Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_006202 Vanilla planifolia HOM05D005613 ORTHO05D006903 9.6e-92 340.1 168 100.0
PSO017G3077 Papaver somniferum HOM05D005613 ORTHO05D006903 1.3e-69 266.5 156 84.0
PSO017G2706 Papaver somniferum HOM05D005613 ORTHO05D006903 3.9e-69 265.0 156 83.3
PSO478G0845 Papaver somniferum HOM05D005613 ORTHO05D006903 3.9e-69 265.0 156 83.3
Eucgr.K02737 Eucalyptus grandis HOM05D005613 ORTHO05D006903 1.5e-68 263.1 156 82.7
PSO675G0985 Papaver somniferum HOM05D005613 ORTHO05D006903 1.5e-68 263.1 156 82.7
Manes.06G118100 Manihot esculenta HOM05D005613 ORTHO05D006903 4.3e-68 261.5 156 82.1
TAR371G0420 Trochodendron aralioides HOM05D005613 ORTHO05D006903 4.3e-68 261.5 156 80.8
Aqoxy22s001 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 9.6e-68 260.4 156 80.8
Aqoxy5G04126 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 9.6e-68 260.4 156 80.8
CiPaw.12G041000 Carya illinoinensis HOM05D005613 ORTHO05D006903 1.3e-67 260.0 156 80.8
Thecc.03G126700 Theobroma cacao HOM05D005613 ORTHO05D006903 1.3e-67 260.0 156 82.7
GSVIVG01008514001 Vitis vinifera HOM05D005613 ORTHO05D006903 1.6e-67 259.6 156 82.1
Ciclev10021465m.g Citrus clementina HOM05D005613 ORTHO05D006903 2.8e-67 258.8 164 78.0
PGR044G0561 Punica granatum HOM05D005613 ORTHO05D006903 2.8e-67 258.8 164 78.7
CiPaw.11G009100 Carya illinoinensis HOM05D005613 ORTHO05D006903 4.8e-67 258.1 156 81.4
Lj9C477T8 Lonicera japonica HOM05D005613 ORTHO05D006903 4.8e-67 258.1 163 77.3
Nn4g22373 Nelumbo nucifera HOM05D005613 ORTHO05D006903 6.3e-67 257.7 156 82.7
QL10p004130 Quercus lobata HOM05D005613 ORTHO05D006903 6.3e-67 257.7 156 80.8
TWI23G0755 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 6.3e-67 257.7 156 80.1
QL10p004191 Quercus lobata HOM05D005613 ORTHO05D006903 1.1e-66 256.9 156 80.8
Zm00001eb265520 Zea mays HOM05D005613 ORTHO05D006903 1.4e-66 256.5 155 80.6
Duzib205G1234 Durio zibethinus HOM05D005613 ORTHO05D006903 1.8e-66 256.1 156 81.4
arahy.Tifrunner.gnm1.ann1.91S2FI Arachis hypogaea HOM05D005613 ORTHO05D006903 2.4e-66 255.8 156 81.4
Haze_07235 Corylus avellana HOM05D005613 ORTHO05D006903 3.1e-66 255.4 156 80.1
Glyma.04G194500 Glycine max HOM05D005613 ORTHO05D006903 3.1e-66 255.4 156 80.1
Actinidia25589 Actinidia chinensis HOM05D005613 ORTHO05D006903 6.9e-66 254.2 156 79.5
Gohir.A07G051800 Gossypium hirsutum HOM05D005613 ORTHO05D006903 6.9e-66 254.2 156 80.1
ClCG03G003690 Citrullus lanatus HOM05D005613 ORTHO05D006903 9.0e-66 253.8 156 81.4
CsaV3_1G009570 Cucumis sativus L. HOM05D005613 ORTHO05D006903 9.0e-66 253.8 156 80.8
Medtr3g089010 Medicago truncatula HOM05D005613 ORTHO05D006903 9.0e-66 253.8 156 79.5
Gohir.D07G056300 Gossypium hirsutum HOM05D005613 ORTHO05D006903 1.2e-65 253.4 156 80.1
Gorai.001G059700 Gossypium raimondii HOM05D005613 ORTHO05D006903 1.2e-65 253.4 156 80.1
