Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_006267 Vanilla planifolia HOM05D003435 ORTHO05D004032 2.9e-66 255.0 122 100.0
HPP92_006187 Vanilla planifolia HOM05D003435 ORTHO05D004032 2.7e-35 152.1 193 49.7
HPP92_006173 Vanilla planifolia HOM05D003435 ORTHO05D004032 4.4e-30 134.8 193 46.1
SalBow5G2384 Salvia bowleyana HOM05D003435 ORTHO05D004032 7.6e-22 107.5 139 48.9
HPP92_008982 Vanilla planifolia HOM05D003435 ORTHO05D004032 7.6e-22 107.5 190 37.4
Aqoxy6G01408_Aqoxy6G01409 Aquilegia oxysepala HOM05D003435 ORTHO05D004032 5.4e-20 101.3 205 37.1
Zm00001eb051800 Zea mays HOM05D003435 ORTHO05D004032 1.0e-18 97.1 185 36.2
FvH4_1g15690 Fragaria vesca HOM05D003435 ORTHO05D004032 1.5e-17 93.2 197 34.0
FAN19G0078 Fragaria x ananassa HOM05D003435 ORTHO05D004032 1.5e-17 93.2 197 34.0
RcHm_v2.0_Chr2g0105001 Rosa chinensis HOM05D003435 ORTHO05D004032 1.5e-17 93.2 197 33.5
FAN28G0748 Fragaria x ananassa HOM05D003435 ORTHO05D004032 1.9e-17 92.8 197 34.0
Nn5g30194 Nelumbo nucifera HOM05D003435 ORTHO05D004032 1.9e-17 92.8 155 38.7
Phvul.003G245800 Phaseolus vulgaris HOM05D003435 ORTHO05D004032 1.9e-17 92.8 200 33.0
PGR119G1381 Punica granatum HOM05D003435 ORTHO05D004032 2.5e-17 92.4 190 36.3
Potri.007G041000 Populus trichocarpa HOM05D003435 ORTHO05D004032 5.6e-17 91.3 200 30.5
FAN23G2700 Fragaria x ananassa HOM05D003435 ORTHO05D004032 7.3e-17 90.9 197 33.5
FAN26G2684 Fragaria x ananassa HOM05D003435 ORTHO05D004032 7.3e-17 90.9 197 33.5
Medtr8g079820 Medicago truncatula HOM05D003435 ORTHO05D004032 1.3e-16 90.1 198 32.3
TAR381G0144 Trochodendron aralioides HOM05D003435 ORTHO05D004032 1.3e-16 90.1 203 34.0
vmacro17935 Vaccinium macrocarpon HOM05D003435 ORTHO05D004032 1.3e-16 90.1 200 34.0
Eucgr.F02662 Eucalyptus grandis HOM05D003435 ORTHO05D004032 1.6e-16 89.7 190 34.2
Sabra07G0036700 Salix brachista HOM05D003435 ORTHO05D004032 2.1e-16 89.4 200 30.0
Lalb_Chr16g0388361 Lupinus albus HOM05D003435 ORTHO05D004032 2.8e-16 89.0 196 33.2
Rhsim08G0102200 Rhododendron simsii HOM05D003435 ORTHO05D004032 2.8e-16 89.0 200 33.5
Eucgr.F01659 Eucalyptus grandis HOM05D003435 ORTHO05D004032 4.8e-16 88.2 190 33.7
arahy.Tifrunner.gnm1.ann1.IHL9QQ Arachis hypogaea HOM05D003435 ORTHO05D004032 6.2e-16 87.8 195 33.8
Glyma.17G176300 Glycine max HOM05D003435 ORTHO05D004032 6.2e-16 87.8 202 32.7
Manes.12G101600 Manihot esculenta HOM05D003435 ORTHO05D004032 6.2e-16 87.8 200 31.0
Potri.005G136300 Populus trichocarpa HOM05D003435 ORTHO05D004032 6.2e-16 87.8 200 32.0
CsaV3_2G016800 Cucumis sativus L. HOM05D003435 ORTHO05D004032 8.1e-16 87.4 201 30.8
VMungo0251G2411 Vigna mungo HOM05D003435 ORTHO05D004032 8.1e-16 87.4 203 32.5
