Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_006252 Vanilla planifolia HOM05D004997 ORTHO05D005921 1.8e-61 239.2 131 100.0
Nn4g24866 Nelumbo nucifera HOM05D004997 ORTHO05D005921 2.9e-51 205.3 131 80.2
Actinidia07691 Actinidia chinensis HOM05D004997 ORTHO05D005921 3.2e-50 201.8 131 80.9
Dinv32261 Davidia involucrata HOM05D004997 ORTHO05D005921 3.2e-50 201.8 131 80.2
CiPaw.10G092400 Carya illinoinensis HOM05D004997 ORTHO05D005921 4.1e-50 201.4 131 80.9
CDE02G0055 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 5.4e-50 201.1 129 81.4
Cfa000953 Carpinus fangiana HOM05D004997 ORTHO05D005921 7.1e-50 200.7 129 80.6
Eucgr.E02397 Eucalyptus grandis HOM05D004997 ORTHO05D005921 1.2e-49 199.9 131 79.4
Gohir.D05G151300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.2e-49 199.9 130 80.8
Gorai.009G155300 Gossypium raimondii HOM05D004997 ORTHO05D005921 1.2e-49 199.9 130 80.8
Potri.004G131900 Populus trichocarpa HOM05D004997 ORTHO05D005921 1.2e-49 199.9 131 79.4
TWI38G1166 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 1.6e-49 199.5 126 82.5
CSS0020008 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 2.1e-49 199.1 131 78.6
TWI38G0351 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 2.1e-49 199.1 131 79.4
TAR626G0896 Trochodendron aralioides HOM05D004997 ORTHO05D005921 2.7e-49 198.7 131 78.6
CDE09G0791 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 6.0e-49 197.6 129 79.8
CANSAT35G1260 Cannabis sativa HOM05D004997 ORTHO05D005921 7.8e-49 197.2 130 77.7
CiPaw.09G124400 Carya illinoinensis HOM05D004997 ORTHO05D005921 7.8e-49 197.2 131 79.4
MD05G1284500 Malus domestica HOM05D004997 ORTHO05D005921 7.8e-49 197.2 131 78.6
Gohir.A05G148700 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.7e-48 196.1 130 80.0
Gohir.A10G040300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.7e-48 196.1 130 78.5
THA.LOC104814295 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 1.7e-48 196.1 131 77.1
Thecc.06G151500 Theobroma cacao HOM05D004997 ORTHO05D005921 1.7e-48 196.1 130 79.2
SGA_v2.0_scaffold1G00167 Striga asiatica HOM05D004997 ORTHO05D005921 2.3e-48 195.7 126 79.4
Gorai.011G043400 Gossypium raimondii HOM05D004997 ORTHO05D005921 3.0e-48 195.3 130 78.5
MD10G1262900 Malus domestica HOM05D004997 ORTHO05D005921 3.9e-48 194.9 131 77.1
Solyc08g016420.3 Solanum lycopersicum HOM05D004997 ORTHO05D005921 5.1e-48 194.5 131 74.8
MELO3C002717.2 Cucumis melo HOM05D004997 ORTHO05D005921 6.6e-48 194.1 131 76.3
THA.LOC104812669 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 6.6e-48 194.1 131 76.3
ECA233G0220 Erigeron canadensis HOM05D004997 ORTHO05D005921 8.6e-48 193.7 129 78.3