arahy.Tifrunner.gnm1.ann1.AY81KB Arachis hypogaea HOM05D005613 ORTHO05D006903 1.5e-65 253.1 156 80.8
CSS0000406 Camellia sinensis var. sinensis HOM05D005613 ORTHO05D006903 1.5e-65 253.1 164 76.2
MELO3C002354.2 Cucumis melo HOM05D005613 ORTHO05D006903 1.5e-65 253.1 156 80.8
Lj1g0013310 Lotus japonicus HOM05D005613 ORTHO05D006903 1.5e-65 253.1 156 80.1
Psat5g169720 Pisum sativum HOM05D005613 ORTHO05D006903 1.5e-65 253.1 156 78.8
Prupe.5G152900 Prunus persica HOM05D005613 ORTHO05D006903 1.5e-65 253.1 165 76.4
SalBow7G2516 Salvia bowleyana HOM05D005613 ORTHO05D006903 1.5e-65 253.1 157 77.7
RcHm_v2.0_Chr7g0190451 Rosa chinensis HOM05D005613 ORTHO05D006903 2.0e-65 252.7 156 77.6
Glyma.06G171500 Glycine max HOM05D005613 ORTHO05D006903 2.6e-65 252.3 156 79.5
Dinv11157 Davidia involucrata HOM05D005613 ORTHO05D006903 4.5e-65 251.5 156 77.6
FvH4_5g07950 Fragaria vesca HOM05D005613 ORTHO05D006903 4.5e-65 251.5 156 76.3
FAN18G4059 Fragaria x ananassa HOM05D005613 ORTHO05D006903 4.5e-65 251.5 156 76.3
DCAR_016405 Daucus carota HOM05D005613 ORTHO05D006903 5.9e-65 251.1 156 76.9
TWI39G1237 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 5.9e-65 251.1 156 78.2
arahy.Tifrunner.gnm1.ann1.LN4RIT Arachis hypogaea HOM05D005613 ORTHO05D006903 7.6e-65 250.8 156 80.1
FAN13G2894 Fragaria x ananassa HOM05D005613 ORTHO05D006903 7.6e-65 250.8 156 76.3
Manes.14G052800 Manihot esculenta HOM05D005613 ORTHO05D006903 7.6e-65 250.8 156 78.8
Potri.015G093500 Populus trichocarpa HOM05D005613 ORTHO05D006903 7.6e-65 250.8 164 75.6
Hund02427 Selenicereus undatus HOM05D005613 ORTHO05D006903 1.0e-64 250.4 156 77.6
FAN08G1682 Fragaria x ananassa HOM05D005613 ORTHO05D006903 1.3e-64 250.0 156 75.6
MD06G1143700 Malus domestica HOM05D005613 ORTHO05D006903 2.9e-64 248.8 164 75.6
Nitab4.5_0007541g0020 Nicotiana tabacum HOM05D005613 ORTHO05D006903 2.9e-64 248.8 158 74.1
Nitab4.5_0011040g0030 Nicotiana tabacum HOM05D005613 ORTHO05D006903 2.9e-64 248.8 158 74.1
Phvul.009G167500 Phaseolus vulgaris HOM05D005613 ORTHO05D006903 2.9e-64 248.8 155 79.4
vmacro19214 Vaccinium macrocarpon HOM05D005613 ORTHO05D006903 2.9e-64 248.8 156 76.9
CANSAT80G2472 Cannabis sativa HOM05D005613 ORTHO05D006903 3.8e-64 248.4 156 76.3
Lsat_1_v5_gn_4_76740 Lactuca sativa HOM05D005613 ORTHO05D006903 3.8e-64 248.4 156 78.2
THA.LOC104803145 Tarenaya hassleriana HOM05D005613 ORTHO05D006903 3.8e-64 248.4 156 76.9
Actinidia15836 Actinidia chinensis HOM05D005613 ORTHO05D006903 5.0e-64 248.1 156 77.6
COL.COLO4_28085 Corchorus olitorius HOM05D005613 ORTHO05D006903 5.0e-64 248.1 156 78.2
Migut.N02308 Erythranthe guttata HOM05D005613 ORTHO05D006903 5.0e-64 248.1 158 76.6
MD14G1159000 Malus domestica HOM05D005613 ORTHO05D006903 5.0e-64 248.1 164 75.0
CAN.G767.35 Capsicum annuum HOM05D005613 ORTHO05D006903 6.5e-64 247.7 156 75.6
