Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_006139 Vanilla planifolia HOM05D005365 ORTHO05D006910 4.5e-134 481.5 281 100.0
MBI19_g22067_MAGBIO Magnolia biondii HOM05D005365 ORTHO05D006910 6.6e-53 211.8 279 53.8
Actinidia06487 Actinidia chinensis HOM05D005365 ORTHO05D006910 2.1e-51 206.8 285 46.7
Nn4g24353 Nelumbo nucifera HOM05D005365 ORTHO05D006910 1.2e-49 201.1 282 46.1
Aqoxy2G03929 Aquilegia oxysepala HOM05D005365 ORTHO05D006910 1.5e-49 200.7 280 48.9
TAR374G0610 Trochodendron aralioides HOM05D005365 ORTHO05D006910 5.8e-49 198.7 255 50.6
QL02p059099 Quercus lobata HOM05D005365 ORTHO05D006910 2.9e-48 196.4 282 48.6
CSS0031268 Camellia sinensis var. sinensis HOM05D005365 ORTHO05D006910 3.7e-48 196.1 283 46.3
CSS0046739 Camellia sinensis var. sinensis HOM05D005365 ORTHO05D006910 3.7e-48 196.1 283 46.3
Zm00001eb379890 Zea mays HOM05D005365 ORTHO05D006910 6.4e-48 195.3 282 45.7
Lj2C520T1 Lonicera japonica HOM05D005365 ORTHO05D006910 1.4e-47 194.1 284 43.3
Atru.chr1.1986 Acer truncatum HOM05D005365 ORTHO05D006910 7.0e-47 191.8 278 46.4
Cpa.g.sc116.71 Carica papaya HOM05D005365 ORTHO05D006910 9.2e-47 191.4 288 45.5
PSO478G2448 Papaver somniferum HOM05D005365 ORTHO05D006910 2.7e-46 189.9 270 48.1
GSVIVG01014028001 Vitis vinifera HOM05D005365 ORTHO05D006910 2.7e-46 189.9 273 47.6
FAN19G1822 Fragaria x ananassa HOM05D005365 ORTHO05D006910 7.8e-46 188.3 250 54.4
PSO017G3744 Papaver somniferum HOM05D005365 ORTHO05D006910 1.0e-45 188.0 271 48.3
Haze_14277 Corylus avellana HOM05D005365 ORTHO05D006910 1.3e-45 187.6 261 49.0
Potri.004G085500 Populus trichocarpa HOM05D005365 ORTHO05D006910 1.7e-45 187.2 279 47.0
Os06g0256000 Oryza sativa ssp. japonica HOM05D005365 ORTHO05D006910 3.0e-45 186.4 266 48.1
FAN26G1336 Fragaria x ananassa HOM05D005365 ORTHO05D006910 6.6e-45 185.3 250 48.4
Cfa007794 Carpinus fangiana HOM05D005365 ORTHO05D006910 8.6e-45 184.9 261 48.7
Glyma.18G041000 Glycine max HOM05D005365 ORTHO05D006910 1.5e-44 184.1 275 45.5
Lalb_Chr15g0084951 Lupinus albus HOM05D005365 ORTHO05D006910 1.5e-44 184.1 258 54.3
EL10Ac2g03189 Beta vulgaris HOM05D005365 ORTHO05D006910 2.5e-44 183.3 277 49.8
arahy.Tifrunner.gnm1.ann1.MH7SY7 Arachis hypogaea HOM05D005365 ORTHO05D006910 5.6e-44 182.2 257 50.6
arahy.Tifrunner.gnm1.ann1.WJY350 Arachis hypogaea HOM05D005365 ORTHO05D006910 7.3e-44 181.8 257 45.9
Sabra04G0056600 Salix brachista HOM05D005365 ORTHO05D006910 1.6e-43 180.6 280 49.3
MD09G1270700 Malus domestica HOM05D005365 ORTHO05D006910 2.1e-43 180.3 272 44.9
Aa31LG9G17470 Aethionema arabicum HOM05D005365 ORTHO05D006910 6.2e-43 178.7 279 46.2
Dinv19044 Davidia involucrata HOM05D005365 ORTHO05D006910 6.2e-43 178.7 278 44.6
vmacro07709 Vaccinium macrocarpon HOM05D005365 ORTHO05D006910 8.1e-43 178.3 267 50.6
TPR.G674 Trifolium pratense HOM05D005365 ORTHO05D006910 1.1e-42 177.9 252 50.0
Prupe.3G017700 Prunus persica HOM05D005365 ORTHO05D006910 1.4e-42 177.6 270 44.8
Eucgr.F02871 Eucalyptus grandis HOM05D005365 ORTHO05D006910 2.3e-42 176.8 278 46.0