Gohir.A12G070200 Gossypium hirsutum HOM05D003435 ORTHO05D004032 1.1e-15 87.0 194 30.9
PSO675G6314 Papaver somniferum HOM05D003435 ORTHO05D004032 1.1e-15 87.0 198 32.3
Carub.0005s1691 Capsella rubella HOM05D003435 ORTHO05D004032 1.4e-15 86.7 184 36.4
AUR62031680 Chenopodium quinoa HOM05D003435 ORTHO05D004032 1.4e-15 86.7 198 31.3
AUR62032563 Chenopodium quinoa HOM05D003435 ORTHO05D004032 1.4e-15 86.7 198 31.3
ClCG02G012690 Citrullus lanatus HOM05D003435 ORTHO05D004032 1.4e-15 86.7 203 30.5
MELO3C020891.2 Cucumis melo HOM05D003435 ORTHO05D004032 1.4e-15 86.7 203 30.5
Glyma.05G090500 Glycine max HOM05D003435 ORTHO05D004032 1.4e-15 86.7 202 32.2
MD02G1168900 Malus domestica HOM05D003435 ORTHO05D004032 1.4e-15 86.7 161 34.8
MD15G1280900 Malus domestica HOM05D003435 ORTHO05D004032 1.4e-15 86.7 160 34.4
Prupe.7G136400 Prunus persica HOM05D003435 ORTHO05D004032 1.4e-15 86.7 193 32.6
TAR376G0307 Trochodendron aralioides HOM05D003435 ORTHO05D004032 1.4e-15 86.7 206 33.0
Migut.H00454 Erythranthe guttata HOM05D003435 ORTHO05D004032 1.8e-15 86.3 165 33.9
Manes.13G126200 Manihot esculenta HOM05D003435 ORTHO05D004032 1.8e-15 86.3 201 32.3
Sed0012547 Sechium edule HOM05D003435 ORTHO05D004032 1.8e-15 86.3 206 30.1
Ca_22188_v3 Cicer arietinum L. HOM05D003435 ORTHO05D004032 2.4e-15 85.9 198 29.8
COL.COLO4_11380 Corchorus olitorius HOM05D003435 ORTHO05D004032 2.4e-15 85.9 200 32.0
AL5G30740 Arabidopsis lyrata HOM05D003435 ORTHO05D004032 3.1e-15 85.5 173 36.4
AT3G50590 Arabidopsis thaliana HOM05D003435 ORTHO05D004032 3.1e-15 85.5 173 36.4
Gorai.008G074500 Gossypium raimondii HOM05D003435 ORTHO05D004032 3.1e-15 85.5 194 30.9
Lalb_Chr09g0323051 Lupinus albus HOM05D003435 ORTHO05D004032 3.1e-15 85.5 193 33.2
Sp5g11620 Schrenkiella parvula HOM05D003435 ORTHO05D004032 3.1e-15 85.5 185 36.2
VMungo1215G2578 Vigna mungo HOM05D003435 ORTHO05D004032 3.1e-15 85.5 193 30.6
ATR0021G056 Amborella trichopoda HOM05D003435 ORTHO05D004032 4.0e-15 85.1 188 31.9
BcaC07g39520 Brassica carinata HOM05D003435 ORTHO05D004032 4.0e-15 85.1 151 38.4
A09p43620 Brassica napus HOM05D003435 ORTHO05D004032 4.0e-15 85.1 151 38.4
C08p25650 Brassica napus HOM05D003435 ORTHO05D004032 4.0e-15 85.1 151 38.4
BolC8t50184H Brassica oleracea HOM05D003435 ORTHO05D004032 4.0e-15 85.1 151 38.4
BraA09t39823Z Brassica rapa HOM05D003435 ORTHO05D004032 4.0e-15 85.1 151 38.4
Duzib147G1293 Durio zibethinus HOM05D003435 ORTHO05D004032 4.0e-15 85.1 200 30.0
Gohir.D12G088600 Gossypium hirsutum HOM05D003435 ORTHO05D004032 5.3e-15 84.7 194 30.4
PSO541G5504 Papaver somniferum HOM05D003435 ORTHO05D004032 5.3e-15 84.7 198 31.8