TPR.G26132 Trifolium pratense HOM05D005613 ORTHO05D006903 6.5e-64 247.7 153 79.1
Lalb_Chr11g0069651 Lupinus albus HOM05D005613 ORTHO05D006903 8.4e-64 247.3 164 74.4
ECA232G4063 Erigeron canadensis HOM05D005613 ORTHO05D006903 1.4e-63 246.5 156 76.9
PGSC0003DMG400004674 Solanum tuberosum HOM05D005613 ORTHO05D006903 1.4e-63 246.5 156 74.4
MSTRG.17588 Avicennia marina HOM05D005613 ORTHO05D006903 1.9e-63 246.1 161 75.8
Solyc12g098640.3 Solanum lycopersicum HOM05D005613 ORTHO05D006903 2.5e-63 245.7 156 73.7
Aa31LG3G6910 Aethionema arabicum HOM05D005613 ORTHO05D006903 4.2e-63 245.0 156 77.6
CARHR258110 Cardamine hirsuta HOM05D005613 ORTHO05D006903 4.2e-63 245.0 156 76.9
AL8G24500 Arabidopsis lyrata HOM05D005613 ORTHO05D006903 5.5e-63 244.6 156 76.9
AT5G50375 Arabidopsis thaliana HOM05D005613 ORTHO05D006903 7.2e-63 244.2 156 76.9
Thhalv10014300m.g Eutrema salsugineum HOM05D005613 ORTHO05D006903 7.2e-63 244.2 156 76.9
HanXRQChr09g0273061 Helianthus annuus HOM05D005613 ORTHO05D006903 9.3e-63 243.8 156 76.9
Sopen12g033400 Solanum pennellii HOM05D005613 ORTHO05D006903 1.2e-62 243.4 156 73.1
Sed0021273 Sechium edule HOM05D005613 ORTHO05D006903 1.6e-62 243.0 156 78.2
AUR62032039 Chenopodium quinoa HOM05D005613 ORTHO05D006903 3.5e-62 241.9 156 75.6
AUR62032713 Chenopodium quinoa HOM05D005613 ORTHO05D006903 3.5e-62 241.9 153 77.1
Carub.0008s1047 Capsella rubella HOM05D005613 ORTHO05D006903 4.6e-62 241.5 156 75.6
Cc00_g03610 Coffea canephora HOM05D005613 ORTHO05D006903 4.6e-62 241.5 156 73.7
EL10Ac5g11023 Beta vulgaris HOM05D005613 ORTHO05D006903 6.1e-62 241.1 155 75.5
CDE02G3999 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 6.1e-62 241.1 157 75.2
BcaB01g02892 Brassica carinata HOM05D005613 ORTHO05D006903 7.9e-62 240.7 156 76.3
BcaC01g04807 Brassica carinata HOM05D005613 ORTHO05D006903 1.3e-61 240.0 156 76.3
C03p33570 Brassica napus HOM05D005613 ORTHO05D006903 1.3e-61 240.0 156 76.3
BolC3t15677H Brassica oleracea HOM05D005613 ORTHO05D006903 1.3e-61 240.0 156 76.3
BraA03t11994Z Brassica rapa HOM05D005613 ORTHO05D006903 1.3e-61 240.0 156 75.6
VMungo1309G0937 Vigna mungo HOM05D005613 ORTHO05D006903 1.3e-61 240.0 150 80.0
CDE09G1331 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 2.3e-61 239.2 157 75.2
Cc07_g17610 Coffea canephora HOM05D005613 ORTHO05D006903 2.3e-61 239.2 156 73.7
SpUn0050_0040 Schrenkiella parvula HOM05D005613 ORTHO05D006903 2.3e-61 239.2 156 76.3
SpUn0508_0010 Schrenkiella parvula HOM05D005613 ORTHO05D006903 2.3e-61 239.2 156 76.3
A03p27830 Brassica napus HOM05D005613 ORTHO05D006903 3.0e-61 238.8 156 75.6
Peaxi162Scf00378g00519 Petunia axillaris HOM05D005613 ORTHO05D006903 3.0e-61 238.8 158 71.5
Sed0001462 Sechium edule HOM05D005613 ORTHO05D006903 6.7e-61 237.7 158 75.9
BcaB08g35134 Brassica carinata HOM05D005613 ORTHO05D006903 8.7e-61 237.3 156 74.4
