Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005766 Vanilla planifolia HOM05D003641 ORTHO05D004915 2.3e-207 725.3 364 100.0
HPP92_009321 Vanilla planifolia HOM05D003641 ORTHO05D004915 5.2e-159 564.7 365 75.1
Zm00001eb037640 Zea mays HOM05D003641 ORTHO05D004915 1.9e-140 503.1 364 68.4
Os08g0464000 Oryza sativa ssp. japonica HOM05D003641 ORTHO05D004915 1.2e-139 500.4 365 67.1
Sc13g0002360 Simmondsia chinensis HOM05D003641 ORTHO05D004915 7.8e-139 497.7 364 65.4
TAR636G0728 Trochodendron aralioides HOM05D003641 ORTHO05D004915 7.8e-139 497.7 364 66.5
TAR633G0428 Trochodendron aralioides HOM05D003641 ORTHO05D004915 3.9e-138 495.4 364 67.0
MBI19_g17419_MAGBIO Magnolia biondii HOM05D003641 ORTHO05D004915 1.9e-137 493.0 366 66.7
TWI74G1529 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 2.5e-137 492.7 365 66.6
Zm00001eb177410 Zea mays HOM05D003641 ORTHO05D004915 2.5e-137 492.7 365 65.5
TWI53G2154 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 3.3e-137 492.3 365 66.6
Dinv24057 Davidia involucrata HOM05D003641 ORTHO05D004915 9.5e-137 490.7 364 65.9
Haze_20012 Corylus avellana HOM05D003641 ORTHO05D004915 1.6e-136 490.0 364 65.4
Cfa020150 Carpinus fangiana HOM05D003641 ORTHO05D004915 2.1e-136 489.6 364 64.8
Aqoxy1G00140 Aquilegia oxysepala HOM05D003641 ORTHO05D004915 6.2e-136 488.0 365 64.9
HanXRQChr01g0010591 Helianthus annuus HOM05D003641 ORTHO05D004915 6.8e-135 484.6 364 64.8
Manes.08G042800 Manihot esculenta HOM05D003641 ORTHO05D004915 1.5e-134 483.4 365 65.5
DCAR_017036 Daucus carota HOM05D003641 ORTHO05D004915 2.0e-134 483.0 364 64.8
Lju124A24T32 Lonicera japonica HOM05D003641 ORTHO05D004915 2.0e-134 483.0 364 63.2
Duzib093G1627 Durio zibethinus HOM05D003641 ORTHO05D004915 2.6e-134 482.6 370 63.8
MD14G1054700 Malus domestica HOM05D003641 ORTHO05D004915 2.6e-134 482.6 366 64.5
Oeu006209.1 Olea europaea HOM05D003641 ORTHO05D004915 2.6e-134 482.6 370 63.5
CsaV3_3G038670 Cucumis sativus L. HOM05D003641 ORTHO05D004915 3.4e-134 482.3 365 63.6
CANSAT64G0207 Cannabis sativa HOM05D003641 ORTHO05D004915 4.4e-134 481.9 366 63.7
CiPaw.09G029000 Carya illinoinensis HOM05D003641 ORTHO05D004915 4.4e-134 481.9 365 63.8
ClCG10G017650 Citrullus lanatus HOM05D003641 ORTHO05D004915 4.4e-134 481.9 364 63.5
Manes.09G037400 Manihot esculenta HOM05D003641 ORTHO05D004915 5.8e-134 481.5 367 64.3
FvH4_6g21990 Fragaria vesca HOM05D003641 ORTHO05D004915 1.3e-133 480.3 365 64.4
FAN14G0097 Fragaria x ananassa HOM05D003641 ORTHO05D004915 1.3e-133 480.3 365 64.4
Ciclev10012043m.g Citrus clementina HOM05D003641 ORTHO05D004915 2.9e-133 479.2 368 64.4
Lj2A365T90 Lonicera japonica HOM05D003641 ORTHO05D004915 3.7e-133 478.8 364 64.3
CiPaw.10G025600 Carya illinoinensis HOM05D003641 ORTHO05D004915 6.4e-133 478.0 364 63.5
Rhsim03G0004900 Rhododendron simsii HOM05D003641 ORTHO05D004915 6.4e-133 478.0 364 64.0
Hund24813 Selenicereus undatus HOM05D003641 ORTHO05D004915 8.3e-133 477.6 366 63.4
ECA248G0025 Erigeron canadensis HOM05D003641 ORTHO05D004915 1.4e-132 476.9 364 63.7
