Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_006079 Vanilla planifolia HOM05D007242 ORTHO05D009089 1.4e-125 453.0 239 100.0
Lj2C896T5 Lonicera japonica HOM05D007242 ORTHO05D009089 1.4e-51 207.2 220 47.3
Lj2A917T62 Lonicera japonica HOM05D007242 ORTHO05D009089 3.1e-51 206.1 220 47.3
Sabra05G0104300 Salix brachista HOM05D007242 ORTHO05D009089 1.5e-50 203.8 218 47.2
GSVIVG01019029001 Vitis vinifera HOM05D007242 ORTHO05D009089 9.9e-50 201.1 237 46.0
Atru.chr3.510 Acer truncatum HOM05D007242 ORTHO05D009089 5.1e-46 188.7 260 40.0
CAN.G1204.3 Capsicum annuum HOM05D007242 ORTHO05D009089 5.1e-46 188.7 220 42.3
Ciclev10027297m.g Citrus clementina HOM05D007242 ORTHO05D009089 3.3e-45 186.0 228 43.0
Nitab4.5_0008184g0020 Nicotiana tabacum HOM05D007242 ORTHO05D009089 1.5e-42 177.2 220 41.8
MBI16_g13145_MAGBIO Magnolia biondii HOM05D007242 ORTHO05D009089 9.9e-42 174.5 164 51.8
QL12p024714 Quercus lobata HOM05D007242 ORTHO05D009089 2.2e-41 173.3 183 50.3
Nn1g05103 Nelumbo nucifera HOM05D007242 ORTHO05D009089 2.9e-41 172.9 168 53.0
TAR381G0682 Trochodendron aralioides HOM05D007242 ORTHO05D009089 3.8e-41 172.6 173 50.3
Aqoxy6G01016 Aquilegia oxysepala HOM05D007242 ORTHO05D009089 1.1e-40 171.0 190 47.4
Glyma.05G246000 Glycine max HOM05D007242 ORTHO05D009089 1.1e-40 171.0 201 43.3
Haze_18840 Corylus avellana HOM05D007242 ORTHO05D009089 3.2e-40 169.5 184 48.4
Dinv26797 Davidia involucrata HOM05D007242 ORTHO05D009089 1.6e-39 167.2 179 46.4
Medtr8g107230 Medicago truncatula HOM05D007242 ORTHO05D009089 1.6e-39 167.2 198 43.9
Psat4g001600 Pisum sativum HOM05D007242 ORTHO05D009089 2.7e-39 166.4 198 42.9
TPR.G15492 Trifolium pratense HOM05D007242 ORTHO05D009089 2.7e-39 166.4 198 44.4
VMungo0251G2211 Vigna mungo HOM05D007242 ORTHO05D009089 4.6e-39 165.6 195 42.1
A06p37220 Brassica napus HOM05D007242 ORTHO05D009089 1.7e-38 163.7 226 42.5
CSS0024550 Camellia sinensis var. sinensis HOM05D007242 ORTHO05D009089 3.9e-38 162.5 189 45.0
arahy.Tifrunner.gnm1.ann1.YZC3AP Arachis hypogaea HOM05D007242 ORTHO05D009089 6.6e-38 161.8 198 43.9
CARHR143900 Cardamine hirsuta HOM05D007242 ORTHO05D009089 6.6e-38 161.8 209 44.5
MD15G1269300 Malus domestica HOM05D007242 ORTHO05D009089 1.5e-37 160.6 196 44.4
Oeu038867.1 Olea europaea HOM05D007242 ORTHO05D009089 1.5e-37 160.6 199 43.7
Duzib264G0124 Durio zibethinus HOM05D007242 ORTHO05D009089 1.9e-37 160.2 180 46.7
Potri.005G127500 Populus trichocarpa HOM05D007242 ORTHO05D009089 5.6e-37 158.7 188 42.0
CiPaw.15G142800 Carya illinoinensis HOM05D007242 ORTHO05D009089 7.3e-37 158.3 179 49.2
COL.COLO4_04840 Corchorus olitorius HOM05D007242 ORTHO05D009089 4.0e-35 152.5 232 39.2
Rhsim08G0035000 Rhododendron simsii HOM05D007242 ORTHO05D009089 4.0e-35 152.5 186 44.1
