 352.1 279 62.7
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 1.6e-94 350.1 284 62.7
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 1.0e-93 347.4 287 62.4
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 1.0e-93 347.4 278 65.5
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 1.4e-93 347.1 279 62.7
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 3.9e-93 345.5 276 64.1
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 5.1e-93 345.1 293 63.1
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 5.1e-93 345.1 283 61.1
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 5.1e-93 345.1 279 63.1
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 6.7e-93 344.7 281 63.7
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 8.8e-93 344.4 294 61.9
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 8.8e-93 344.4 293 58.7
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 8.8e-93 344.4 295 61.0
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 8.8e-93 344.4 293 61.4
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 1.5e-92 343.6 293 60.1
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 2.0e-92 343.2 281 63.3
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 2.6e-92 342.8 281 63.0
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 2.6e-92 342.8 293 60.8
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 3.3e-92 342.4 280 62.5
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 5.7e-92 341.7 289 60.2
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 5.7e-92 341.7 276 63.4
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.7e-91 340.1 292 58.6
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 1.7e-91 340.1 294 59.9
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 2.8e-91 339.3 293 60.4
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 2.8e-91 339.3 294 60.9
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 3.7e-91 339.0 294 60.5
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 3.7e-91 339.0 276 62.7
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 4.8e-91 338.6 274 61.3
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 4.8e-91 338.6 296 62.2
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 6.3e-91 338.2 278 62.9
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 8.2e-91 337.8 283 62.2
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 8.2e-91 337.8 293 60.1
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 1.1e-90 337.4 282 61.0
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 1.8e-90 336.7 276 63.0
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 2.4e-90 336.3 296 61.1
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 3.1e-90 335.9 272 62.1
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 4.1e-90 335.5 292 59.2
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 5.3e-90 335.1 296 61.8
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 1.2e-89 334.0 292 57.9
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 1.5e-89 333.6 276 62.0
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 4.5e-89 332.0 276 60.1
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 5.9e-89 331.6 278 62.6
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 7.7e-89 331.3 284 57.7
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 7.7e-89 331.3 279 59.1
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 7.7e-89 331.3 278 62.9
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 1.0e-88 330.9 296 58.4
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 1.0e-88 330.9 293 57.3
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 2.9e-88 329.3 276 60.5
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 2.9e-88 329.3 292 57.9
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 3.8e-88 328.9 286 58.4
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 5.0e-88 328.6 291 58.4
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 5.0e-88 328.6 296 57.1
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 5.0e-88 328.6 292 58.9
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 1.4e-87 327.0 294 57.8
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 1.4e-87 327.0 287 59.6
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 1.9e-87 326.6 278 62.6
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 3.2e-87 325.9 277 60.6
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 7.2e-87 324.7 286 58.0
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 7.2e-87 324.7 296 56.8
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 9.4e-87 324.3 294 58.8
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 4.7e-86 322.0 280 60.0
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 6.1e-86 321.6 292 57.9
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 1.0e-85 320.9 288 58.7
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 1.0e-85 320.9 271 59.8
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 1.0e-85 320.9 278 59.0
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 4.4e-84 315.5 275 58.5
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 7.4e-84 314.7 273 59.7
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 1.1e-82 310.8 300 57.0
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 1.1e-82 310.8 279 57.7
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 3.1e-82 309.3 277 58.5
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 3.1e-82 309.3 277 58.5
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 4.1e-82 308.9 277 58.1
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 4.1e-82 308.9 360 48.1
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 4.1e-82 308.9 274 58.8
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 7.0e-82 308.1 277 59.2
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 1.6e-81 307.0 280 58.2
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 1.6e-81 307.0 277 59.2
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 2.0e-81 306.6 277 58.1
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 4.5e-81 305.4 288 55.2
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 1.0e-80 304.3 280 56.8
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 1.3e-80 303.9 254 62.2
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 5.0e-80 302.0 280 56.1
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 5.0e-80 302.0 276 57.2
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 2.5e-79 299.7 276 56.9
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 4.2e-79 298.9 280 56.1
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 2.7e-78 296.2 276 56.5
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 6.1e-78 295.0 279 55.6
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 8.0e-78 294.7 247 61.5
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 2.2e-75 286.6 271 55.0
ECA246G0085 Erigeron canadensis HOM05D005681 ORTHO05D007274 9.1e-74 281.2 245 61.6
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 1.2e-73 280.8 441 40.1
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 1.2e-73 280.8 279 53.0
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 7.7e-73 278.1 281 54.8
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 6.1e-70 268.5 270 55.2
CsaV3_2G031020 Cucumis sativus L. HOM05D005681 ORTHO05D007274 3.7e-67 259.2 199 64.8
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 6.3e-67 258.5 261 55.6
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 1.4e-66 257.3 273 53.8
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.8e-66 256.9 204 64.2
BolC7t46377H Brassica oleracea HOM05D005681 ORTHO05D007274 1.6e-62 243.8 208 60.6
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 4.7e-62 242.3 273 48.4
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 9.8e-60 234.6 272 47.8
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 9.2e-58 228.0 278 46.4
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 2.7e-57 226.5 275 45.8
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.1e-55 221.1 279 44.4
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 2.5e-55 219.9 268 45.9
SMO347G0207 Selaginella moellendorffii HOM05D005681 ORTHO05D007274 2.5e-55 219.9 271 46.1
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 3.3e-55 219.5 279 44.4
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 2.1e-54 216.9 274 48.5
DCAR_000748 Daucus carota HOM05D005681 ORTHO05D007274 1.0e-53 214.5 166 65.1
Oeu008286.1 Olea europaea HOM05D005681 ORTHO05D007274 1.0e-53 214.5 154 69.5
Oeu008289.1 Olea europaea HOM05D005681 ORTHO05D007274 3.7e-51 206.1 154 67.5
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 4.9e-51 205.7 270 44.4
BcaNung03601 Brassica carinata HOM05D005681 ORTHO05D007274 8.6e-48 194.9 253 47.4
BraA01t00528Z Brassica rapa HOM05D005681 ORTHO05D007274 1.5e-44 184.1 146 64.4
C07p59310 Brassica napus HOM05D005681 ORTHO05D007274 4.6e-41 172.6 293 40.3
BcaNung04523 Brassica carinata HOM05D005681 ORTHO05D007274 6.8e-37 158.7 210 45.2
AUR62043618 Chenopodium quinoa HOM05D005681 ORTHO05D007274 2.1e-30 137.1 117 60.7
MBI01_g30752_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 2.8e-30 136.7 145 52.4
Oeu012191.1 Olea europaea HOM05D005681 ORTHO05D007274 7.1e-26 122.1 133 48.9
ATR0051G031 Amborella trichopoda HOM05D005681 ORTHO05D007274 3.3e-15 86.7 84 56.0
Oeu031829.2 Olea europaea HOM05D005681 ORTHO05D007274 5.3e-13 79.3 130 42.3


User provided reference genes

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