Oeu012492.1 Olea europaea HOM05D005365 ORTHO05D006910 2.3e-42 176.8 271 43.5
Medtr3g065300 Medicago truncatula HOM05D005365 ORTHO05D006910 3.1e-42 176.4 282 44.7
ECA238G2923 Erigeron canadensis HOM05D005365 ORTHO05D006910 1.2e-41 174.5 281 45.6
PGR004G1341 Punica granatum HOM05D005365 ORTHO05D006910 1.2e-41 174.5 275 45.1
VMungo1383G2900 Vigna mungo HOM05D005365 ORTHO05D006910 1.2e-41 174.5 285 42.5
Ciclev10010965m.g Citrus clementina HOM05D005365 ORTHO05D006910 1.5e-41 174.1 262 43.9
Gorai.007G187500 Gossypium raimondii HOM05D005365 ORTHO05D006910 1.5e-41 174.1 287 42.5
Duzib133G0311 Durio zibethinus HOM05D005365 ORTHO05D006910 2.6e-41 173.3 280 43.2
Psat5g120520 Pisum sativum HOM05D005365 ORTHO05D006910 2.6e-41 173.3 254 52.0
MSTRG.15661 Avicennia marina HOM05D005365 ORTHO05D006910 3.4e-41 172.9 279 41.9
Ca_17092_v3 Cicer arietinum L. HOM05D005365 ORTHO05D006910 3.4e-41 172.9 280 43.6
Ca_17099_v3 Cicer arietinum L. HOM05D005365 ORTHO05D006910 3.4e-41 172.9 280 43.6
Glyma.11G215600 Glycine max HOM05D005365 ORTHO05D006910 3.4e-41 172.9 283 41.0
CiPaw.03G073200 Carya illinoinensis HOM05D005365 ORTHO05D006910 7.5e-41 171.8 272 46.3
AUR62018225 Chenopodium quinoa HOM05D005365 ORTHO05D006910 9.9e-41 171.4 276 42.4
MD17G1268900 Malus domestica HOM05D005365 ORTHO05D006910 9.9e-41 171.4 271 43.9
Phvul.001G229600 Phaseolus vulgaris HOM05D005365 ORTHO05D006910 1.3e-40 171.0 283 43.1
AUR62037789 Chenopodium quinoa HOM05D005365 ORTHO05D006910 1.7e-40 170.6 276 42.4
RcHm_v2.0_Chr3g0491161 Rosa chinensis HOM05D005365 ORTHO05D006910 2.2e-40 170.2 277 44.8
THA.LOC104805627 Tarenaya hassleriana HOM05D005365 ORTHO05D006910 3.7e-40 169.5 288 40.6
SGA_v2.0_scaffold45G17160 Striga asiatica HOM05D005365 ORTHO05D006910 6.4e-40 168.7 270 47.4
Lsat_1_v5_gn_2_68700 Lactuca sativa HOM05D005365 ORTHO05D006910 8.3e-40 168.3 276 47.5
Lj6g0003323 Lotus japonicus HOM05D005365 ORTHO05D006910 8.3e-40 168.3 200 49.0
Manes.03G027200 Manihot esculenta HOM05D005365 ORTHO05D006910 1.4e-39 167.5 260 48.8
Actinidia17204 Actinidia chinensis HOM05D005365 ORTHO05D006910 2.4e-39 166.8 200 50.5
Cc07_g13300 Coffea canephora HOM05D005365 ORTHO05D006910 4.1e-39 166.0 278 42.8
Peaxi162Scf00562g00038 Petunia axillaris HOM05D005365 ORTHO05D006910 4.1e-39 166.0 276 43.1
Migut.K00918 Erythranthe guttata HOM05D005365 ORTHO05D006910 7.1e-39 165.2 257 46.7
PGSC0003DMG400013306 Solanum tuberosum HOM05D005365 ORTHO05D006910 2.7e-38 163.3 251 46.2
TWI77G0914 Tripterygium wilfordii HOM05D005365 ORTHO05D006910 3.5e-38 162.9 198 49.0
CARHR215230 Cardamine hirsuta HOM05D005365 ORTHO05D006910 1.3e-37 161.0 279 40.9
Nitab4.5_0012785g0010 Nicotiana tabacum HOM05D005365 ORTHO05D006910 1.3e-37 161.0 250 43.6
COL.COLO4_13431 Corchorus olitorius HOM05D005365 ORTHO05D006910 1.7e-37 160.6 280 41.4
ATR0753G168 Amborella trichopoda HOM05D005365 ORTHO05D006910 3.9e-37 159.5 280 42.1
Hma1.2p1_1583F.1_g291990 Hydrangea macrophylla HOM05D005365 ORTHO05D006910 8.6e-37 158.3 199 48.2