AUR62003202 Chenopodium quinoa HOM05D007242 ORTHO05D009089 5.3e-35 152.1 207 39.1
arahy.Tifrunner.gnm1.ann1.79NCEV Arachis hypogaea HOM05D007242 ORTHO05D009089 6.9e-35 151.8 189 42.9
Hma1.2p1_0268F.1_g107710 Hydrangea macrophylla HOM05D007242 ORTHO05D009089 6.9e-35 151.8 180 43.9
THA.LOC104819810 Tarenaya hassleriana HOM05D007242 ORTHO05D009089 1.2e-34 151.0 190 41.6
Gorai.007G051500 Gossypium raimondii HOM05D007242 ORTHO05D009089 2.6e-34 149.8 174 45.4
Hma1.2p1_0939F.1_g239400 Hydrangea macrophylla HOM05D007242 ORTHO05D009089 4.5e-34 149.1 186 42.5
Os10g0358700 Oryza sativa ssp. japonica HOM05D007242 ORTHO05D009089 4.5e-34 149.1 171 48.5
Prupe.7G148400 Prunus persica HOM05D007242 ORTHO05D009089 5.8e-34 148.7 185 43.8
A06p44470 Brassica napus HOM05D007242 ORTHO05D009089 7.6e-34 148.3 198 42.4
BraA06t27320Z Brassica rapa HOM05D007242 ORTHO05D009089 7.6e-34 148.3 198 42.4
Lalb_Chr05g0221691 Lupinus albus HOM05D007242 ORTHO05D009089 1.7e-33 147.1 189 39.2
Phvul.002G329700 Phaseolus vulgaris HOM05D007242 ORTHO05D009089 1.7e-33 147.1 188 42.0
BraA06t26646Z Brassica rapa HOM05D007242 ORTHO05D009089 2.9e-33 146.4 226 40.3
Thecc.01G042000 Theobroma cacao HOM05D007242 ORTHO05D009089 2.9e-33 146.4 176 46.6
Gohir.A11G044400 Gossypium hirsutum HOM05D007242 ORTHO05D009089 4.9e-33 145.6 174 44.8
SalBow1G2223 Salvia bowleyana HOM05D007242 ORTHO05D009089 4.9e-33 145.6 179 43.0
ATR0767G228 Amborella trichopoda HOM05D007242 ORTHO05D009089 2.4e-32 143.3 181 43.1
Thhalv10000833m.g Eutrema salsugineum HOM05D007242 ORTHO05D009089 2.4e-32 143.3 200 41.5
Manes.13G136000 Manihot esculenta HOM05D007242 ORTHO05D009089 2.4e-32 143.3 182 41.8
BcaC06g34194 Brassica carinata HOM05D007242 ORTHO05D009089 3.2e-32 142.9 206 42.2
Eucgr.B03084 Eucalyptus grandis HOM05D007242 ORTHO05D009089 4.2e-32 142.5 191 41.4
HanXRQChr07g0193491 Helianthus annuus HOM05D007242 ORTHO05D009089 4.2e-32 142.5 215 37.7
Peaxi162Scf00075g00618 Petunia axillaris HOM05D007242 ORTHO05D009089 5.4e-32 142.1 189 40.2
C07p31760 Brassica napus HOM05D007242 ORTHO05D009089 1.2e-31 141.0 204 42.2
BolC7t43717H Brassica oleracea HOM05D007242 ORTHO05D009089 1.2e-31 141.0 204 42.2
Sp2g12820 Schrenkiella parvula HOM05D007242 ORTHO05D009089 2.7e-31 139.8 200 41.5
Carub.0005s0035 Capsella rubella HOM05D007242 ORTHO05D009089 3.5e-31 139.4 202 41.6
AT2G01390 Arabidopsis thaliana HOM05D007242 ORTHO05D009089 7.9e-31 138.3 194 41.8
BcaC06g31314 Brassica carinata HOM05D007242 ORTHO05D009089 7.9e-31 138.3 202 40.6
MSTRG.2935 Avicennia marina HOM05D007242 ORTHO05D009089 1.0e-30 137.9 179 40.2
SGA_v2.0_scaffold204G41644 Striga asiatica HOM05D007242 ORTHO05D009089 1.8e-30 137.1 187 36.4
CANSAT35G0651 Cannabis sativa HOM05D007242 ORTHO05D009089 2.3e-30 136.7 182 41.2
