Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_006247 Vanilla planifolia HOM05D000434 ORTHO05D007220 1.6e-244 849.0 423 100.0
TAR371G0697 Trochodendron aralioides HOM05D000434 ORTHO05D007220 6.4e-185 651.0 419 76.6
Os12g0290150 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D007220 1.9e-181 639.4 412 74.0
Nn3g16677 Nelumbo nucifera HOM05D000434 ORTHO05D007220 4.7e-180 634.8 415 75.2
arahy.Tifrunner.gnm1.ann1.NJ3BP6 Arachis hypogaea HOM05D000434 ORTHO05D007220 4.0e-179 631.7 412 74.8
arahy.Tifrunner.gnm1.ann1.T2T4K7 Arachis hypogaea HOM05D000434 ORTHO05D007220 6.8e-179 630.9 412 74.8
TAR629G3010 Trochodendron aralioides HOM05D000434 ORTHO05D007220 8.9e-179 630.6 400 77.0
Eucgr.K02783 Eucalyptus grandis HOM05D000434 ORTHO05D007220 2.0e-178 629.4 413 74.6
Dinv38518 Davidia involucrata HOM05D000434 ORTHO05D007220 9.9e-178 627.1 416 74.3
QL10p006642 Quercus lobata HOM05D000434 ORTHO05D007220 4.1e-176 621.7 411 74.7
Cc04_g11340 Coffea canephora HOM05D000434 ORTHO05D007220 5.4e-176 621.3 417 72.7
Hund05601 Selenicereus undatus HOM05D000434 ORTHO05D007220 5.4e-176 621.3 415 72.5
Potri.015G085300 Populus trichocarpa HOM05D000434 ORTHO05D007220 7.1e-176 620.9 412 74.3
Sc04g0001370 Simmondsia chinensis HOM05D000434 ORTHO05D007220 7.1e-176 620.9 415 74.9
TWI23G1317 Tripterygium wilfordii HOM05D000434 ORTHO05D007220 7.1e-176 620.9 416 72.6
COL.COLO4_20642 Corchorus olitorius HOM05D000434 ORTHO05D007220 9.2e-176 620.5 412 73.1
Sabra15G0108200 Salix brachista HOM05D000434 ORTHO05D007220 1.2e-175 620.2 412 74.0
Lalb_Chr07g0183031 Lupinus albus HOM05D000434 ORTHO05D007220 2.1e-175 619.4 416 72.1
Cfa019232 Carpinus fangiana HOM05D000434 ORTHO05D007220 2.7e-175 619.0 411 75.4
CANSAT80G0711 Cannabis sativa HOM05D000434 ORTHO05D007220 1.0e-174 617.1 412 73.5
PSO063G6548 Papaver somniferum HOM05D000434 ORTHO05D007220 1.7e-174 616.3 413 73.6
Atru.chr9.2596 Acer truncatum HOM05D000434 ORTHO05D007220 5.1e-174 614.8 421 71.5
Gorai.001G064000 Gossypium raimondii HOM05D000434 ORTHO05D007220 8.7e-174 614.0 412 72.6
Gohir.D07G060300 Gossypium hirsutum HOM05D000434 ORTHO05D007220 1.5e-173 613.2 412 72.3
Duzib205G0335 Durio zibethinus HOM05D000434 ORTHO05D007220 2.5e-173 612.5 412 72.1
Gohir.A07G056000 Gossypium hirsutum HOM05D000434 ORTHO05D007220 2.5e-173 612.5 412 72.3
Sed0007484 Sechium edule HOM05D000434 ORTHO05D007220 2.5e-173 612.5 413 71.2
Cpa.g.sc159.10 Carica papaya HOM05D000434 ORTHO05D007220 3.3e-173 612.1 415 72.3
CiPaw.11G018700 Carya illinoinensis HOM05D000434 ORTHO05D007220 4.3e-173 611.7 411 74.2
CSS0021677 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D007220 5.6e-173 611.3 412 73.5
Glyma.05G042400 Glycine max HOM05D000434 ORTHO05D007220 5.6e-173 611.3 412 73.8
PSO754G0033 Papaver somniferum HOM05D000434 ORTHO05D007220 5.6e-173 611.3 413 72.9
Phvul.003G202900 Phaseolus vulgaris HOM05D000434 ORTHO05D007220 5.6e-173 611.3 416 73.3