SEGI_22339 Sequoiadendron giganteum HOM05D003435 ORTHO05D004032 5.3e-15 84.7 206 33.5
CARHR160100 Cardamine hirsuta HOM05D003435 ORTHO05D004032 6.9e-15 84.3 173 36.4
Thecc.01G052400 Theobroma cacao HOM05D003435 ORTHO05D004032 6.9e-15 84.3 204 31.4
BcaB01g00607 Brassica carinata HOM05D003435 ORTHO05D004032 9.0e-15 84.0 151 37.7
Sc03g0001420 Simmondsia chinensis HOM05D003435 ORTHO05D004032 9.0e-15 84.0 199 30.7
Cc07_g05840 Coffea canephora HOM05D003435 ORTHO05D004032 1.2e-14 83.6 167 36.5
Glyma.01G184500 Glycine max HOM05D003435 ORTHO05D004032 1.2e-14 83.6 189 31.7
Psat4g087800 Pisum sativum HOM05D003435 ORTHO05D004032 1.2e-14 83.6 198 29.3
Aa31LG1G15390 Aethionema arabicum HOM05D003435 ORTHO05D004032 1.5e-14 83.2 181 34.8
Ah.10g029820 Amaranthus hybridus HOM05D003435 ORTHO05D004032 1.5e-14 83.2 163 33.1
CSS0011380 Camellia sinensis var. sinensis HOM05D003435 ORTHO05D004032 1.5e-14 83.2 188 32.4
CSS0024619 Camellia sinensis var. sinensis HOM05D003435 ORTHO05D004032 1.5e-14 83.2 188 32.4
Cfa003996 Carpinus fangiana HOM05D003435 ORTHO05D004032 1.5e-14 83.2 166 34.3
CDE05G0341 Ceratophyllum demersum HOM05D003435 ORTHO05D004032 1.5e-14 83.2 187 32.1
Gohir.D11G197100 Gossypium hirsutum HOM05D003435 ORTHO05D004032 1.5e-14 83.2 195 29.2
Gorai.007G211000 Gossypium raimondii HOM05D003435 ORTHO05D004032 1.5e-14 83.2 195 29.2
CANSAT01G2969 Cannabis sativa HOM05D003435 ORTHO05D004032 2.0e-14 82.8 163 33.1
Haze_15428 Corylus avellana HOM05D003435 ORTHO05D004032 2.0e-14 82.8 167 34.1
THA.LOC104819223 Tarenaya hassleriana HOM05D003435 ORTHO05D004032 2.0e-14 82.8 173 35.8
TPR.G31102 Trifolium pratense HOM05D003435 ORTHO05D004032 2.0e-14 82.8 192 32.3
Cpa.g.sc6.378 Carica papaya HOM05D003435 ORTHO05D004032 2.6e-14 82.4 188 30.9
ECA232G3039 Erigeron canadensis HOM05D003435 ORTHO05D004032 2.6e-14 82.4 185 35.1
Psat2g165400 Pisum sativum HOM05D003435 ORTHO05D004032 2.6e-14 82.4 165 35.2
CAN.G836.66 Capsicum annuum HOM05D003435 ORTHO05D004032 3.4e-14 82.0 163 34.4
Lj4C140G3 Lonicera japonica HOM05D003435 ORTHO05D004032 3.4e-14 82.0 185 34.1
Actinidia02768 Actinidia chinensis HOM05D003435 ORTHO05D004032 4.5e-14 81.6 184 32.6
Thhalv10010058m.g Eutrema salsugineum HOM05D003435 ORTHO05D004032 4.5e-14 81.6 151 37.7
Atru.chr3.398 Acer truncatum HOM05D003435 ORTHO05D004032 5.8e-14 81.3 193 31.6
Solyc02g090570.4 Solanum lycopersicum HOM05D003435 ORTHO05D004032 5.8e-14 81.3 163 34.4
Sopen02g035220 Solanum pennellii HOM05D003435 ORTHO05D004032 5.8e-14 81.3 163 34.4
TPR.G19005 Trifolium pratense HOM05D003435 ORTHO05D004032 5.8e-14 81.3 199 31.7