SGA_v2.0_scaffold105G30499 Striga asiatica HOM05D003641 ORTHO05D004915 1.4e-132 476.9 367 63.5
ATR0598G178 Amborella trichopoda HOM05D003641 ORTHO05D004915 1.9e-132 476.5 364 62.4
PGR004G2452 Punica granatum HOM05D003641 ORTHO05D004915 1.9e-132 476.5 364 64.0
CAN.G960.10 Capsicum annuum HOM05D003641 ORTHO05D004915 3.2e-132 475.7 366 61.7
Oeu063867.1 Olea europaea HOM05D003641 ORTHO05D004915 3.2e-132 475.7 365 64.7
Peaxi162Scf00258g00921 Petunia axillaris HOM05D003641 ORTHO05D004915 3.2e-132 475.7 365 63.8
Atru.chr8.1148 Acer truncatum HOM05D003641 ORTHO05D004915 4.1e-132 475.3 365 62.5
RcHm_v2.0_Chr3g0479291 Rosa chinensis HOM05D003641 ORTHO05D004915 5.4e-132 474.9 365 64.9
vmacro07894 Vaccinium macrocarpon HOM05D003641 ORTHO05D004915 7.0e-132 474.6 364 63.7
Lsat_1_v5_gn_5_164500 Lactuca sativa HOM05D003641 ORTHO05D004915 1.2e-131 473.8 358 65.4
PGSC0003DMG400011447 Solanum tuberosum HOM05D003641 ORTHO05D004915 1.2e-131 473.8 364 62.9
AUR62011998 Chenopodium quinoa HOM05D003641 ORTHO05D004915 2.1e-131 473.0 365 62.2
CSS0018208 Camellia sinensis var. sinensis HOM05D003641 ORTHO05D004915 2.7e-131 472.6 364 63.2
CDE05G2508 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 3.5e-131 472.2 364 64.0
Sopen10g029550 Solanum pennellii HOM05D003641 ORTHO05D004915 3.5e-131 472.2 364 61.8
Eucgr.A02465 Eucalyptus grandis HOM05D003641 ORTHO05D004915 6.0e-131 471.5 365 62.2
SalBow6G5303 Salvia bowleyana HOM05D003641 ORTHO05D004915 6.0e-131 471.5 364 62.9
Cpa.g.sc85.60 Carica papaya HOM05D003641 ORTHO05D004915 7.8e-131 471.1 364 63.2
Duzib128G0491 Durio zibethinus HOM05D003641 ORTHO05D004915 7.8e-131 471.1 367 62.4
Solyc10g078930.2 Solanum lycopersicum HOM05D003641 ORTHO05D004915 1.0e-130 470.7 364 61.5
MELO3C009611.2 Cucumis melo HOM05D003641 ORTHO05D004915 1.3e-130 470.3 364 61.5
CDE11G0833 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 1.7e-130 469.9 364 63.7
Ca_08533_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.7e-130 469.9 366 61.7
MSTRG.19915 Avicennia marina HOM05D003641 ORTHO05D004915 2.3e-130 469.5 364 61.8
FAN02G1826 Fragaria x ananassa HOM05D003641 ORTHO05D004915 2.3e-130 469.5 364 63.2
Gorai.012G099600 Gossypium raimondii HOM05D003641 ORTHO05D004915 3.0e-130 469.2 368 62.2
Nitab4.5_0007274g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 3.0e-130 469.2 364 63.5
MD12G1055300 Malus domestica HOM05D003641 ORTHO05D004915 3.9e-130 468.8 364 62.6
Migut.J01850 Erythranthe guttata HOM05D003641 ORTHO05D004915 5.1e-130 468.4 364 62.6
EL10Ac3g06892 Beta vulgaris HOM05D003641 ORTHO05D004915 6.6e-130 468.0 364 62.1
FAN05G2657 Fragaria x ananassa HOM05D003641 ORTHO05D004915 6.6e-130 468.0 365 63.3
Gohir.D04G089500 Gossypium hirsutum HOM05D003641 ORTHO05D004915 8.6e-130 467.6 368 62.0
Thecc.05G174300 Theobroma cacao HOM05D003641 ORTHO05D004915 1.1e-129 467.2 365 62.2
FAN09G3507 Fragaria x ananassa HOM05D003641 ORTHO05D004915 1.9e-129 466.5 365 63.0
SGA_v2.0_scaffold69G23056 Striga asiatica HOM05D003641 ORTHO05D004915 1.9e-129 466.5 364 62.9
Aa31sc80G90 Aethionema arabicum HOM05D003641 ORTHO05D004915 4.3e-129 465.3 371 60.1
