Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_006080 Vanilla planifolia HOM05D007242 ORTHO05D009089 2.5e-80 302.0 148 100.0
Sopen01g004000 Solanum pennellii HOM05D007242 ORTHO05D009089 1.2e-10 70.5 87 44.8
Solyc01g008480.4 Solanum lycopersicum HOM05D007242 ORTHO05D009089 2.1e-10 69.7 87 44.8
Lj2C896T5 Lonicera japonica HOM05D007242 ORTHO05D009089 8.1e-10 67.8 67 47.8
CiPaw.15G142800 Carya illinoinensis HOM05D007242 ORTHO05D009089 1.4e-09 67.0 78 47.4
TAR381G0682 Trochodendron aralioides HOM05D007242 ORTHO05D009089 2.4e-09 66.2 67 47.8
GSVIVG01019029001 Vitis vinifera HOM05D007242 ORTHO05D009089 2.4e-09 66.2 64 50.0
MBI16_g13145_MAGBIO Magnolia biondii HOM05D007242 ORTHO05D009089 3.1e-09 65.9 63 49.2
Cc07_g05120 Coffea canephora HOM05D007242 ORTHO05D009089 4.0e-09 65.5 67 47.8
Lj2A917T62 Lonicera japonica HOM05D007242 ORTHO05D009089 6.8e-09 64.7 67 46.3
CANSAT35G0651 Cannabis sativa HOM05D007242 ORTHO05D009089 2.0e-08 63.2 64 46.9
CSS0024550 Camellia sinensis var. sinensis HOM05D007242 ORTHO05D009089 2.6e-08 62.8 86 43.0
Aqoxy6G01016 Aquilegia oxysepala HOM05D007242 ORTHO05D009089 3.4e-08 62.4 79 40.5
A06p44470 Brassica napus HOM05D007242 ORTHO05D009089 4.4e-08 62.0 90 36.7
BraA06t27320Z Brassica rapa HOM05D007242 ORTHO05D009089 4.4e-08 62.0 90 36.7
Nn1g05103 Nelumbo nucifera HOM05D007242 ORTHO05D009089 4.4e-08 62.0 64 46.9
Nitab4.5_0010783g0030 Nicotiana tabacum HOM05D007242 ORTHO05D009089 4.4e-08 62.0 100 39.0
Rhsim08G0035000 Rhododendron simsii HOM05D007242 ORTHO05D009089 4.4e-08 62.0 64 46.9
CDE07G1297 Ceratophyllum demersum HOM05D007242 ORTHO05D009089 5.8e-08 61.6 104 34.6
Haze_18840 Corylus avellana HOM05D007242 ORTHO05D009089 5.8e-08 61.6 81 43.2
HanXRQChr14g0431951 Helianthus annuus HOM05D007242 ORTHO05D009089 9.9e-08 60.8 71 42.3
BcaC06g31314 Brassica carinata HOM05D007242 ORTHO05D009089 1.3e-07 60.5 80 38.8
CAN.G1204.3 Capsicum annuum HOM05D007242 ORTHO05D009089 1.3e-07 60.5 84 40.5
Peaxi162Scf00075g00618 Petunia axillaris HOM05D007242 ORTHO05D009089 1.3e-07 60.5 95 37.9
ClCG02G013250 Citrullus lanatus HOM05D007242 ORTHO05D009089 2.9e-07 59.3 67 41.8
PGR102G1679 Punica granatum HOM05D007242 ORTHO05D009089 2.9e-07 59.3 68 41.2
COL.COLO4_22144 Corchorus olitorius HOM05D007242 ORTHO05D009089 3.8e-07 58.9 67 43.3
Hma1.2p1_0939F.1_g239400 Hydrangea macrophylla HOM05D007242 ORTHO05D009089 3.8e-07 58.9 67 38.8
Psat4g001600 Pisum sativum HOM05D007242 ORTHO05D009089 3.8e-07 58.9 81 42.0
TPR.G15492 Trifolium pratense HOM05D007242 ORTHO05D009089 4.9e-07 58.5 72 41.7
vmacro23494 Vaccinium macrocarpon HOM05D007242 ORTHO05D009089 4.9e-07 58.5 64 43.8
Hma1.2p1_0268F.1_g107710 Hydrangea macrophylla HOM05D007242 ORTHO05D009089 6.4e-07 58.2 67 40.3
Lsat_1_v5_gn_2_38041 Lactuca sativa HOM05D007242 ORTHO05D009089 6.4e-07 58.2 80 35.0
AT2G01390 Arabidopsis thaliana HOM05D007242 ORTHO05D009089 8.4e-07 57.8 82 37.8
arahy.Tifrunner.gnm1.ann1.YZC3AP Arachis hypogaea HOM05D007242 ORTHO05D009089 8.4e-07 57.8 67 43.3
MD15G1269300 Malus domestica HOM05D007242 ORTHO05D009089 8.4e-07 57.8 90 36.7
Peaxi162Scf00075g00617 Petunia axillaris HOM05D007242 ORTHO05D009089 8.4e-07 57.8 75 41.3
TWI53G0783 Tripterygium wilfordii HOM05D007242 ORTHO05D009089 8.4e-07 57.8 64 42.2
Duzib264G0124 Durio zibethinus HOM05D007242 ORTHO05D009089 1.1e-06 57.4 64 42.2
Atru.chr3.510 Acer truncatum HOM05D007242 ORTHO05D009089 1.4e-06 57.0 86 38.4
Gohir.A11G044400 Gossypium hirsutum HOM05D007242 ORTHO05D009089 1.4e-06 57.0 48 50.0
Gohir.D11G047900 Gossypium hirsutum HOM05D007242 ORTHO05D009089 1.4e-06 57.0 48 50.0
Gorai.007G051500 Gossypium raimondii HOM05D007242 ORTHO05D009089 1.4e-06 57.0 48 50.0
Potri.005G127500 Populus trichocarpa HOM05D007242 ORTHO05D009089 1.4e-06 57.0 102 31.4
Prupe.7G148400 Prunus persica HOM05D007242 ORTHO05D009089 1.4e-06 57.0 78 39.7
Medtr8g107230 Medicago truncatula HOM05D007242 ORTHO05D009089 1.9e-06 56.6 82 40.2
SGA_v2.0_scaffold204G41644 Striga asiatica HOM05D007242 ORTHO05D009089 2.4e-06 56.2 78 39.7
Eucgr.B03084 Eucalyptus grandis HOM05D007242 ORTHO05D009089 3.2e-06 55.8 63 42.9
Thhalv10000833m.g Eutrema salsugineum HOM05D007242 ORTHO05D009089 3.2e-06 55.8 90 35.6
Sabra05G0104300 Salix brachista HOM05D007242 ORTHO05D009089 3.2e-06 55.8 100 33.0
arahy.Tifrunner.gnm1.ann1.79NCEV Arachis hypogaea HOM05D007242 ORTHO05D009089 5.4e-06 55.1 67 41.8
MELO3C020940.2 Cucumis melo HOM05D007242 ORTHO05D009089 5.4e-06 55.1 67 40.3
QL12p024714 Quercus lobata HOM05D007242 ORTHO05D009089 9.2e-06 54.3 64 45.3
Sp2g12820 Schrenkiella parvula HOM05D007242 ORTHO05D009089 9.2e-06 54.3 90 34.4
VMungo0251G2211 Vigna mungo HOM05D007242 ORTHO05D009089 9.2e-06 54.3 67 40.3


User provided reference genes

Program Settings