RcHm_v2.0_Chr5g0013981 Rosa chinensis HOM05D004997 ORTHO05D005921 8.6e-48 193.7 131 76.3
Ciclev10017164m.g Citrus clementina HOM05D004997 ORTHO05D005921 1.1e-47 193.4 131 76.3
Prupe.4G079900 Prunus persica HOM05D004997 ORTHO05D005921 1.1e-47 193.4 131 77.1
PSO339G4484 Papaver somniferum HOM05D004997 ORTHO05D005921 1.5e-47 193.0 131 75.6
Phvul.002G321900 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 1.5e-47 193.0 129 77.5
FAN21G2809 Fragaria x ananassa HOM05D004997 ORTHO05D005921 1.9e-47 192.6 131 76.3
HanXRQChr11g0340951 Helianthus annuus HOM05D004997 ORTHO05D005921 1.9e-47 192.6 126 79.4
Sed0005528 Sechium edule HOM05D004997 ORTHO05D005921 1.9e-47 192.6 131 76.3
Sed0006544 Sechium edule HOM05D004997 ORTHO05D005921 1.9e-47 192.6 131 75.6
Sopen08g006800 Solanum pennellii HOM05D004997 ORTHO05D005921 1.9e-47 192.6 131 74.0
Duzib192G0549 Durio zibethinus HOM05D004997 ORTHO05D005921 2.5e-47 192.2 131 78.6
FAN11G3072 Fragaria x ananassa HOM05D004997 ORTHO05D005921 2.5e-47 192.2 130 76.2
MSTRG.7483 Avicennia marina HOM05D004997 ORTHO05D005921 4.3e-47 191.4 126 77.8
CARHR029400 Cardamine hirsuta HOM05D004997 ORTHO05D005921 4.3e-47 191.4 131 75.6
PSO384G3576 Papaver somniferum HOM05D004997 ORTHO05D005921 4.3e-47 191.4 131 74.8
Gorai.002G185400 Gossypium raimondii HOM05D004997 ORTHO05D005921 5.6e-47 191.0 130 78.5
FvH4_3g05660 Fragaria vesca HOM05D004997 ORTHO05D005921 7.3e-47 190.7 130 75.4
unitig_32.g11442 Utricularia gibba HOM05D004997 ORTHO05D005921 9.6e-47 190.3 126 77.0
Carub.0001s2824 Capsella rubella HOM05D004997 ORTHO05D005921 1.2e-46 189.9 131 73.3
Migut.M00914 Erythranthe guttata HOM05D004997 ORTHO05D005921 1.2e-46 189.9 126 77.0
Sp1g25870 Schrenkiella parvula HOM05D004997 ORTHO05D005921 1.2e-46 189.9 131 74.8
Gohir.D10G041200 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.6e-46 189.5 130 76.9
Lj5g0010316 Lotus japonicus HOM05D004997 ORTHO05D005921 1.6e-46 189.5 129 74.4
VMungo0251G3606 Vigna mungo HOM05D004997 ORTHO05D005921 1.6e-46 189.5 129 76.0
Lalb_Chr05g0222161 Lupinus albus HOM05D004997 ORTHO05D005921 2.1e-46 189.1 125 76.8
Lj4g0009583 Lotus japonicus HOM05D004997 ORTHO05D005921 3.6e-46 188.3 129 73.6
AL1G43880 Arabidopsis lyrata HOM05D004997 ORTHO05D005921 4.7e-46 188.0 131 72.5
MSTRG.16239 Avicennia marina HOM05D004997 ORTHO05D005921 4.7e-46 188.0 126 75.4
Glyma.12G006600 Glycine max HOM05D004997 ORTHO05D005921 4.7e-46 188.0 129 74.4
Medtr5g055650 Medicago truncatula HOM05D004997 ORTHO05D005921 1.1e-45 186.8 129 72.9
GSVIVG01021444001 Vitis vinifera HOM05D004997 ORTHO05D005921 1.1e-45 186.8 125 76.8
