Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 1.3e-160 569.7 294 100.0
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 4.1e-154 548.1 294 96.3
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 3.4e-100 369.0 276 66.7
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 4.9e-99 365.2 280 65.0
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 6.4e-99 364.8 293 63.5
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 6.4e-99 364.8 293 63.5
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 1.2e-97 360.5 276 64.1
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 1.6e-97 360.1 293 61.8
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 5.9e-97 358.2 279 62.0
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 5.9e-97 358.2 293 60.8
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 7.8e-97 357.8 288 59.7
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 1.3e-96 357.1 279 62.4
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 1.3e-96 357.1 295 63.1
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 1.3e-96 357.1 284 62.7
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 3.9e-96 355.5 287 62.7
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 5.0e-96 355.1 295 62.4
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 1.9e-95 353.2 276 64.5
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 1.9e-95 353.2 279 63.8
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 1.9e-95 353.2 280 63.2
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 2.5e-95 352.8 278 65.1
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 1.2e-94 350.5 281 63.7
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 1.2e-94 350.5 280 63.2
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 1.6e-94 350.1 293 61.1
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 2.1e-94 349.7 293 61.4
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 2.8e-94 349.4 293 60.4
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 3.6e-94 349.0 281 63.3
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 4.7e-94 348.6 294 61.6
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 4.7e-94 348.6 293 62.5
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 4.7e-94 348.6 283 60.8
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 4.7e-94 348.6 281 63.0
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 6.2e-94 348.2 294 61.9
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 1.0e-93 347.4 293 61.1
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 1.0e-93 347.4 296 61.1
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 1.4e-93 347.1 276 63.4
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 2.3e-93 346.3 293 58.0
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 3.1e-93 345.9 274 61.3
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 3.1e-93 345.9 292 58.6
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 4.0e-93 345.5 276 63.0
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 6.8e-93 344.7 294 60.9
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 8.9e-93 344.4 289 59.5
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 1.5e-92 343.6 278 63.3
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 1.5e-92 343.6 276 63.4
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 2.0e-92 343.2 292 59.9
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 3.4e-92 342.4 296 61.1
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 4.4e-92 342.0 282 60.6
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 5.8e-92 341.7 283 61.8
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 7.5e-92 341.3 294 59.9
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 9.8e-92 340.9 272 62.5
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.7e-91 340.1 296 60.1
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 1.7e-91 340.1 276 62.3
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 2.2e-91 339.7 284 58.5
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 3.7e-91 339.0 296 60.8
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 3.7e-91 339.0 276 61.2
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 3.7e-91 339.0 276 60.1
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 4.9e-91 338.6 292 57.5
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 1.1e-90 337.4 279 59.5
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 1.4e-90 337.0 278 62.9
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 4.1e-90 335.5 291 58.8
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 4.1e-90 335.5 293 57.0
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 7.0e-90 334.7 296 58.1
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 1.2e-89 334.0 292 57.5
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 1.2e-89 334.0 292 58.6
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 1.2e-89 334.0 278 62.6
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 1.6e-89 333.6 286 58.4
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 2.0e-89 333.2 296 56.8
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 2.7e-89 332.8 277 61.0
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 3.5e-89 332.4 287 59.6
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 3.5e-89 332.4 278 60.1
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 7.8e-89 331.3 278 63.3
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 7.8e-89 331.3 294 59.2
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 1.0e-88 330.9 294 56.8
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 1.3e-88 330.5 296 56.8
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 3.0e-88 329.3 271 60.5
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 6.6e-88 328.2 288 58.7
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 6.6e-88 328.2 280 60.0
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 6.6e-88 328.2 292 58.2
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 1.1e-87 327.4 286 57.3
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 8.1e-86 321.2 273 59.7
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 8.9e-85 317.8 279 58.8
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 2.6e-84 316.2 360 48.1
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 3.4e-84 315.8 300 57.0
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 7.5e-84 314.7 279 58.4
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 1.7e-83 313.5 277 58.8
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 3.7e-83 312.4 277 59.2
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 3.7e-83 312.4 277 59.2
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 3.7e-83 312.4 277 59.2
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 6.4e-83 311.6 280 58.6
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 8.3e-83 311.2 277 59.2
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 1.9e-82 310.1 288 55.9
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 1.9e-82 310.1 277 58.5
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 2.4e-82 309.7 254 62.6
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 4.1e-82 308.9 280 57.5
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 5.4e-82 308.5 276 57.6
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 9.2e-82 307.8 278 57.6
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 2.1e-81 306.6 281 56.9
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 2.7e-81 306.2 276 57.2
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 3.0e-80 302.8 276 56.9
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 3.9e-80 302.4 279 55.2
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 5.1e-80 302.0 280 56.4
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 8.6e-80 301.2 247 62.3
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 1.4e-77 293.9 271 55.0
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 1.4e-77 293.9 441 40.8
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 1.7e-75 287.0 281 54.4
ECA246G0085 Erigeron canadensis HOM05D005681 ORTHO05D007274 2.9e-75 286.2 245 61.6
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 8.4e-75 284.6 279 53.0
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 4.3e-71 272.3 270 55.2
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 8.9e-69 264.6 261 55.9
CsaV3_2G031020 Cucumis sativus L. HOM05D005681 ORTHO05D007274 2.6e-68 263.1 199 64.3
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 1.3e-67 260.8 273 53.8
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.1e-66 257.7 204 64.7
BolC7t46377H Brassica oleracea HOM05D005681 ORTHO05D007274 2.3e-64 250.0 208 62.0
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 1.5e-63 247.3 273 48.7
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 1.3e-62 244.2 274 49.6
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 2.9e-59 233.0 278 46.0
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 3.8e-59 232.6 275 46.5
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 2.7e-57 226.5 279 44.4
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 6.0e-57 225.3 267 45.7
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.3e-56 224.2 279 44.4
SMO347G0207 Selaginella moellendorffii HOM05D005681 ORTHO05D007274 1.3e-56 224.2 271 46.5
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 7.4e-55 218.4 274 46.7
DCAR_000748 Daucus carota HOM05D005681 ORTHO05D007274 1.3e-54 217.6 166 64.5
Oeu008286.1 Olea europaea HOM05D005681 ORTHO05D007274 1.3e-54 217.6 154 68.8
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 6.9e-53 211.8 270 44.4
Oeu008289.1 Olea europaea HOM05D005681 ORTHO05D007274 1.2e-52 211.1 154 67.5
BcaNung03601 Brassica carinata HOM05D005681 ORTHO05D007274 2.1e-49 200.3 199 55.3
BraA01t00528Z Brassica rapa HOM05D005681 ORTHO05D007274 3.1e-45 186.4 146 64.4
C07p59310 Brassica napus HOM05D005681 ORTHO05D007274 2.5e-42 176.8 293 40.6
BcaNung04523 Brassica carinata HOM05D005681 ORTHO05D007274 1.3e-38 164.5 210 46.2
AUR62043618 Chenopodium quinoa HOM05D005681 ORTHO05D007274 3.6e-33 146.4 117 62.4
MBI01_g30752_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 2.2e-30 137.1 145 53.1
Oeu012191.1 Olea europaea HOM05D005681 ORTHO05D007274 1.6e-25 120.9 133 48.1
ATR0051G031 Amborella trichopoda HOM05D005681 ORTHO05D007274 5.7e-15 85.9 84 54.8
Oeu031829.2 Olea europaea HOM05D005681 ORTHO05D007274 5.3e-13 79.3 130 41.5


User provided reference genes

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