Glyma.03G146100 Glycine max HOM05D003641 ORTHO05D004915 4.3e-129 465.3 364 61.5
AUR62015343 Chenopodium quinoa HOM05D003641 ORTHO05D004915 9.5e-129 464.2 364 61.8
Gohir.A04G051900 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.6e-128 463.4 367 61.6
Potri.006G194400 Populus trichocarpa HOM05D003641 ORTHO05D004915 1.6e-128 463.4 364 61.0
Sabra06G0149100 Salix brachista HOM05D003641 ORTHO05D004915 1.6e-128 463.4 364 61.0
Psat3g067000 Pisum sativum HOM05D003641 ORTHO05D004915 2.1e-128 463.0 364 61.0
Prupe.7G080100 Prunus persica HOM05D003641 ORTHO05D004915 2.1e-128 463.0 364 61.3
COL.COLO4_29349 Corchorus olitorius HOM05D003641 ORTHO05D004915 2.8e-128 462.6 365 61.6
Sed0007356 Sechium edule HOM05D003641 ORTHO05D004915 3.6e-128 462.2 365 60.8
Hma1.2p1_0676F.1_g201930 Hydrangea macrophylla HOM05D003641 ORTHO05D004915 6.2e-128 461.5 365 62.2
QL07p024293 Quercus lobata HOM05D003641 ORTHO05D004915 1.4e-127 460.3 372 61.0
Lj1g0002782 Lotus japonicus HOM05D003641 ORTHO05D004915 2.3e-127 459.5 364 59.9
Medtr7g093500 Medicago truncatula HOM05D003641 ORTHO05D004915 2.3e-127 459.5 364 61.0
Sabra16G0062900 Salix brachista HOM05D003641 ORTHO05D004915 4.0e-127 458.8 364 61.0
VMungo1383G0826 Vigna mungo HOM05D003641 ORTHO05D004915 8.9e-127 457.6 364 61.8
Hund19209 Selenicereus undatus HOM05D003641 ORTHO05D004915 1.2e-126 457.2 366 62.0
BraA05t22525Z Brassica rapa HOM05D003641 ORTHO05D004915 2.0e-126 456.4 364 60.7
Cc06_g15710 Coffea canephora HOM05D003641 ORTHO05D004915 3.4e-126 455.7 364 60.7
THA.LOC104826776 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 5.8e-126 454.9 365 60.8
Potri.016G060100 Populus trichocarpa HOM05D003641 ORTHO05D004915 7.5e-126 454.5 364 60.4
AT3G12050 Arabidopsis thaliana HOM05D003641 ORTHO05D004915 9.9e-126 454.1 373 59.2
BcaB06g25550 Brassica carinata HOM05D003641 ORTHO05D004915 2.9e-125 452.6 365 60.3
A05p37290 Brassica napus HOM05D003641 ORTHO05D004915 4.9e-125 451.8 364 60.4
AL3G23660 Arabidopsis lyrata HOM05D003641 ORTHO05D004915 6.4e-125 451.4 372 58.3
CARHR086620 Cardamine hirsuta HOM05D003641 ORTHO05D004915 8.3e-125 451.1 367 58.9
PSO724G0609 Papaver somniferum HOM05D003641 ORTHO05D004915 1.1e-124 450.7 366 59.6
Phvul.001G143800 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 1.1e-124 450.7 368 59.8
Sp3g10280 Schrenkiella parvula HOM05D003641 ORTHO05D004915 1.1e-124 450.7 373 59.5
arahy.Tifrunner.gnm1.ann1.86C462 Arachis hypogaea HOM05D003641 ORTHO05D004915 1.4e-124 450.3 367 58.9
arahy.Tifrunner.gnm1.ann1.G8NWJQ Arachis hypogaea HOM05D003641 ORTHO05D004915 2.4e-124 449.5 367 58.6
PSO135G0566 Papaver somniferum HOM05D003641 ORTHO05D004915 3.2e-124 449.1 367 59.4
C05p55760 Brassica napus HOM05D003641 ORTHO05D004915 4.1e-124 448.7 364 59.3
Glyma.19G149300 Glycine max HOM05D003641 ORTHO05D004915 4.1e-124 448.7 365 60.8
THA.LOC104809934 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 7.1e-124 448.0 364 59.1
Thhalv10021006m.g Eutrema salsugineum HOM05D003641 ORTHO05D004915 9.2e-124 447.6 373 59.2
Lalb_Chr18g0047991 Lupinus albus HOM05D003641 ORTHO05D004915 1.0e-122 444.1 365 58.6
