Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 3.0e-237 824.7 390 100.0
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 6.1e-158 561.2 329 77.5
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 6.1e-158 561.2 383 70.0
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 1.2e-156 557.0 332 75.9
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 2.6e-156 555.8 350 72.6
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 3.4e-156 555.4 363 71.6
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 1.3e-155 553.5 327 77.7
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 1.7e-155 553.1 326 76.7
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 2.2e-155 552.7 332 76.8
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 2.8e-155 552.4 328 76.5
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 2.8e-155 552.4 362 70.2
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 4.9e-155 551.6 350 71.7
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 4.9e-155 551.6 327 77.7
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 6.3e-155 551.2 363 70.8
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 6.3e-155 551.2 377 69.8
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 1.1e-154 550.4 350 72.0
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 1.8e-154 549.7 333 75.1
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 2.4e-154 549.3 317 78.2
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 2.4e-154 549.3 330 76.4
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 3.2e-154 548.9 318 78.6
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 3.2e-154 548.9 328 75.0
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 5.4e-154 548.1 330 76.1
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 5.4e-154 548.1 337 75.4
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 1.2e-153 547.0 390 66.9
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 7.8e-153 544.3 355 72.7
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 1.3e-152 543.5 322 75.2
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 2.3e-152 542.7 327 76.8
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 2.3e-152 542.7 343 74.1
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 2.3e-152 542.7 335 74.9
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 2.9e-152 542.3 349 73.1
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 2.9e-152 542.3 327 75.8
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 3.9e-152 542.0 328 75.6
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 5.0e-152 541.6 327 76.5
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 6.6e-152 541.2 333 74.2
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 2.5e-151 539.3 366 68.6
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 3.3e-151 538.9 366 68.6
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 3.3e-151 538.9 323 75.9
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 3.3e-151 538.9 319 75.5
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 4.3e-151 538.5 368 68.2
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 4.3e-151 538.5 335 74.6
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 9.5e-151 537.3 325 75.7
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 9.5e-151 537.3 325 75.7
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 9.5e-151 537.3 325 75.4
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 1.2e-150 537.0 351 71.2
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 1.6e-150 536.6 327 74.6
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 2.1e-150 536.2 327 74.6
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 2.8e-150 535.8 350 70.6
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 3.6e-150 535.4 330 74.8
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 4.7e-150 535.0 319 75.9
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 8.0e-150 534.3 327 75.2
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 1.0e-149 533.9 315 77.5
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.0e-149 533.9 327 75.2
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 2.3e-149 532.7 367 67.8
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 2.3e-149 532.7 328 73.8
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 3.1e-149 532.3 325 75.1
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 3.1e-149 532.3 334 73.4
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 4.0e-149 531.9 328 72.9
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 5.2e-149 531.6 320 76.2
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 6.8e-149 531.2 327 74.3
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 1.2e-148 530.4 323 74.3
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 1.2e-148 530.4 327 75.2
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 1.5e-148 530.0 353 71.1
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 2.6e-148 529.3 324 75.3
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 2.6e-148 529.3 322 74.8
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 8.3e-147 524.2 350 69.4
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 1.1e-146 523.9 332 73.5
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 1.4e-146 523.5 360 69.7
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 1.9e-146 523.1 315 76.2
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 1.9e-146 523.1 339 70.8
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 3.2e-146 522.3 344 69.8
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 2.0e-145 519.6 338 70.1
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 2.7e-145 519.2 348 70.4
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 4.6e-145 518.5 315 75.6
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 4.6e-145 518.5 315 75.6
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 1.3e-144 516.9 328 72.9
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 3.0e-144 515.8 323 74.3
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 8.6e-144 514.2 315 74.6
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 1.1e-143 513.8 322 74.2
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 1.5e-143 513.5 315 74.6
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 8.1e-142 507.7 333 72.4
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 1.2e-140 503.8 326 70.6
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 3.4e-140 502.3 383 63.2
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 3.7e-139 498.8 344 68.3
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 3.0e-136 489.2 336 70.8
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 1.5e-135 486.9 355 67.0
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 9.5e-135 484.2 295 73.6
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 5.2e-133 478.4 345 66.4
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 2.0e-132 476.5 285 74.0
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 1.7e-131 473.4 357 64.1
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 6.4e-131 471.5 283 74.9
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 1.4e-130 470.3 321 65.7
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.6e-129 466.8 326 64.7
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 2.1e-126 456.4 310 66.8
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 1.1e-125 454.1 307 67.1
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 4.4e-124 448.7 319 66.5
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 1.7e-115 420.2 315 62.2
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 1.2e-113 414.1 581 42.0
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 3.0e-112 409.5 245 77.6
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 2.6e-92 343.2 214 75.2
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 5.9e-92 342.0 270 63.7
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 6.5e-91 338.6 212 72.6
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 8.2e-86 321.6 278 57.6
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 1.4e-80 304.3 351 43.9
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.4e-74 284.3 314 43.6
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 3.2e-74 283.1 313 43.5
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 1.2e-73 281.2 351 40.7
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 4.1e-69 266.2 259 55.6
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 1.8e-48 197.6 135 69.6
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 7.5e-47 192.2 169 58.6
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 9.8e-47 191.8 186 50.0
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 5.4e-45 186.0 126 64.3
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 9.2e-45 185.3 333 36.0
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 2.3e-40 170.6 195 42.6
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 1.2e-33 148.3 204 42.6
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 6.8e-32 142.5 83 75.9
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 1.7e-22 111.3 73 68.5
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 3.8e-14 83.6 83 49.4
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 2.5e-10 70.9 39 74.4
arahy.Tifrunner.gnm1.ann1.W5BQ9H Arachis hypogaea HOM05D006483 ORTHO05D000252 4.3e-10 70.1 56 60.7
Cfa023956 Carpinus fangiana HOM05D026080 ORTHO05D034125 6.2e-09 66.2 118 34.7
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 8.9e-08 62.4 34 73.5
Zm00001eb049690 Zea mays HOM05D003600 ORTHO05D004129 1.7e-06 58.2 35 62.9


User provided reference genes

Program Settings