Ca_24784_v3 Cicer arietinum L. HOM05D003435 ORTHO05D004032 7.6e-14 80.9 194 30.4
Lsat_1_v5_gn_4_167420 Lactuca sativa HOM05D003435 ORTHO05D004032 9.9e-14 80.5 187 34.2
Medtr5g017800 Medicago truncatula HOM05D003435 ORTHO05D004032 9.9e-14 80.5 193 32.1
Nitab4.5_0000310g0180 Nicotiana tabacum HOM05D003435 ORTHO05D004032 1.7e-13 79.7 167 33.5
Nitab4.5_0000961g0120 Nicotiana tabacum HOM05D003435 ORTHO05D004032 1.7e-13 79.7 167 33.5
QL06p042284 Quercus lobata HOM05D003435 ORTHO05D004032 1.7e-13 79.7 199 29.6
CDE05G0324 Ceratophyllum demersum HOM05D003435 ORTHO05D004032 2.9e-13 79.0 155 32.9
Peaxi162Scf00916g00135 Petunia axillaris HOM05D003435 ORTHO05D004032 2.9e-13 79.0 166 33.1
Actinidia16507 Actinidia chinensis HOM05D003435 ORTHO05D004032 4.9e-13 78.2 193 31.1
EL10Ac2g02707 Beta vulgaris HOM05D003435 ORTHO05D004032 6.4e-13 77.8 199 30.2
CiPaw.01G021600 Carya illinoinensis HOM05D003435 ORTHO05D004032 8.4e-13 77.4 164 34.1
Lj2g0013536 Lotus japonicus HOM05D003435 ORTHO05D004032 8.4e-13 77.4 194 31.4
Oeu049304.1 Olea europaea HOM05D003435 ORTHO05D004032 8.4e-13 77.4 167 33.5
Hund13566 Selenicereus undatus HOM05D003435 ORTHO05D004032 8.4e-13 77.4 45 77.8
HanXRQChr14g0430631 Helianthus annuus HOM05D003435 ORTHO05D004032 1.4e-12 76.6 199 31.7
Nn1g05856 Nelumbo nucifera HOM05D003435 ORTHO05D004032 1.4e-12 76.6 206 31.6
Aa31LG4G18760 Aethionema arabicum HOM05D003435 ORTHO05D004032 3.2e-12 75.5 45 71.1
Lj4g0022564 Lotus japonicus HOM05D003435 ORTHO05D004032 3.2e-12 75.5 193 31.1
GSVIVG01002593001 Vitis vinifera HOM05D003435 ORTHO05D004032 4.2e-12 75.1 45 73.3
DCAR_011292 Daucus carota HOM05D003435 ORTHO05D004032 2.1e-11 72.8 45 68.9
SGA_v2.0_scaffold15G07262 Striga asiatica HOM05D003435 ORTHO05D004032 2.1e-11 72.8 45 68.9
TWI53G0909 Tripterygium wilfordii HOM05D003435 ORTHO05D004032 2.7e-11 72.4 45 71.1
MSTRG.23766 Avicennia marina HOM05D003435 ORTHO05D004032 3.5e-11 72.0 45 68.9
Phvul.002G020500 Phaseolus vulgaris HOM05D003435 ORTHO05D004032 7.9e-11 70.9 45 68.9
Ciclev10024690m.g Citrus clementina HOM05D003435 ORTHO05D004032 3.0e-10 68.9 45 62.2
SHI23026 Sapria himalayana HOM05D003435 ORTHO05D004032 1.1e-09 67.0 76 47.4
Mapoly0038s0024 Marchantia polymorpha HOM05D003435 ORTHO05D004032 3.7e-08 62.0 189 25.9
AagrBONN_evm.TU.Sc2ySwM_117.2914 Anthoceros agrestis HOM05D003435 ORTHO05D004032 1.1e-07 60.5 117 35.0
SMO304G0064 Selaginella moellendorffii HOM05D003435 ORTHO05D004032 1.8e-07 59.7 42 57.1
COL.COLO4_18252 Corchorus olitorius HOM05D003435 ORTHO05D004032 5.3e-07 58.2 35 65.7
Psat7g159960 Pisum sativum HOM05D003635 ORTHO05D004283 7.6e-06 54.3 118 28.8


User provided reference genes

Program Settings