Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_006116 Vanilla planifolia HOM05D007633 ORTHO05D008817 2.4e-128 462.2 238 100.0
Nn1g02349 Nelumbo nucifera HOM05D007633 ORTHO05D008817 6.2e-36 155.2 243 42.0
TAR636G0739 Trochodendron aralioides HOM05D007633 ORTHO05D008817 2.4e-32 143.3 237 37.1
CSS0018565 Camellia sinensis var. sinensis HOM05D007633 ORTHO05D008817 1.1e-29 134.4 245 37.1
QL06p002095 Quercus lobata HOM05D007633 ORTHO05D008817 1.1e-29 134.4 163 42.9
Manes.03G177200 Manihot esculenta HOM05D007633 ORTHO05D008817 4.3e-29 132.5 244 36.1
Hma1.2p1_0745F.1_g212150 Hydrangea macrophylla HOM05D007633 ORTHO05D008817 7.3e-29 131.7 231 35.1
Haze_00885 Corylus avellana HOM05D007633 ORTHO05D008817 9.6e-29 131.3 269 34.6
Glyma.11G006100 Glycine max HOM05D007633 ORTHO05D008817 2.1e-28 130.2 264 34.5
ATR0697G107 Amborella trichopoda HOM05D007633 ORTHO05D008817 6.2e-28 128.6 227 37.0
GSVIVG01017995001 Vitis vinifera HOM05D007633 ORTHO05D008817 6.2e-28 128.6 239 37.7
PGSC0003DMG400032254 Solanum tuberosum HOM05D007633 ORTHO05D008817 2.4e-27 126.7 230 35.7
Atru.chr4.2449 Acer truncatum HOM05D007633 ORTHO05D008817 5.3e-27 125.6 265 32.8
CsaV3_3G013230 Cucumis sativus L. HOM05D007633 ORTHO05D008817 5.3e-27 125.6 259 35.1
MELO3C006526.2 Cucumis melo HOM05D007633 ORTHO05D008817 6.9e-27 125.2 252 35.3
Eucgr.H03451 Eucalyptus grandis HOM05D007633 ORTHO05D008817 9.0e-27 124.8 271 34.7
Sopen09g031040 Solanum pennellii HOM05D007633 ORTHO05D008817 1.2e-26 124.4 230 35.7
Thecc.04G233700 Theobroma cacao HOM05D007633 ORTHO05D008817 1.2e-26 124.4 250 36.8
Dinv14003 Davidia involucrata HOM05D007633 ORTHO05D008817 1.5e-26 124.0 216 37.5
Oeu011618.1 Olea europaea HOM05D007633 ORTHO05D008817 1.5e-26 124.0 219 33.3
HanXRQChr02g0035611 Helianthus annuus HOM05D007633 ORTHO05D008817 2.6e-26 123.2 224 35.3
Solyc09g082160.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 4.4e-26 122.5 230 35.2
PGR004G0463 Punica granatum HOM05D007633 ORTHO05D008817 5.8e-26 122.1 164 41.5
Cfa015662 Carpinus fangiana HOM05D007633 ORTHO05D008817 9.9e-26 121.3 269 33.1
Potri.008G154200 Populus trichocarpa HOM05D007633 ORTHO05D008817 1.3e-25 120.9 233 33.5
Ciclev10005651m.g Citrus clementina HOM05D007633 ORTHO05D008817 2.2e-25 120.2 257 31.9
Aqoxy2G03409 Aquilegia oxysepala HOM05D007633 ORTHO05D008817 6.4e-25 118.6 221 33.5
Actinidia36954 Actinidia chinensis HOM05D007633 ORTHO05D008817 8.4e-25 118.2 243 33.7
Gohir.A09G053600 Gossypium hirsutum HOM05D007633 ORTHO05D008817 1.1e-24 117.9 252 35.3
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 1.9e-24 117.1 256 31.6
Sed0010969 Sechium edule HOM05D007633 ORTHO05D008817 2.4e-24 116.7 235 33.2
Duzib212G0599 Durio zibethinus HOM05D007633 ORTHO05D008817 4.2e-24 115.9 173 41.0
Potri.010G086300 Populus trichocarpa HOM05D007633 ORTHO05D008817 4.2e-24 115.9 240 34.2
TWI73G0352 Tripterygium wilfordii HOM05D007633 ORTHO05D008817 5.4e-24 115.5 258 32.9
CANSAT78G1135 Cannabis sativa HOM05D007633 ORTHO05D008817 7.1e-24 115.2 261 31.0
