Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005846 Vanilla planifolia HOM05D008523 ORTHO05D010723 3.4e-176 621.7 310 100.0
HPP92_005840 Vanilla planifolia HOM05D008523 ORTHO05D010723 1.1e-161 573.5 289 98.6
HPP92_027951 Vanilla planifolia HOM05D008523 ORTHO05D010723 2.2e-66 256.9 226 59.3
Nn1g08698 Nelumbo nucifera HOM05D008523 ORTHO05D010723 2.1e-64 250.4 224 56.7
TAR381G0860 Trochodendron aralioides HOM05D008523 ORTHO05D010723 6.0e-64 248.8 208 59.6
Aqoxy6G00203 Aquilegia oxysepala HOM05D008523 ORTHO05D010723 2.3e-63 246.9 210 58.1
MD08G1168300 Malus domestica HOM05D008523 ORTHO05D010723 4.3e-62 242.7 274 49.6
GSVIVG01008905001 Vitis vinifera HOM05D008523 ORTHO05D010723 2.0e-59 233.8 209 56.9
Atru.chr13.1404 Acer truncatum HOM05D008523 ORTHO05D010723 2.6e-59 233.4 215 54.9
Dinv40375 Davidia involucrata HOM05D008523 ORTHO05D010723 2.6e-59 233.4 214 56.1
PGR042G3956 Punica granatum HOM05D008523 ORTHO05D010723 4.5e-59 232.6 215 54.4
PSO170G6317 Papaver somniferum HOM05D008523 ORTHO05D010723 2.7e-56 223.4 209 54.5
SEGI_03454 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 4.3e-54 216.1 261 47.9
CANSAT25G1340 Cannabis sativa HOM05D008523 ORTHO05D010723 7.4e-54 215.3 228 51.3
AagrBONN_evm.TU.Sc2ySwM_362.1100 Anthoceros agrestis HOM05D008523 ORTHO05D010723 3.1e-52 209.9 177 59.3
SMO347G0131 Selaginella moellendorffii HOM05D008523 ORTHO05D010723 3.1e-52 209.9 261 45.2
Rhsim07G0163700 Rhododendron simsii HOM05D008523 ORTHO05D010723 4.0e-52 209.5 185 57.3
Migut.C01156 Erythranthe guttata HOM05D008523 ORTHO05D010723 1.5e-51 207.6 214 51.4
Pp3c11_25910 Physcomitrium patens HOM05D008523 ORTHO05D010723 2.0e-51 207.2 175 59.4
CBR_g66722 Chara braunii HOM05D008523 ORTHO05D010723 3.8e-50 203.0 192 55.2
Mapoly0082s0057 Marchantia polymorpha HOM05D008523 ORTHO05D010723 1.6e-48 197.6 186 54.3
Thecc.08G120800 Theobroma cacao HOM05D008523 ORTHO05D010723 3.9e-47 193.0 191 51.8
MCO15G259 Micromonas commoda HOM05D008523 ORTHO05D010723 7.9e-40 168.7 167 52.7
PRCOL_00001244 Prasinoderma coloniale HOM05D008523 ORTHO05D010723 6.3e-37 159.1 167 47.9
QL05p051451 Quercus lobata HOM05D000038 ORTHO05D000423 2.0e-35 154.1 128 58.6
Ciclev10003859m.g Citrus clementina HOM05D008523 ORTHO05D010723 3.4e-35 153.3 132 56.1
Dinv01183 Davidia involucrata HOM05D008523 ORTHO05D010723 7.2e-33 145.6 130 55.4
PRCOL_00000745 Prasinoderma coloniale HOM05D008523 ORTHO05D010723 3.6e-32 143.3 168 47.0
QL05p051411 Quercus lobata HOM05D000038 ORTHO05D000423 4.6e-32 142.9 146 51.4
Cfa015985 Carpinus fangiana HOM05D008523 ORTHO05D000423 1.0e-31 141.7 131 55.7
Solyc11g013090.2 Solanum lycopersicum HOM05D008523 ORTHO05D010723 3.0e-31 140.2 401 29.7
MBI03_g05982_MAGBIO Magnolia biondii HOM05D008523 ORTHO05D010723 3.3e-30 136.7 202 39.1
MBI03_g26564_MAGBIO Magnolia biondii HOM05D008523 ORTHO05D010723 3.3e-30 136.7 106 60.4
Nitab4.5_0010364g0010 Nicotiana tabacum HOM05D000038 ORTHO05D000423 1.7e-29 134.4 157 51.0
Peaxi162Scf00451g00722 Petunia axillaris HOM05D000038 ORTHO05D000423 1.7e-29 134.4 151 50.3
Nitab4.5_0004554g0040 Nicotiana tabacum HOM05D000038 ORTHO05D000423 8.2e-29 132.1 128 55.5
Gorai.010G048500 Gossypium raimondii HOM05D000038 ORTHO05D000423 2.4e-28 130.6 137 48.9
HPP92_009511 Vanilla planifolia HOM05D008523 ORTHO05D010723 4.1e-28 129.8 190 46.3
Cpa.g.sc36.25 Carica papaya HOM05D008523 ORTHO05D010723 5.3e-28 129.4 109 56.9
Haze_00486 Corylus avellana HOM05D008523 ORTHO05D010723 1.1e-25 121.7 111 55.0
SalBow7G0429 Salvia bowleyana HOM05D008523 ORTHO05D010723 1.5e-22 111.3 152 44.1
Gohir.A06G042401 Gossypium hirsutum HOM05D000038 ORTHO05D000423 4.8e-21 106.3 115 46.1
Gohir.D06G043400 Gossypium hirsutum HOM05D000038 ORTHO05D000423 6.3e-21 105.9 110 50.9
Haze_00484 Corylus avellana HOM05D008523 ORTHO05D010723 1.6e-19 101.3 129 44.2
PGSC0003DMG402000914 Solanum tuberosum HOM05D008523 ORTHO05D010723 1.6e-19 101.3 114 50.0
CSS0029332 Camellia sinensis var. sinensis HOM05D008523 ORTHO05D010723 3.5e-19 100.1 109 47.7
Gohir.A06G042301 Gossypium hirsutum HOM05D008523 ORTHO05D010723 3.5e-19 100.1 104 51.0
COL.COLO4_07273 Corchorus olitorius HOM05D000038 ORTHO05D000423 1.7e-18 97.8 89 53.9
Sopen11g007810 Solanum pennellii HOM05D000038 ORTHO05D000423 5.5e-17 92.8 101 51.5
PGSC0003DMG401000914 Solanum tuberosum HOM05D008523 ORTHO05D010723 7.2e-17 92.4 103 50.5
SalBow7G3869 Salvia bowleyana HOM05D008523 ORTHO05D010723 8.8e-15 85.5 152 36.8
COL.COLO4_00988 Corchorus olitorius HOM05D008523 ORTHO05D010723 2.0e-14 84.3 106 40.6
Ca_31317_v3 Cicer arietinum L. HOM05D008523 ORTHO05D010723 2.2e-13 80.9 100 45.0
Ca_29195_v3 Cicer arietinum L. HOM05D008523 ORTHO05D010723 7.7e-11 72.4 194 32.0
SEGI_37575 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 6.1e-08 62.8 121 34.7


User provided reference genes

Program Settings