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 9.6e-173 610.5 417 72.9
Thecc.03G116400 Theobroma cacao HOM05D000434 ORTHO05D007220 2.1e-172 609.4 412 72.3
THA.LOC104824992 Tarenaya hassleriana HOM05D000434 ORTHO05D007220 2.8e-172 609.0 412 71.8
Aqoxy5G03714 Aquilegia oxysepala HOM05D000434 ORTHO05D007220 3.6e-172 608.6 415 72.0
EL10Ac7g17990 Beta vulgaris HOM05D000434 ORTHO05D007220 3.6e-172 608.6 415 71.8
ClCG03G003080 Citrullus lanatus HOM05D000434 ORTHO05D007220 6.2e-172 607.8 415 70.8
vmacro16649 Vaccinium macrocarpon HOM05D000434 ORTHO05D007220 6.2e-172 607.8 459 67.1
Manes.14G059700 Manihot esculenta HOM05D000434 ORTHO05D007220 1.1e-171 607.1 412 70.6
TWI39G0950 Tripterygium wilfordii HOM05D000434 ORTHO05D007220 1.1e-171 607.1 418 71.5
Ca_19423_v3 Cicer arietinum L. HOM05D000434 ORTHO05D007220 3.1e-171 605.5 412 72.8
VMungo1215G0744 Vigna mungo HOM05D000434 ORTHO05D007220 6.9e-171 604.4 412 73.1
MELO3C002307.2 Cucumis melo HOM05D000434 ORTHO05D007220 9.0e-171 604.0 413 70.2
FAN04G2744 Fragaria x ananassa HOM05D000434 ORTHO05D007220 9.0e-171 604.0 416 71.9
Medtr4g104680 Medicago truncatula HOM05D000434 ORTHO05D007220 2.0e-170 602.8 414 73.4
Ciclev10019026m.g Citrus clementina HOM05D000434 ORTHO05D007220 2.6e-170 602.4 413 72.2
Prupe.5G164300 Prunus persica HOM05D000434 ORTHO05D007220 2.6e-170 602.4 416 72.4
GSVIVG01007621001 Vitis vinifera HOM05D000434 ORTHO05D007220 2.6e-170 602.4 418 72.0
Lj5A131T30 Lonicera japonica HOM05D000434 ORTHO05D007220 7.6e-170 600.9 451 67.2
HanXRQChr16g0504771 Helianthus annuus HOM05D000434 ORTHO05D007220 9.9e-170 600.5 412 71.8
Lj4g0018547 Lotus japonicus HOM05D000434 ORTHO05D007220 9.9e-170 600.5 412 72.1
RcHm_v2.0_Chr7g0192351 Rosa chinensis HOM05D000434 ORTHO05D007220 9.9e-170 600.5 412 71.8
CsaV3_1G008930 Cucumis sativus L. HOM05D000434 ORTHO05D007220 1.3e-169 600.1 411 70.3
FAN08G1614 Fragaria x ananassa HOM05D000434 ORTHO05D007220 1.3e-169 600.1 416 71.2
Solyc03g112060.3 Solanum lycopersicum HOM05D000434 ORTHO05D007220 1.7e-169 599.7 412 71.1
FAN13G1139 Fragaria x ananassa HOM05D000434 ORTHO05D007220 2.9e-169 599.0 416 71.4
MD06G1164800 Malus domestica HOM05D000434 ORTHO05D007220 3.8e-169 598.6 416 71.9
AUR62022128 Chenopodium quinoa HOM05D000434 ORTHO05D007220 4.9e-169 598.2 420 70.2
Thhalv10012812m.g Eutrema salsugineum HOM05D000434 ORTHO05D007220 4.9e-169 598.2 417 69.8
Psat4g061760 Pisum sativum HOM05D000434 ORTHO05D007220 4.9e-169 598.2 413 73.1
Sopen03g031160 Solanum pennellii HOM05D000434 ORTHO05D007220 4.9e-169 598.2 412 70.9
MD14G1170100 Malus domestica HOM05D000434 ORTHO05D007220 1.1e-168 597.0 416 71.6
Rhsim12G0168600 Rhododendron simsii HOM05D000434 ORTHO05D007220 1.9e-168 596.3 398 75.1
AUR62001201 Chenopodium quinoa HOM05D000434 ORTHO05D007220 2.4e-168 595.9 411 71.3
FAN18G4510 Fragaria x ananassa HOM05D000434 ORTHO05D007220 2.4e-168 595.9 416 70.9
Haze_07599 Corylus avellana HOM05D000434 ORTHO05D007220 5.4e-168 594.7 457 67.6