BcaB07g32600 Brassica carinata HOM05D004997 ORTHO05D005921 1.4e-45 186.4 131 73.3
A09p36530 Brassica napus HOM05D004997 ORTHO05D005921 1.4e-45 186.4 131 73.3
BraA09t39174Z Brassica rapa HOM05D004997 ORTHO05D005921 1.4e-45 186.4 131 73.3
Glyma.08G046600 Glycine max HOM05D004997 ORTHO05D005921 1.8e-45 186.0 129 73.6
Psat2g084800 Pisum sativum HOM05D004997 ORTHO05D005921 1.8e-45 186.0 129 73.6
Aqoxy3G00593 Aquilegia oxysepala HOM05D004997 ORTHO05D005921 4.0e-45 184.9 130 71.5
HanXRQChr01g0020611 Helianthus annuus HOM05D004997 ORTHO05D005921 4.0e-45 184.9 130 76.2
SEGI_33388 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 4.0e-45 184.9 129 72.1
AT1G29990 Arabidopsis thaliana HOM05D004997 ORTHO05D005921 5.2e-45 184.5 129 72.1
BcaC06g35482 Brassica carinata HOM05D004997 ORTHO05D005921 5.2e-45 184.5 130 72.3
C05p28750 Brassica napus HOM05D004997 ORTHO05D005921 5.2e-45 184.5 131 72.5
BolC5t31593H Brassica oleracea HOM05D004997 ORTHO05D005921 5.2e-45 184.5 131 72.5
BolC7t42045H Brassica oleracea HOM05D004997 ORTHO05D005921 5.2e-45 184.5 130 72.3
SGA_v2.0_scaffold333G48998 Striga asiatica HOM05D004997 ORTHO05D005921 5.2e-45 184.5 139 71.2
Os02g0246300 Oryza sativa ssp. japonica HOM05D004997 ORTHO05D005921 1.5e-44 183.0 120 75.8
PGR042G1500 Punica granatum HOM05D004997 ORTHO05D005921 2.6e-44 182.2 131 72.5
Thhalv10009093m.g Eutrema salsugineum HOM05D004997 ORTHO05D005921 3.4e-44 181.8 131 73.3
arahy.Tifrunner.gnm1.ann1.06CE9J Arachis hypogaea HOM05D004997 ORTHO05D005921 7.6e-44 180.6 136 69.9
BcaB03g13847 Brassica carinata HOM05D004997 ORTHO05D005921 2.9e-43 178.7 130 73.1
Manes.11G058500 Manihot esculenta HOM05D004997 ORTHO05D005921 3.8e-43 178.3 113 81.4
FAN25G0101 Fragaria x ananassa HOM05D004997 ORTHO05D005921 1.4e-42 176.4 144 66.7
Gohir.D01G100600 Gossypium hirsutum HOM05D004997 ORTHO05D005921 2.4e-42 175.6 121 78.5
ClCG03G007080 Citrullus lanatus HOM05D004997 ORTHO05D005921 5.4e-42 174.5 186 55.9
MBI07_g26358_MAGBIO Magnolia biondii HOM05D004997 ORTHO05D005921 5.4e-42 174.5 108 81.5
Atru.chr10.1243 Acer truncatum HOM05D004997 ORTHO05D005921 7.1e-42 174.1 113 80.5
TPR.G13287 Trifolium pratense HOM05D004997 ORTHO05D005921 9.3e-42 173.7 126 73.0
ATR0743G157 Amborella trichopoda HOM05D004997 ORTHO05D005921 1.2e-41 173.3 112 80.4
Gorai.002G125400 Gossypium raimondii HOM05D004997 ORTHO05D005921 2.1e-41 172.6 121 76.9
CsaV3_1G032650 Cucumis sativus L. HOM05D004997 ORTHO05D005921 7.8e-41 170.6 113 78.8
Duzib235G0692 Durio zibethinus HOM05D004997 ORTHO05D005921 7.8e-41 170.6 111 81.1
CAN.G134.135 Capsicum annuum HOM05D004997 ORTHO05D000105 1.7e-40 169.5 111 76.6
A07p10100 Brassica napus HOM05D004997 ORTHO05D005921 2.3e-40 169.1 134 68.7
