Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005858 Vanilla planifolia HOM05D000891 ORTHO05D026715 8.1e-66 254.2 196 100.0
HPP92_005910 Vanilla planifolia HOM05D000891 ORTHO05D000761 4.2e-38 162.2 197 80.7
CsaV3_1G010890 Cucumis sativus L. HOM05D000891 ORTHO05D000761 3.9e-20 102.4 200 62.0
TAR629G1624 Trochodendron aralioides HOM05D000891 ORTHO05D000761 1.9e-19 100.1 197 58.4
CDE12G0148 Ceratophyllum demersum HOM05D000891 ORTHO05D000761 9.7e-19 97.8 189 34.9
TAR626G1079 Trochodendron aralioides HOM05D000891 ORTHO05D000761 9.7e-19 97.8 197 58.9
TWI63G1417 Tripterygium wilfordii HOM05D000891 ORTHO05D000761 1.1e-17 94.4 198 58.1
C05p09760 Brassica napus HOM05D000891 ORTHO05D000761 1.4e-17 94.0 197 55.8
Hma1.2p1_0813F.1_g222620 Hydrangea macrophylla HOM05D000891 ORTHO05D000761 1.4e-17 94.0 197 62.9
TPR.G7638 Trifolium pratense HOM05D000891 ORTHO05D000761 1.8e-17 93.6 198 53.0
BcaC05g25031 Brassica carinata HOM05D000891 ORTHO05D000761 5.3e-17 92.0 197 56.3
BolC5t29717H Brassica oleracea HOM05D000891 ORTHO05D000761 9.0e-17 91.3 197 55.3
Ca_00621_v3 Cicer arietinum L. HOM05D000891 ORTHO05D000761 1.2e-16 90.9 200 58.5
ClCG03G004860 Citrullus lanatus HOM05D000891 ORTHO05D000761 1.5e-16 90.5 196 61.7
CSS0040738 Camellia sinensis var. sinensis HOM05D000891 ORTHO05D000761 2.0e-16 90.1 202 45.5
CARHR011930 Cardamine hirsuta HOM05D000891 ORTHO05D000761 2.6e-16 89.7 195 55.9
Haze_06789 Corylus avellana HOM05D000891 ORTHO05D000761 7.7e-16 88.2 197 55.8
Medtr2g022860 Medicago truncatula HOM05D000891 ORTHO05D000761 7.7e-16 88.2 196 50.0
Psat1g181920 Pisum sativum HOM05D000891 ORTHO05D000761 7.7e-16 88.2 200 52.0
Sabra11G0000300 Salix brachista HOM05D000891 ORTHO05D000761 3.8e-15 85.9 198 46.0
AL1G22760 Arabidopsis lyrata HOM05D000891 ORTHO05D000761 8.5e-15 84.7 197 57.4
TWI38G0441 Tripterygium wilfordii HOM05D000891 ORTHO05D000761 1.9e-14 83.6 200 58.0
SalBow8G1993 Salvia bowleyana HOM05D000891 ORTHO05D000761 3.2e-14 82.8 198 31.3
CDE02G2552 Ceratophyllum demersum HOM05D000891 ORTHO05D000761 2.7e-13 79.7 195 29.7
C04p27830 Brassica napus HOM05D000891 ORTHO05D026225 7.9e-13 78.2 200 31.5
BolC4t24326H Brassica oleracea HOM05D000891 ORTHO05D026225 7.9e-13 78.2 200 31.5
Sabra04G0009800 Salix brachista HOM05D000891 ORTHO05D000761 2.3e-12 76.6 69 56.5
Potri.004G018000 Populus trichocarpa HOM05D000891 ORTHO05D000761 1.1e-11 74.3 198 48.5
CSS0036990 Camellia sinensis var. sinensis HOM05D000891 ORTHO05D000761 1.5e-11 73.9 69 58.0
Phvul.006G150800 Phaseolus vulgaris HOM05D000891 ORTHO05D000761 2.5e-11 73.2 69 56.5
arahy.Tifrunner.gnm1.ann1.13GHM6 Arachis hypogaea HOM05D000891 ORTHO05D000761 5.7e-11 72.0 69 56.5
arahy.Tifrunner.gnm1.ann1.305IG9 Arachis hypogaea HOM05D000891 ORTHO05D000761 5.7e-11 72.0 69 56.5
VMungo0540G1743 Vigna mungo HOM05D000891 ORTHO05D000761 7.4e-11 71.6 69 58.0
Cfa000246 Carpinus fangiana HOM05D000891 ORTHO05D000761 9.7e-11 71.2 68 51.5
Lalb_Chr15g0087451 Lupinus albus HOM05D000891 ORTHO05D000761 1.3e-10 70.9 69 55.1
Lalb_Chr18g0056251 Lupinus albus HOM05D000891 ORTHO05D000761 3.7e-10 69.3 66 57.6
AT1G11630 Arabidopsis thaliana HOM05D000891 ORTHO05D000761 1.1e-09 67.8 195 55.9
Nitab4.5_0007448g0010 Nicotiana tabacum HOM05D000891 ORTHO05D000761 1.4e-09 67.4 74 51.4
