Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005969 Vanilla planifolia HOM05D006593 ORTHO05D008512 7.4e-237 823.5 438 100.0
HPP92_005976 Vanilla planifolia HOM05D006593 ORTHO05D008512 6.3e-236 820.5 438 99.8
Manes.13G098700 Manihot esculenta HOM05D006593 ORTHO05D008512 2.3e-84 317.0 350 52.0
Dinv01622 Davidia involucrata HOM05D006593 ORTHO05D008512 2.8e-82 310.1 350 52.0
PSO017G0451 Papaver somniferum HOM05D006593 ORTHO05D008512 4.7e-82 309.3 358 52.2
QL06p035616 Quercus lobata HOM05D006593 ORTHO05D008512 4.0e-81 306.2 363 51.0
Os02g0781600 Oryza sativa ssp. japonica HOM05D006593 ORTHO05D008512 4.4e-80 302.8 383 48.0
TAR628G0061 Trochodendron aralioides HOM05D006593 ORTHO05D008512 4.4e-80 302.8 364 49.7
Haze_03860 Corylus avellana HOM05D006593 ORTHO05D008512 1.3e-79 301.2 349 52.4
Thecc.01G091500 Theobroma cacao HOM05D006593 ORTHO05D008512 2.2e-79 300.4 348 50.0
Duzib147G0804 Durio zibethinus HOM05D006593 ORTHO05D008512 6.4e-79 298.9 354 50.0
PSO170G1479 Papaver somniferum HOM05D006593 ORTHO05D008512 1.1e-78 298.1 358 51.1
Ciclev10003755m.g Citrus clementina HOM05D006593 ORTHO05D008512 1.4e-78 297.7 348 49.1
Nn5g29896 Nelumbo nucifera HOM05D006593 ORTHO05D008512 3.2e-78 296.6 374 47.3
CiPaw.07G048200 Carya illinoinensis HOM05D006593 ORTHO05D008512 7.1e-78 295.4 350 50.0
FAN28G2735 Fragaria x ananassa HOM05D006593 ORTHO05D008512 1.6e-77 294.3 346 50.0
Gohir.A02G131300 Gossypium hirsutum HOM05D006593 ORTHO05D008512 2.7e-77 293.5 348 48.0
Glyma.01G023700 Glycine max HOM05D006593 ORTHO05D008512 6.0e-77 292.4 363 46.6
TWI53G0534 Tripterygium wilfordii HOM05D006593 ORTHO05D008512 6.0e-77 292.4 347 49.9
RcHm_v2.0_Chr2g0111321 Rosa chinensis HOM05D006593 ORTHO05D008512 7.8e-77 292.0 345 49.3
COL.COLO4_27348 Corchorus olitorius HOM05D006593 ORTHO05D008512 1.3e-76 291.2 350 48.9
MD15G1313700 Malus domestica HOM05D006593 ORTHO05D008512 3.0e-76 290.0 372 48.7
Gohir.D03G042700 Gossypium hirsutum HOM05D006593 ORTHO05D008512 5.1e-76 289.3 348 47.4
Gorai.003G043400 Gossypium raimondii HOM05D006593 ORTHO05D008512 5.1e-76 289.3 348 47.4
Atru.chr3.1259 Acer truncatum HOM05D006593 ORTHO05D008512 6.6e-76 288.9 347 47.6
arahy.Tifrunner.gnm1.ann1.67PG0W Arachis hypogaea HOM05D006593 ORTHO05D008512 6.6e-76 288.9 351 48.4
arahy.Tifrunner.gnm1.ann1.ZAKH7Z Arachis hypogaea HOM05D006593 ORTHO05D008512 6.6e-76 288.9 351 48.4
FAN19G1905 Fragaria x ananassa HOM05D006593 ORTHO05D008512 6.6e-76 288.9 350 49.1
Sc16g0000540 Simmondsia chinensis HOM05D006593 ORTHO05D004993 8.6e-76 288.5 349 48.7
Aqoxy5G01304_Aqoxy5G01305 Aquilegia oxysepala HOM05D006593 ORTHO05D008512 2.5e-75 287.0 352 48.6
FAN26G1425 Fragaria x ananassa HOM05D006593 ORTHO05D008512 7.3e-75 285.4 350 49.1
TPR.G29973 Trifolium pratense HOM05D006593 ORTHO05D008512 9.5e-75 285.0 347 47.6
Lj2g0020402 Lotus japonicus HOM05D006593 ORTHO05D008512 1.2e-74 284.6 350 48.3
Actinidia06518 Actinidia chinensis HOM05D006593 ORTHO05D008512 2.1e-74 283.9 353 47.3
Medtr5g032210 Medicago truncatula HOM05D006593 ORTHO05D008512 2.8e-74 283.5 351 47.9