MD02G1154900 Malus domestica HOM05D007242 ORTHO05D009089 6.7e-30 135.2 215 36.3
PGR102G1679 Punica granatum HOM05D007242 ORTHO05D009089 6.7e-30 135.2 188 41.0
MELO3C020940.2 Cucumis melo HOM05D007242 ORTHO05D009089 1.9e-29 133.7 193 36.3
ClCG02G013250 Citrullus lanatus HOM05D007242 ORTHO05D009089 3.3e-29 132.9 193 36.8
Aa31LG2G8550 Aethionema arabicum HOM05D007242 ORTHO05D009089 5.6e-29 132.1 199 40.2
AL5G10350 Arabidopsis lyrata HOM05D007242 ORTHO05D009089 1.3e-28 131.0 206 37.9
CsaV3_2G017430 Cucumis sativus L. HOM05D007242 ORTHO05D009089 4.8e-28 129.0 191 35.6
Migut.H00525 Erythranthe guttata HOM05D007242 ORTHO05D009089 1.4e-27 127.5 180 39.4
Sopen01g004000 Solanum pennellii HOM05D007242 ORTHO05D009089 1.4e-27 127.5 175 37.7
Zm00001eb288630 Zea mays HOM05D007242 ORTHO05D009089 2.4e-27 126.7 168 39.9
HanXRQChr14g0431951 Helianthus annuus HOM05D007242 ORTHO05D009089 5.3e-27 125.6 172 39.0
TWI53G0783 Tripterygium wilfordii HOM05D007242 ORTHO05D009089 6.9e-27 125.2 168 42.9
vmacro23494 Vaccinium macrocarpon HOM05D007242 ORTHO05D009089 9.0e-27 124.8 178 39.9
Sed0022143 Sechium edule HOM05D007242 ORTHO05D009089 1.2e-26 124.4 189 34.9
Solyc01g008480.4 Solanum lycopersicum HOM05D007242 ORTHO05D009089 1.2e-26 124.4 175 37.7
Peaxi162Scf00075g00617 Petunia axillaris HOM05D007242 ORTHO05D009089 3.4e-26 122.9 177 37.9
Hund14133 Selenicereus undatus HOM05D007242 ORTHO05D009089 3.4e-26 122.9 180 36.7
Cc07_g05120 Coffea canephora HOM05D007242 ORTHO05D009089 3.8e-25 119.4 171 39.2
Nitab4.5_0010783g0030 Nicotiana tabacum HOM05D007242 ORTHO05D009089 3.8e-25 119.4 176 38.1
EL10Ac6g14891 Beta vulgaris HOM05D007242 ORTHO05D009089 6.4e-25 118.6 155 38.1
DCAR_026265 Daucus carota HOM05D007242 ORTHO05D009089 1.1e-24 117.9 174 37.4
AUR62008019 Chenopodium quinoa HOM05D007242 ORTHO05D009089 9.3e-24 114.8 175 36.6
vmacro22084 Vaccinium macrocarpon HOM05D007242 ORTHO05D009089 1.3e-22 110.9 197 34.5
Gohir.D11G047900 Gossypium hirsutum HOM05D007242 ORTHO05D009089 3.0e-22 109.8 141 43.3
ECA246G4655 Erigeron canadensis HOM05D007242 ORTHO05D009089 5.6e-21 105.5 168 35.1
Glyma.08G053933 Glycine max HOM05D007242 ORTHO05D009089 4.8e-20 102.4 111 43.2
Atru.chr3.508 Acer truncatum HOM05D007242 ORTHO05D009089 8.2e-20 101.7 100 51.0
Atru.chr3.509 Acer truncatum HOM05D007242 ORTHO05D009089 2.2e-17 93.6 78 57.7
EL10Ac4g08697 Beta vulgaris HOM05D007242 ORTHO05D009089 4.9e-17 92.4 140 35.7
Lsat_1_v5_gn_2_38041 Lactuca sativa HOM05D007242 ORTHO05D009089 6.0e-15 85.5 147 33.3
CDE07G1297 Ceratophyllum demersum HOM05D007242 ORTHO05D009089 6.1e-07 58.9 37 75.7
CSS0006147 Camellia sinensis var. sinensis HOM05D007242 ORTHO05D009089 7.9e-07 58.5 169 26.0


User provided reference genes

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