Potri.011G001100 Populus trichocarpa HOM05D000891 ORTHO05D000761 6.9e-09 65.1 69 50.7
Cc09_g01890 Coffea canephora HOM05D000891 ORTHO05D000761 9.1e-09 64.7 199 50.8
Nitab4.5_0002155g0070 Nicotiana tabacum HOM05D000891 ORTHO05D000761 9.1e-09 64.7 74 48.6
Thhalv10007792m.g Eutrema salsugineum HOM05D000891 ORTHO05D000761 1.2e-08 64.3 195 54.4
A06p08200 Brassica napus HOM05D000891 ORTHO05D000761 4.5e-08 62.4 197 54.3
BraA06t24020Z Brassica rapa HOM05D000891 ORTHO05D000761 4.5e-08 62.4 197 54.3
BcaC06g31872 Brassica carinata HOM05D000891 ORTHO05D000761 5.9e-08 62.0 61 50.8
Actinidia26936 Actinidia chinensis HOM05D000891 ORTHO05D000761 1.0e-07 61.2 69 49.3
COL.COLO4_31747 Corchorus olitorius HOM05D000891 ORTHO05D000761 2.2e-07 60.1 66 47.0
Sopen10g001270 Solanum pennellii HOM05D000891 ORTHO05D000761 2.2e-07 60.1 48 62.5
PGSC0003DMG400011285 Solanum tuberosum HOM05D000891 ORTHO05D000761 2.2e-07 60.1 48 62.5
Gorai.004G069000 Gossypium raimondii HOM05D000891 ORTHO05D000761 5.0e-07 58.9 65 47.7
Lj1P1228T67 Lonicera japonica HOM05D000891 ORTHO05D000761 5.0e-07 58.9 48 60.4
Nn1g07110 Nelumbo nucifera HOM05D000891 ORTHO05D000761 5.0e-07 58.9 71 43.7
Medtr6g047970 Medicago truncatula HOM05D000891 ORTHO05D000761 6.5e-07 58.5 183 25.1
Solyc10g005280.1 Solanum lycopersicum HOM05D000891 ORTHO05D000761 6.5e-07 58.5 48 60.4
Aqoxy1G03290 Aquilegia oxysepala HOM05D000891 ORTHO05D000761 8.5e-07 58.2 68 48.5
Oeu033890.1 Olea europaea HOM05D000891 ORTHO05D000761 8.5e-07 58.2 47 59.6
Dinv13875 Davidia involucrata HOM05D000891 ORTHO05D000761 1.1e-06 57.8 48 58.3
Sp1g10240 Schrenkiella parvula HOM05D000891 ORTHO05D000761 1.1e-06 57.8 48 54.2
CAN.G105.16 Capsicum annuum HOM05D000891 ORTHO05D000761 1.9e-06 57.0 47 57.4
Thhalv10023498m.g Eutrema salsugineum HOM05D000891 ORTHO05D000761 1.9e-06 57.0 48 56.2
Aqoxy4G01242 Aquilegia oxysepala HOM05D058852 ORTHO05D026715 2.5e-06 56.6 66 37.9
SGA_v2.0_scaffold7G03868 Striga asiatica HOM05D000891 ORTHO05D000761 2.5e-06 56.6 46 56.5
Thecc.06G217800 Theobroma cacao HOM05D000891 ORTHO05D000761 2.5e-06 56.6 48 52.1
Aa31LG2G8960 Aethionema arabicum HOM05D000891 ORTHO05D000761 3.2e-06 56.2 48 58.3
COL.COLO4_31729 Corchorus olitorius HOM05D000891 ORTHO05D000761 3.2e-06 56.2 46 54.3
Gohir.A09G069200 Gossypium hirsutum HOM05D000891 ORTHO05D000761 3.2e-06 56.2 68 44.1
Peaxi162Scf00203g00126 Petunia axillaris HOM05D000891 ORTHO05D000761 3.2e-06 56.2 47 55.3
Sed0018063 Sechium edule HOM05D000891 ORTHO05D000761 3.2e-06 56.2 200 54.5
CARHR050450 Cardamine hirsuta HOM05D000891 ORTHO05D000761 4.2e-06 55.8 46 56.5
MSTRG.14642 Avicennia marina HOM05D000891 ORTHO05D000761 5.5e-06 55.5 47 59.6
BcaNung04805 Brassica carinata HOM05D000891 ORTHO05D000761 5.5e-06 55.5 48 54.2
Sc05g0009060 Simmondsia chinensis HOM05D000891 ORTHO05D000761 5.5e-06 55.5 48 56.2
THA.LOC104809510 Tarenaya hassleriana HOM05D000891 ORTHO05D000761 5.5e-06 55.5 48 54.2
MD05G1343300 Malus domestica HOM05D000891 ORTHO05D000761 7.2e-06 55.1 48 54.2
Gohir.D10G013900 Gossypium hirsutum HOM05D000891 ORTHO05D000761 9.4e-06 54.7 45 55.6
Gorai.011G015700 Gossypium raimondii HOM05D000891 ORTHO05D000761 9.4e-06 54.7 45 55.6
HanXRQChr05g0129621 Helianthus annuus HOM05D000891 ORTHO05D000761 9.4e-06 54.7 45 55.6


User provided reference genes

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