PGSC0003DMG400018194 Solanum tuberosum HOM05D000434 ORTHO05D007220 5.4e-168 594.7 412 70.9
Aa31sc402G20 Aethionema arabicum HOM05D000434 ORTHO05D007220 2.7e-167 592.4 412 71.4
FvH4_5g06430 Fragaria vesca HOM05D000434 ORTHO05D007220 2.7e-167 592.4 416 70.4
AT5G50210 Arabidopsis thaliana HOM05D000434 ORTHO05D007220 4.6e-167 591.7 417 69.5
CARHR258410 Cardamine hirsuta HOM05D000434 ORTHO05D007220 4.6e-167 591.7 417 69.5
ATR0122G015 Amborella trichopoda HOM05D000434 ORTHO05D007220 7.8e-167 590.9 412 69.9
Lsat_1_v5_gn_4_79240 Lactuca sativa HOM05D000434 ORTHO05D007220 7.8e-167 590.9 414 72.0
BcaB08g35393 Brassica carinata HOM05D000434 ORTHO05D007220 1.0e-166 590.5 412 70.4
AL8G24240 Arabidopsis lyrata HOM05D000434 ORTHO05D007220 1.3e-166 590.1 417 69.3
PGR044G1593 Punica granatum HOM05D000434 ORTHO05D007220 1.7e-166 589.7 413 70.2
A10p08480 Brassica napus HOM05D000434 ORTHO05D007220 3.0e-166 589.0 417 69.3
BraSC37t46157Z Brassica rapa HOM05D000434 ORTHO05D007220 3.0e-166 589.0 417 69.3
CAN.G126.48 Capsicum annuum HOM05D000434 ORTHO05D007220 3.9e-166 588.6 412 69.9
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 3.9e-166 588.6 398 72.9
Carub.0008s1022 Capsella rubella HOM05D000434 ORTHO05D007220 5.1e-166 588.2 412 69.4
Manes.06G111600 Manihot esculenta HOM05D000434 ORTHO05D007220 5.1e-166 588.2 412 70.4
Sp6g12320 Schrenkiella parvula HOM05D000434 ORTHO05D007220 8.7e-166 587.4 417 68.6
Nitab4.5_0002522g0070 Nicotiana tabacum HOM05D000434 ORTHO05D007220 1.9e-165 586.3 415 69.9
BcaC04g20813 Brassica carinata HOM05D000434 ORTHO05D007220 3.3e-165 585.5 417 68.8
C09p38860 Brassica napus HOM05D000434 ORTHO05D007220 3.3e-165 585.5 417 68.8
BolC9t56752H Brassica oleracea HOM05D000434 ORTHO05D007220 3.3e-165 585.5 417 68.8
Migut.O00172 Erythranthe guttata HOM05D000434 ORTHO05D007220 4.3e-165 585.1 414 70.8
CDE09G1335 Ceratophyllum demersum HOM05D000434 ORTHO05D007220 1.6e-164 583.2 412 69.2
Nitab4.5_0008037g0020 Nicotiana tabacum HOM05D000434 ORTHO05D007220 2.1e-164 582.8 412 70.1
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 4.8e-164 581.6 443 65.9
unitig_8.g3068 Utricularia gibba HOM05D000434 ORTHO05D007220 3.8e-161 572.0 420 68.1
Peaxi162Scf00089g01235 Petunia axillaris HOM05D000434 ORTHO05D007220 7.4e-157 557.8 412 67.5
SEGI_39802 Sequoiadendron giganteum HOM05D000434 ORTHO05D007220 7.6e-154 547.7 413 66.1
Dinv20591 Davidia involucrata HOM05D000434 ORTHO05D007220 6.4e-153 544.7 360 73.9
SalBow5G4295 Salvia bowleyana HOM05D000434 ORTHO05D007220 3.5e-151 538.9 390 68.5
SalBow5G3182 Salvia bowleyana HOM05D000434 ORTHO05D007220 1.0e-150 537.3 390 68.2
Glyma.17G125100 Glycine max HOM05D000434 ORTHO05D007220 3.7e-148 528.9 364 71.2
AagrBONN_evm.TU.Sc2ySwM_368.2356 Anthoceros agrestis HOM05D000434 ORTHO05D007220 4.5e-146 521.9 413 65.6
SMO367G0357 Selaginella moellendorffii HOM05D000434 ORTHO05D007220 1.7e-145 520.0 413 63.0