Ah.09g232610 Amaranthus hybridus HOM05D000413 ORTHO05D000292 3.0e-40 168.7 111 76.6
Lsat_1_v5_gn_1_91801 Lactuca sativa HOM05D004997 ORTHO05D005921 8.7e-40 167.2 106 79.2
CAN.G134.136 Capsicum annuum HOM05D004997 ORTHO05D005921 1.1e-39 166.8 111 75.7
AagrBONN_evm.TU.Sc2ySwM_344.2433 Anthoceros agrestis HOM05D004997 ORTHO05D005921 1.5e-39 166.4 131 64.9
CSS0046404 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 1.9e-39 166.0 105 81.0
Hund21531 Selenicereus undatus HOM05D004997 ORTHO05D005921 1.9e-39 166.0 117 71.8
BcaC05g27010 Brassica carinata HOM05D004997 ORTHO05D005921 7.3e-39 164.1 113 76.1
Rhsim13G0211800 Rhododendron simsii HOM05D004997 ORTHO05D005921 7.3e-39 164.1 116 75.0
Mapoly0006s0079 Marchantia polymorpha HOM05D004997 ORTHO05D005921 1.3e-38 163.3 124 68.5
Pp3c22_1770 Physcomitrium patens HOM05D004997 ORTHO05D005921 2.1e-38 162.5 123 65.9
DCAR_027919 Daucus carota HOM05D000413 ORTHO05D000292 2.8e-38 162.2 122 73.0
Prupe.3G104900 Prunus persica HOM05D004997 ORTHO05D005921 3.6e-38 161.8 105 78.1
Cc02_g37190 Coffea canephora HOM05D004997 ORTHO05D005921 6.2e-38 161.0 131 67.9
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 1.1e-37 160.2 129 68.2
arahy.Tifrunner.gnm1.ann1.FF119L Arachis hypogaea HOM05D004997 ORTHO05D005921 1.8e-37 159.5 117 71.8
Zm00001eb238610 Zea mays HOM05D004997 ORTHO05D005921 2.4e-37 159.1 120 70.0
BraA07t28803Z Brassica rapa HOM05D004997 ORTHO05D005921 9.0e-37 157.1 121 70.2
FAN16G0953 Fragaria x ananassa HOM05D004997 ORTHO05D005921 2.6e-36 155.6 105 72.4
C07p15580 Brassica napus HOM05D004997 ORTHO05D005921 2.4e-34 149.1 121 67.8
SMO367G0874 Selaginella moellendorffii HOM05D004997 ORTHO05D005921 3.2e-34 148.7 108 69.4
COL.COLO4_31081 Corchorus olitorius HOM05D004997 ORTHO05D005921 9.3e-34 147.1 87 87.4
EL10Ac8g19712 Beta vulgaris HOM05D004997 ORTHO05D005921 1.2e-33 146.7 163 51.5
vmacro04021 Vaccinium macrocarpon HOM05D004997 ORTHO05D005921 1.6e-33 146.4 87 85.1
Aa31LG6G5670 Aethionema arabicum HOM05D004997 ORTHO05D005921 2.1e-33 146.0 133 62.4
Oeu034156.1 Olea europaea HOM05D004997 ORTHO05D005921 2.7e-33 145.6 92 81.5
PGSC0003DMG400009647 Solanum tuberosum HOM05D004997 ORTHO05D005921 2.7e-33 145.6 92 80.4
Oeu052376.1 Olea europaea HOM05D004997 ORTHO05D005921 1.3e-32 143.3 92 79.3
Sc17g0004940 Simmondsia chinensis HOM05D004997 ORTHO05D005921 3.9e-32 141.7 92 76.1
SEGI_19850 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 5.1e-32 141.4 90 78.9
CAN.G3523.1 Capsicum annuum HOM05D004997 ORTHO05D005921 6.6e-32 141.0 92 77.2
QL06p022817 Quercus lobata HOM05D004997 ORTHO05D005921 6.6e-32 141.0 117 67.5