Glyma.01G237200 Glycine max HOM05D007633 ORTHO05D008817 7.1e-24 115.2 253 33.6
Prupe.1G015500 Prunus persica HOM05D007633 ORTHO05D008817 7.1e-24 115.2 163 38.7
Psat4g209480 Pisum sativum HOM05D007633 ORTHO05D008817 9.3e-24 114.8 285 31.2
Rhsim02G0025900 Rhododendron simsii HOM05D007633 ORTHO05D008817 9.3e-24 114.8 229 31.9
TPR.G38043 Trifolium pratense HOM05D007633 ORTHO05D008817 1.2e-23 114.4 258 30.6
Medtr5g006410 Medicago truncatula HOM05D007633 ORTHO05D008817 1.6e-23 114.0 249 31.7
Cc03_g03920 Coffea canephora HOM05D007633 ORTHO05D008817 4.6e-23 112.5 247 30.4
Phvul.002G044600 Phaseolus vulgaris HOM05D007633 ORTHO05D008817 1.3e-22 110.9 259 33.6
Sabra10G0057400 Salix brachista HOM05D007633 ORTHO05D008817 1.3e-22 110.9 211 33.2
Lalb_Chr01g0013131 Lupinus albus HOM05D007633 ORTHO05D008817 1.7e-22 110.5 176 37.5
Ca_24403_v3 Cicer arietinum L. HOM05D007633 ORTHO05D008817 3.9e-22 109.4 233 33.5
LjContig00408g0001251 Lotus japonicus HOM05D007633 ORTHO05D008817 3.9e-22 109.4 165 38.8
MSTRG.21860 Avicennia marina HOM05D007633 ORTHO05D008817 5.1e-22 109.0 180 35.0
Gohir.D09G053050 Gossypium hirsutum HOM05D007633 ORTHO05D008817 1.1e-21 107.8 252 34.5
MD16G1195500 Malus domestica HOM05D007633 ORTHO05D008817 1.1e-21 107.8 245 30.2
Gorai.006G055000 Gossypium raimondii HOM05D007633 ORTHO05D008817 1.5e-21 107.5 258 34.1
FAN02G3335 Fragaria x ananassa HOM05D007633 ORTHO05D008817 2.5e-21 106.7 272 30.9
Nitab4.5_0001342g0010 Nicotiana tabacum HOM05D007633 ORTHO05D008817 5.6e-21 105.5 237 34.2
FvH4_4g16290 Fragaria vesca HOM05D007633 ORTHO05D008817 2.1e-20 103.6 173 34.7
FAN12G0707 Fragaria x ananassa HOM05D007633 ORTHO05D008817 2.1e-20 103.6 173 34.7
FAN22G0362 Fragaria x ananassa HOM05D007633 ORTHO05D008817 2.1e-20 103.6 272 30.9
Peaxi162Scf00192g01119 Petunia axillaris HOM05D007633 ORTHO05D008817 4.8e-20 102.4 238 33.2
PSO210G0191 Papaver somniferum HOM05D007633 ORTHO05D008817 1.8e-19 100.5 241 30.3
CiPaw.01G167500 Carya illinoinensis HOM05D007633 ORTHO05D008817 3.1e-19 99.8 251 30.3
Migut.N00191 Erythranthe guttata HOM05D007633 ORTHO05D008817 4.0e-19 99.4 180 36.1
Nitab4.5_0008118g0020 Nicotiana tabacum HOM05D007633 ORTHO05D008817 4.0e-19 99.4 244 30.7
CDE07G1037 Ceratophyllum demersum HOM05D007633 ORTHO05D008817 6.9e-19 98.6 167 36.5
SEGI_17234 Sequoiadendron giganteum HOM05D007633 ORTHO05D008817 9.0e-19 98.2 156 40.4
PSO761G0330 Papaver somniferum HOM05D007633 ORTHO05D008817 1.2e-18 97.8 230 29.1
RcHm_v2.0_Chr4g0415951 Rosa chinensis HOM05D007633 ORTHO05D008817 1.2e-18 97.8 262 29.8
ECA240G3784 Erigeron canadensis HOM05D000137 ORTHO05D000452 1.5e-18 97.4 213 31.5
Lsat_1_v5_gn_7_64401 Lactuca sativa HOM05D007633 ORTHO05D008817 1.5e-18 97.4 231 32.0
vmacro15349 Vaccinium macrocarpon HOM05D007633 ORTHO05D008817 1.7e-17 94.0 231 28.6
Peaxi162Scf00092g00615 Petunia axillaris HOM05D007633 ORTHO05D008817 2.9e-17 93.2 249 30.1
PSO210G6592 Papaver somniferum HOM05D007633 ORTHO05D008817 8.4e-17 91.7 240 28.3