CSS0021282 Camellia sinensis var. sinensis HOM05D006593 ORTHO05D008512 1.1e-73 281.6 349 47.3
CsaV3_6G045050 Cucumis sativus L. HOM05D006593 ORTHO05D008512 1.4e-73 281.2 347 47.8
Sabra07G0008000 Salix brachista HOM05D006593 ORTHO05D008512 6.8e-73 278.9 371 47.4
Sed0000560 Sechium edule HOM05D006593 ORTHO05D008512 8.9e-73 278.5 347 48.1
Potri.007G010600 Populus trichocarpa HOM05D006593 ORTHO05D008512 1.5e-72 277.7 349 48.7
Lju188A1G72 Lonicera japonica HOM05D006593 ORTHO05D008512 2.0e-72 277.3 349 48.4
PGSC0003DMG400016138 Solanum tuberosum HOM05D006593 ORTHO05D008512 5.8e-72 275.8 367 44.7
Zm00001eb257050 Zea mays HOM05D006593 ORTHO05D008512 5.8e-72 275.8 345 45.8
Cpa.g.sc55.33 Carica papaya HOM05D006593 ORTHO05D008512 7.6e-72 275.4 343 48.7
Rhsim10G0172300 Rhododendron simsii HOM05D006593 ORTHO05D008512 9.9e-72 275.0 352 44.9
DCAR_014189 Daucus carota HOM05D006593 ORTHO05D008512 1.3e-71 274.6 347 45.8
Sopen11g005350 Solanum pennellii HOM05D006593 ORTHO05D008512 3.2e-70 270.0 367 44.4
Solyc11g010550.2 Solanum lycopersicum HOM05D006593 ORTHO05D008512 4.1e-70 269.6 367 44.1
PGR031G1437 Punica granatum HOM05D006593 ORTHO05D008512 1.0e-68 265.0 354 47.5
Peaxi162Scf00778g00014 Petunia axillaris HOM05D006593 ORTHO05D008512 1.7e-68 264.2 348 44.8
Cc07_g14190 Coffea canephora HOM05D006593 ORTHO05D008512 2.3e-68 263.8 347 47.0
Oeu012466.1 Olea europaea HOM05D006593 ORTHO05D008512 8.6e-68 261.9 354 45.5
Eucgr.I00552 Eucalyptus grandis HOM05D006593 ORTHO05D008512 1.9e-67 260.8 351 45.0
Hund16537 Selenicereus undatus HOM05D006593 ORTHO05D008512 1.9e-67 260.8 354 46.3
Nitab4.5_0001468g0100 Nicotiana tabacum HOM05D006593 ORTHO05D008512 2.5e-67 260.4 369 43.4
ECA246G1560 Erigeron canadensis HOM05D006593 ORTHO05D004993 5.6e-67 259.2 358 42.7
Nitab4.5_0004153g0020 Nicotiana tabacum HOM05D006593 ORTHO05D008512 5.6e-67 259.2 369 43.4
SGA_v2.0_scaffold45G17238 Striga asiatica HOM05D006593 ORTHO05D008512 7.3e-67 258.8 368 45.4
CANSAT01G0713 Cannabis sativa HOM05D006593 ORTHO05D008512 1.2e-66 258.1 355 45.1
ATR0665G270 Amborella trichopoda HOM05D006593 ORTHO05D008512 4.7e-66 256.1 346 46.8
Eucgr.I00472 Eucalyptus grandis HOM05D006593 ORTHO05D008512 6.2e-66 255.8 351 44.7
Ah.02g123650 Amaranthus hybridus HOM05D006593 ORTHO05D008512 8.1e-66 255.4 372 44.4
EL10Ac6g15212 Beta vulgaris HOM05D006593 ORTHO05D008512 1.1e-65 255.0 351 44.4
AL4G12066 Arabidopsis lyrata HOM05D006593 ORTHO05D008512 3.4e-64 250.0 349 46.1
Carub.0004s0170 Capsella rubella HOM05D006593 ORTHO05D008512 7.6e-64 248.8 355 45.9
AUR62003656 Chenopodium quinoa HOM05D006593 ORTHO05D008512 7.6e-64 248.8 347 43.8
Thhalv10000032m.g Eutrema salsugineum HOM05D006593 ORTHO05D008512 7.6e-64 248.8 351 46.4
A09p57440 Brassica napus HOM05D006593 ORTHO05D008512 1.7e-63 247.7 350 46.6
BraA09t41136Z Brassica rapa HOM05D006593 ORTHO05D008512 1.7e-63 247.7 350 46.6
vmacro13002 Vaccinium macrocarpon HOM05D006593 ORTHO05D008512 3.8e-63 246.5 431 38.3
BcaC07g41050 Brassica carinata HOM05D006593 ORTHO05D008512 4.9e-63 246.1 351 47.6