SHI39270 Sapria himalayana HOM05D005613 ORTHO05D006903 1.1e-60 236.9 155 74.8
SHI42710 Sapria himalayana HOM05D005613 ORTHO05D006903 1.1e-60 236.9 155 74.8
unitig_27.g24986 Utricularia gibba HOM05D005613 ORTHO05D006903 1.5e-60 236.5 157 72.6
AUR62036512 Chenopodium quinoa HOM05D005613 ORTHO05D006903 1.9e-60 236.1 156 73.7
A09p55960 Brassica napus HOM05D005613 ORTHO05D006903 3.3e-60 235.3 156 73.1
BraA09t40998Z Brassica rapa HOM05D005613 ORTHO05D006903 3.3e-60 235.3 156 73.1
BolC8t51467H Brassica oleracea HOM05D005613 ORTHO05D006903 1.6e-59 233.0 156 71.8
Rhsim08G0188600 Rhododendron simsii HOM05D005613 ORTHO05D006903 2.2e-59 232.6 147 79.6
BcaC07g40897 Brassica carinata HOM05D005613 ORTHO05D006903 4.8e-59 231.5 156 71.2
C08p38940 Brassica napus HOM05D005613 ORTHO05D006903 4.8e-59 231.5 156 71.2
BcaB05g24059 Brassica carinata HOM05D005613 ORTHO05D006903 8.2e-59 230.7 153 75.2
DCAR_021614 Daucus carota HOM05D005613 ORTHO05D006903 1.1e-58 230.3 156 71.8
SEGI_09495 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 2.0e-57 226.1 155 71.0
unitig_699.g19129 Utricularia gibba HOM05D005613 ORTHO05D006903 5.0e-56 221.5 156 69.9
Sabra15G0115100 Salix brachista HOM05D005613 ORTHO05D006903 9.4e-55 217.2 175 65.1
SGA_v2.0_scaffold115G32075 Striga asiatica HOM05D005613 ORTHO05D006903 3.6e-54 215.3 151 69.5
ATR0680G053 Amborella trichopoda HOM05D005613 ORTHO05D006903 4.6e-54 214.9 153 68.6
Dinv04871 Davidia involucrata HOM05D005613 ORTHO05D006903 2.2e-48 196.1 164 63.4
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 2.5e-47 192.6 130 72.3
AagrBONN_evm.TU.Sc2ySwM_362.2466 Anthoceros agrestis HOM05D005613 ORTHO05D006903 4.4e-44 181.8 159 59.7
Aqoxy1G01617 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 1.4e-42 176.8 100 86.0
Cpa.g.sc13.142 Carica papaya HOM05D005613 ORTHO05D006903 9.1e-42 174.1 98 85.7
Mapoly0019s0004 Marchantia polymorpha HOM05D005613 ORTHO05D006903 1.0e-40 170.6 166 54.8
SMO180G0005 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 8.5e-40 167.5 158 53.2
Pp3c14_22450 Physcomitrium patens HOM05D005613 ORTHO05D006903 3.2e-39 165.6 159 56.6
CBR_g48821 Chara braunii HOM05D005613 ORTHO05D006903 1.2e-33 147.1 149 49.7
Cre16.g657300 Chlamydomonas reinhardtii HOM05D005613 ORTHO05D006903 1.7e-32 143.3 158 49.4
SGA_v2.0_scaffold42G16110 Striga asiatica HOM05D005613 ORTHO05D006903 1.6e-25 120.2 83 72.3
SMO353G0009 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 1.3e-19 100.5 156 42.9
MCO03G530 Micromonas commoda HOM05D005613 ORTHO05D006903 1.7e-19 100.1 103 49.5
SGA_v2.0_scaffold115G32072 Striga asiatica HOM05D000001 ORTHO05D000003 1.6e-17 93.6 98 52.0
PRCOL_00007276 Prasinoderma coloniale HOM05D005613 ORTHO05D006903 2.3e-16 89.7 167 37.7
AagrBONN_evm.TU.Sc2ySwM_117.1130 Anthoceros agrestis HOM05D005613 ORTHO05D006903 1.3e-11 73.9 68 55.9


User provided reference genes

Program Settings