AUR62039776 Chenopodium quinoa HOM05D004997 ORTHO05D005921 1.5e-31 139.8 84 82.1
arahy.Tifrunner.gnm1.ann1.7IX92P Arachis hypogaea HOM05D004997 ORTHO05D005921 1.9e-31 139.4 89 78.7
CAN.G134.137 Capsicum annuum HOM05D004997 ORTHO05D005921 1.9e-31 139.4 95 74.7
Dinv30737 Davidia involucrata HOM05D004997 ORTHO05D005921 1.9e-31 139.4 92 79.3
Peaxi162Scf01211g00142 Petunia axillaris HOM05D004997 ORTHO05D005921 1.6e-30 136.3 88 78.4
Phvul.009G128800 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 1.6e-30 136.3 87 81.6
Actinidia39569 Actinidia chinensis HOM05D004997 ORTHO05D005921 1.8e-29 132.9 131 59.5
Gohir.D01G149300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 2.0e-28 129.4 95 74.7
SalBow8G3614 Salvia bowleyana HOM05D004997 ORTHO05D005921 1.9e-26 122.9 101 67.3
Nitab4.5_0010327g0020 Nicotiana tabacum HOM05D004997 ORTHO05D005921 4.2e-26 121.7 92 71.7
Lsat_1_v5_gn_5_30841 Lactuca sativa HOM05D004997 ORTHO05D005921 5.5e-26 121.3 71 85.9
Nitab4.5_0000348g0240 Nicotiana tabacum HOM05D004997 ORTHO05D005921 5.5e-26 121.3 92 71.7
CDE02G2003 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 6.0e-25 117.9 88 72.7
Haze_05586 Corylus avellana HOM05D004997 ORTHO05D005921 2.8e-22 109.0 77 75.3
Sabra04G0085700 Salix brachista HOM05D004997 ORTHO05D005921 5.3e-21 104.8 63 84.1
AUR62030207 Chenopodium quinoa HOM05D004997 ORTHO05D005921 7.6e-20 100.9 61 83.6
PRCOL_00000028 Prasinoderma coloniale HOM05D004997 ORTHO05D005921 7.6e-20 100.9 124 45.2
Manes.09G021201 Manihot esculenta HOM05D004997 ORTHO05D005921 2.2e-19 99.4 111 55.9
Zm00001eb258640 Zea mays HOM05D004997 ORTHO05D005921 1.2e-17 93.6 67 67.2
Zm00001eb151600 Zea mays HOM05D000394 ORTHO05D016690 3.5e-17 92.0 64 68.8
MCO01G210 Micromonas commoda HOM05D004997 ORTHO05D005921 6.0e-17 91.3 116 41.4
Zm00001eb310800 Zea mays HOM05D000394 ORTHO05D016690 1.0e-16 90.5 64 67.2
Zm00001eb139040 Zea mays HOM05D000901 ORTHO05D005921 1.8e-16 89.7 78 57.7
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 1.1e-15 87.0 66 62.1
Zm00001eb269380 Zea mays HOM05D000901 ORTHO05D005921 1.5e-15 86.7 65 64.6
Zm00001eb344510 Zea mays HOM05D000901 ORTHO05D000768 1.3e-14 83.6 68 58.8
Cre12.g502750 Chlamydomonas reinhardtii HOM05D004997 ORTHO05D005921 3.7e-14 82.0 114 39.5
Haze_05599 Corylus avellana HOM05D004997 ORTHO05D005921 2.0e-12 76.3 51 78.4
CBR_g48714 Chara braunii HOM05D004997 ORTHO05D005921 8.4e-11 70.9 120 40.0
Cfa022129 Carpinus fangiana HOM05D004997 ORTHO05D005921 2.1e-09 66.2 120 31.7
arahy.Tifrunner.gnm1.ann1.MPJ1GQ Arachis hypogaea HOM05D004997 ORTHO05D005921 3.7e-06 55.5 51 52.9


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