C08p40530 Brassica napus HOM05D006593 ORTHO05D008512 4.9e-63 246.1 351 47.6
AUR62017964 Chenopodium quinoa HOM05D006593 ORTHO05D008512 4.9e-63 246.1 347 43.5
Migut.K00792 Erythranthe guttata HOM05D006593 ORTHO05D008512 6.4e-63 245.7 345 45.8
THA.LOC104824911 Tarenaya hassleriana HOM05D006593 ORTHO05D008512 6.4e-63 245.7 347 45.0
BcaB08g35096 Brassica carinata HOM05D006593 ORTHO05D008512 1.1e-62 245.0 346 46.8
BolC8t51623H Brassica oleracea HOM05D006593 ORTHO05D008512 2.4e-62 243.8 347 47.0
HanXRQChr17g0550591 Helianthus annuus HOM05D006593 ORTHO05D008512 2.7e-61 240.4 341 44.3
AT2G22530 Arabidopsis thaliana HOM05D006593 ORTHO05D008512 3.5e-61 240.0 349 44.7
Sp4g01570 Schrenkiella parvula HOM05D006593 ORTHO05D008512 3.0e-60 236.9 351 44.4
CAN.G1843.3 Capsicum annuum HOM05D006593 ORTHO05D008512 6.6e-60 235.7 325 44.6
Prupe.6G198700 Prunus persica HOM05D006593 ORTHO05D008512 1.6e-58 231.1 349 43.3
SEGI_04856 Sequoiadendron giganteum HOM05D006593 ORTHO05D008512 1.4e-57 228.0 373 40.2
SEGI_21075 Sequoiadendron giganteum HOM05D006593 ORTHO05D008512 1.4e-57 228.0 373 40.2
SalBow5G0109 Salvia bowleyana HOM05D006593 ORTHO05D008512 1.8e-57 227.6 390 38.7
unitig_748.g8644 Utricularia gibba HOM05D006593 ORTHO05D008512 4.9e-55 219.5 346 43.1
Lsat_1_v5_gn_3_61401 Lactuca sativa HOM05D006593 ORTHO05D008512 1.9e-54 217.6 338 43.8
FvH4_1g19740 Fragaria vesca HOM05D006593 ORTHO05D008512 9.3e-54 215.3 255 47.8
Cfa006891 Carpinus fangiana HOM05D006593 ORTHO05D008512 1.5e-51 208.0 252 49.6
Phvul.002G147900 Phaseolus vulgaris HOM05D006593 ORTHO05D008512 1.9e-51 207.6 254 45.3
Psat2g085480 Pisum sativum HOM05D006593 ORTHO05D008512 2.8e-50 203.8 372 37.1
Eucgr.I00548 Eucalyptus grandis HOM05D006593 ORTHO05D008512 4.0e-49 199.9 351 37.6
Ca_04534_v3 Cicer arietinum L. HOM05D006593 ORTHO05D008512 2.4e-46 190.7 324 42.3
Pp3c8_800 Physcomitrium patens HOM05D006593 ORTHO05D008512 8.7e-44 182.2 346 36.1
VMungo1215G1341 Vigna mungo HOM05D006593 ORTHO05D008512 8.7e-44 182.2 237 43.5
Mapoly0005s0227 Marchantia polymorpha HOM05D006593 ORTHO05D008512 4.3e-43 179.9 361 37.4
Lalb_Chr05g0216291 Lupinus albus HOM05D006593 ORTHO05D008512 2.5e-38 164.1 224 42.0
MELO3C007718.2 Cucumis melo HOM05D006593 ORTHO05D008512 8.7e-36 155.6 262 41.2
MBI06_g07364_MAGBIO Magnolia biondii HOM05D006593 ORTHO05D008512 3.8e-31 140.2 138 56.5
CAN.G1724.3 Capsicum annuum HOM05D006593 ORTHO05D008512 1.9e-30 137.9 145 55.2
CARHR113720 Cardamine hirsuta HOM05D006593 ORTHO05D008512 1.6e-29 134.8 132 60.6
Lalb_Chr05g0216281 Lupinus albus HOM05D006593 ORTHO05D008512 4.3e-27 126.7 123 60.2
Psat0ss25160g0040 Pisum sativum HOM05D000068 ORTHO05D020743 4.1e-25 120.2 161 42.9
GSVIVG01006089001 Vitis vinifera HOM05D006593 ORTHO05D008512 4.5e-16 90.1 95 58.9
CBR_g48853 Chara braunii HOM05D006593 ORTHO05D008512 3.2e-14 84.0 196 34.2
Psat6g040440 Pisum sativum HOM05D000610 ORTHO05D004774 2.2e-10 71.2 162 29.6
PGSC0003DMG400019762 Solanum tuberosum HOM05D006593 ORTHO05D008512 5.5e-06 56.6 32 75.0


User provided reference genes

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