Sopen06g019290 Solanum pennellii HOM05D007633 ORTHO05D008817 2.4e-16 90.1 154 36.4
ClCG05G005110 Citrullus lanatus HOM05D007633 ORTHO05D008817 4.2e-16 89.4 261 30.3
Hund12119 Selenicereus undatus HOM05D007633 ORTHO05D008817 7.1e-16 88.6 230 28.7
Ah.04g154590 Amaranthus hybridus HOM05D007633 ORTHO05D008817 1.6e-15 87.4 249 29.7
VMungo1215G1793 Vigna mungo HOM05D007633 ORTHO05D008817 1.6e-15 87.4 269 29.7
PSO761G0485 Papaver somniferum HOM05D007633 ORTHO05D008817 2.7e-15 86.7 241 27.8
AUR62034710 Chenopodium quinoa HOM05D007633 ORTHO05D008817 3.5e-15 86.3 153 35.9
AL1G15270 Arabidopsis lyrata HOM05D012198 ORTHO05D008817 1.8e-14 84.0 155 34.2
SalBow3G0862 Salvia bowleyana HOM05D007633 ORTHO05D008817 1.8e-14 84.0 252 31.0
Nitab4.5_0001920g0040 Nicotiana tabacum HOM05D007633 ORTHO05D008817 3.0e-14 83.2 189 29.6
Lsat_1_v5_gn_8_155361 Lactuca sativa HOM05D007633 ORTHO05D008817 6.7e-14 82.0 135 36.3
AT1G05430 Arabidopsis thaliana HOM05D012198 ORTHO05D008817 1.5e-13 80.9 171 34.5
THA.LOC104826165 Tarenaya hassleriana HOM05D012198 ORTHO05D008817 1.9e-13 80.5 247 28.3
Carub.0001s0476 Capsella rubella HOM05D012198 ORTHO05D008817 3.3e-13 79.7 258 27.9
Nitab4.5_0000321g0150 Nicotiana tabacum HOM05D007633 ORTHO05D008817 3.3e-13 79.7 250 29.6
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 3.7e-12 76.3 256 29.7
FAN07G1430 Fragaria x ananassa HOM05D007633 ORTHO05D008817 1.1e-11 74.7 204 31.4
CARHR205340 Cardamine hirsuta HOM05D012198 ORTHO05D008817 1.8e-11 73.9 160 31.9
Thhalv10008449m.g Eutrema salsugineum HOM05D012198 ORTHO05D008817 6.9e-11 72.0 263 28.1
BcaB02g06861 Brassica carinata HOM05D012198 ORTHO05D008817 9.0e-11 71.6 152 32.9
A10p04130 Brassica napus HOM05D012198 ORTHO05D008817 1.2e-10 71.2 152 32.2
BraA10t42683Z Brassica rapa HOM05D012198 ORTHO05D008817 1.2e-10 71.2 152 32.2
BcaC05g24387 Brassica carinata HOM05D012198 ORTHO05D008817 1.5e-10 70.9 159 31.4
C05p03770 Brassica napus HOM05D012198 ORTHO05D008817 2.0e-10 70.5 159 31.4
BolC5t29154H Brassica oleracea HOM05D012198 ORTHO05D008817 2.0e-10 70.5 159 31.4
Os10g0430800 Oryza sativa ssp. japonica HOM05D026697 ORTHO05D008817 2.0e-10 70.5 246 31.3
VMungo1215G1192 Vigna mungo HOM05D007633 ORTHO05D008817 3.4e-10 69.7 171 31.6
BcaC05g24389 Brassica carinata HOM05D012198 ORTHO05D008817 1.3e-09 67.8 143 32.2
arahy.Tifrunner.gnm1.ann1.VQRK5I Arachis hypogaea HOM05D007633 ORTHO05D008817 2.9e-09 66.6 160 31.2
Sp1g04300 Schrenkiella parvula HOM05D012198 ORTHO05D008817 4.9e-09 65.9 237 27.8
Os10g0430700 Oryza sativa ssp. japonica HOM05D026697 ORTHO05D008817 1.1e-08 64.7 237 27.0
arahy.Tifrunner.gnm1.ann1.5LNY8Z Arachis hypogaea HOM05D007633 ORTHO05D008817 4.2e-08 62.8 88 42.0
Zm00001eb222870 Zea mays HOM05D026697 ORTHO05D008817 1.0e-06 58.2 167 28.1
AUR62043551 Chenopodium quinoa HOM05D007633 ORTHO05D008817 5.1e-06 55.8 181 28.7


User provided reference genes

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