Pp3c19_15510 Physcomitrium patens HOM05D000434 ORTHO05D007220 1.8e-139 500.0 412 61.9
Psat5g209640 Pisum sativum HOM05D000434 ORTHO05D007220 9.0e-139 497.7 382 66.8
Pp3c22_13970 Physcomitrium patens HOM05D000434 ORTHO05D007220 1.2e-138 497.3 412 60.9
CBR_g20372 Chara braunii HOM05D000434 ORTHO05D007220 1.9e-133 479.9 439 58.3
Mapoly0102s0006 Marchantia polymorpha HOM05D000434 ORTHO05D007220 6.5e-129 464.9 418 58.4
CBR_g50939 Chara braunii HOM05D000434 ORTHO05D007220 2.7e-127 459.5 420 58.6
Cre06.g251450 Chlamydomonas reinhardtii HOM05D000434 ORTHO05D007220 3.3e-117 426.0 421 53.9
MCO05G483 Micromonas commoda HOM05D000434 ORTHO05D007220 4.2e-112 409.1 417 51.6
Actinidia08038 Actinidia chinensis HOM05D000434 ORTHO05D007220 2.0e-109 400.2 273 73.3
Psat0s171g0040 Pisum sativum HOM05D000434 ORTHO05D007220 8.2e-108 394.8 319 66.1
Psat0s2371g0040 Pisum sativum HOM05D000434 ORTHO05D006824 8.2e-108 394.8 319 66.1
PRCOL_00006555 Prasinoderma coloniale HOM05D000434 ORTHO05D007220 2.3e-102 376.7 424 49.3
ECA232G0018 Erigeron canadensis HOM05D000434 ORTHO05D007220 9.5e-96 354.8 223 76.7
Oeu019426.1 Olea europaea HOM05D000434 ORTHO05D007220 5.4e-75 285.8 257 60.3
Oeu036497.1 Olea europaea HOM05D000434 ORTHO05D007220 1.4e-70 271.2 174 77.0
Psat5g059720 Pisum sativum HOM05D000434 ORTHO05D007220 4.9e-68 262.7 179 73.2
SGA_v2.0_scaffold90G27826 Striga asiatica HOM05D000434 ORTHO05D007220 1.7e-65 254.2 196 64.8
SEGI_28653 Sequoiadendron giganteum HOM05D000434 ORTHO05D007220 1.2e-61 241.5 205 59.5
SEGI_19957 Sequoiadendron giganteum HOM05D000434 ORTHO05D007220 1.3e-60 238.0 149 77.9
Psat5g059840 Pisum sativum HOM05D000434 ORTHO05D007220 6.6e-57 225.7 173 66.5
Zm00001eb130060 Zea mays HOM05D000434 ORTHO05D007220 9.9e-45 185.3 114 82.5
Phvul.010G094450 Phaseolus vulgaris HOM05D000434 ORTHO05D007220 4.0e-38 163.3 139 58.3
Psat5g252760 Pisum sativum HOM05D000434 ORTHO05D007220 1.3e-36 158.3 107 75.7
Nn4g22565 Nelumbo nucifera HOM05D000434 ORTHO05D007220 7.9e-34 149.1 159 52.8
Psat5g252720 Pisum sativum HOM05D000434 ORTHO05D007220 1.1e-32 145.2 87 82.8
SGA_v2.0_scaffold106G30573 Striga asiatica HOM05D000434 ORTHO05D007220 3.4e-29 133.7 230 39.1
RcHm_v2.0_Chr5g0014091 Rosa chinensis HOM05D000434 ORTHO05D007220 5.8e-29 132.9 98 64.3
Actinidia08037 Actinidia chinensis HOM05D000434 ORTHO05D007220 1.1e-16 92.0 70 60.0
Psat6g059000 Pisum sativum HOM05D002708 ORTHO05D003516 4.3e-16 90.1 65 61.5
vmacro22879 Vaccinium macrocarpon HOM05D000434 ORTHO05D007220 1.7e-12 78.2 100 48.0
Potri.012G089500 Populus trichocarpa HOM05D000434 ORTHO05D007220 3.0e-09 67.4 40 80.0
Dinv15211 Davidia involucrata HOM05D000434 ORTHO05D007220 6.7e-09 66.2 40 77.5
Haze_12268 Corylus avellana HOM05D000434 ORTHO05D008848 1.1e-08 65.5 134 36.6
Duzib106G1095 Durio zibethinus HOM05D000480 ORTHO05D000313 5.3e-06 56.6 33 78.8


User provided reference genes

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