Solyc11g011370.2 Solanum lycopersicum HOM05D005365 ORTHO05D006910 1.1e-36 157.9 250 47.2
Sopen11g006160 Solanum pennellii HOM05D005365 ORTHO05D006910 1.9e-36 157.1 250 47.2
MELO3C022831.2 Cucumis melo HOM05D005365 ORTHO05D006910 7.3e-36 155.2 263 43.0
CsaV3_5G023940 Cucumis sativus L. HOM05D005365 ORTHO05D006910 9.5e-36 154.8 263 43.3
SEGI_16018 Sequoiadendron giganteum HOM05D005365 ORTHO05D006910 9.5e-36 154.8 288 38.9
DCAR_028454 Daucus carota HOM05D005365 ORTHO05D006910 2.8e-35 153.3 278 41.0
CAN.G222.54 Capsicum annuum HOM05D005365 ORTHO05D006910 4.7e-35 152.5 249 45.4
ClCG03G008820 Citrullus lanatus HOM05D005365 ORTHO05D006910 4.7e-35 152.5 263 41.8
AL7G46400 Arabidopsis lyrata HOM05D005365 ORTHO05D006910 5.2e-34 149.1 280 40.7
Hund13093 Selenicereus undatus HOM05D005365 ORTHO05D006910 8.9e-34 148.3 271 42.1
Thecc.04G055200 Theobroma cacao HOM05D005365 ORTHO05D006910 1.2e-33 147.9 199 44.2
Thhalv10027629m.g Eutrema salsugineum HOM05D005365 ORTHO05D006910 5.8e-33 145.6 285 41.1
A04p10780 Brassica napus HOM05D005365 ORTHO05D006910 9.9e-33 144.8 279 40.5
BraA04t16742Z Brassica rapa HOM05D005365 ORTHO05D006910 9.9e-33 144.8 279 40.5
CANSAT80G2352 Cannabis sativa HOM05D005365 ORTHO05D006910 1.7e-32 144.1 279 41.2
Sp7g04480 Schrenkiella parvula HOM05D005365 ORTHO05D006910 2.9e-32 143.3 282 40.8
Gohir.D11G174900 Gossypium hirsutum HOM05D005365 ORTHO05D006910 9.2e-31 138.3 173 46.8
BcaB06g27110 Brassica carinata HOM05D005365 ORTHO05D006910 1.2e-30 137.9 271 41.3
Carub.0007s3279 Capsella rubella HOM05D005365 ORTHO05D006910 1.6e-30 137.5 283 38.5
AT5G37630 Arabidopsis thaliana HOM05D005365 ORTHO05D006910 2.7e-30 136.7 278 38.1
Nitab4.5_0000201g0010 Nicotiana tabacum HOM05D005365 ORTHO05D006910 7.8e-30 135.2 168 47.6
unitig_0.g2645 Utricularia gibba HOM05D005365 ORTHO05D006910 8.7e-29 131.7 193 41.5
Thhalv10027679m.g Eutrema salsugineum HOM05D005365 ORTHO05D006910 1.1e-28 131.3 278 37.4
BcaC02g09592 Brassica carinata HOM05D005365 ORTHO05D006910 5.6e-28 129.0 283 38.2
C04p44500 Brassica napus HOM05D005365 ORTHO05D006910 5.6e-28 129.0 283 38.2
BolC4t26020H Brassica oleracea HOM05D005365 ORTHO05D006910 5.6e-28 129.0 283 38.2
Pp3c22_14670 Physcomitrium patens HOM05D005365 ORTHO05D006910 7.8e-22 108.6 279 34.4
CAN.G691.4 Capsicum annuum HOM05D005365 ORTHO05D006910 1.9e-20 104.0 137 47.4
GSVIVG01038363001 Vitis vinifera HOM05D005365 ORTHO05D006910 6.4e-16 89.0 86 58.1
Mapoly0032s0119 Marchantia polymorpha HOM05D005365 ORTHO05D006910 1.0e-13 81.6 133 36.1
SGA_v2.0_scaffold45G17195 Striga asiatica HOM05D005365 ORTHO05D006910 1.8e-13 80.9 154 37.0
SMO367G0263 Selaginella moellendorffii HOM05D005365 ORTHO05D006910 2.3e-13 80.5 171 31.6
CDE05G1264 Ceratophyllum demersum HOM05D005365 ORTHO05D006910 3.7e-11 73.2 82 50.0
CBR_g39392 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-09 68.2 202 27.2


User provided reference genes

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