Lj5g0013930 Lotus japonicus HOM05D003641 ORTHO05D004915 1.7e-122 443.4 367 59.1
unitig_899.g15167 Utricularia gibba HOM05D003641 ORTHO05D004915 6.6e-122 441.4 364 58.8
Nitab4.5_0001137g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.1e-121 440.7 364 59.9
Nitab4.5_0000105g0210 Nicotiana tabacum HOM05D003641 ORTHO05D004915 3.3e-121 439.1 362 60.8
Ca_12045_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.2e-120 437.2 364 57.7
Mapoly0109s0023 Marchantia polymorpha HOM05D003641 ORTHO05D004915 1.4e-119 433.7 366 59.0
TPR.G30301 Trifolium pratense HOM05D003641 ORTHO05D004915 1.4e-119 433.7 364 57.4
Nitab4.5_0002343g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.8e-119 433.3 368 60.3
Carub.0003s1139 Capsella rubella HOM05D003641 ORTHO05D004915 3.1e-119 432.6 370 55.9
Pp3c9_15400 Physcomitrium patens HOM05D003641 ORTHO05D004915 1.5e-118 430.3 367 55.9
VMungo0720G0815 Vigna mungo HOM05D003641 ORTHO05D004915 1.5e-118 430.3 366 57.4
Ah.04g152830 Amaranthus hybridus HOM05D003641 ORTHO05D004915 2.0e-118 429.9 349 59.9
Pp3c15_21400 Physcomitrium patens HOM05D003641 ORTHO05D004915 2.0e-118 429.9 364 55.8
BolC5t34243H Brassica oleracea HOM05D003641 ORTHO05D004915 7.6e-118 427.9 407 53.1
Phvul.007G261100 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 1.9e-116 423.3 364 56.3
AagrBONN_evm.TU.Sc2ySwM_344.3694 Anthoceros agrestis HOM05D003641 ORTHO05D004915 2.7e-115 419.5 368 55.7
Glyma.09G109200 Glycine max HOM05D003641 ORTHO05D004915 4.6e-115 418.7 366 55.7
unitig_746.g26803 Utricularia gibba HOM05D003641 ORTHO05D004915 1.7e-114 416.8 348 58.3
SMO203G0054 Selaginella moellendorffii HOM05D003641 ORTHO05D004915 4.3e-113 412.1 368 52.7
BcaC05g29294 Brassica carinata HOM05D003641 ORTHO05D004915 2.1e-112 409.8 364 55.8
Medtr0136s0060 Medicago truncatula HOM05D003641 ORTHO05D004915 3.6e-112 409.1 365 54.2
Glyma.02G171100 Glycine max HOM05D003641 ORTHO05D004915 6.2e-112 408.3 364 54.9
Nn7g35972 Nelumbo nucifera HOM05D003641 ORTHO05D004915 4.4e-110 402.1 313 63.3
Nn7g35971 Nelumbo nucifera HOM05D003641 ORTHO05D004915 9.3e-108 394.4 301 64.5
GSVIVG01033476001 Vitis vinifera HOM05D003641 ORTHO05D004915 2.8e-96 356.3 364 50.5
Actinidia22049 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.7e-93 347.1 364 51.4
Psat6g123080 Pisum sativum HOM05D003641 ORTHO05D004915 2.1e-91 340.1 307 54.1
Actinidia14376 Actinidia chinensis HOM05D003641 ORTHO05D004915 3.1e-87 326.2 287 57.5
Gorai.012G099500 Gossypium raimondii HOM05D003641 ORTHO05D004915 6.9e-87 325.1 337 50.4
TPR.G35793 Trifolium pratense HOM05D003641 ORTHO05D004915 1.2e-86 324.3 315 51.1
Gohir.D04G089400 Gossypium hirsutum HOM05D003641 ORTHO05D004915 8.2e-72 275.0 216 64.8
PRCOL_00005901 Prasinoderma coloniale HOM05D003641 ORTHO05D004915 4.7e-67 259.2 364 38.7
SEGI_39925 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 1.4e-66 257.7 281 47.3
MCO07G236 Micromonas commoda HOM05D003641 ORTHO05D004915 5.1e-66 255.8 362 40.3
BcaC09g48210 Brassica carinata HOM05D003641 ORTHO05D004915 6.7e-58 228.8 252 49.6
Gohir.A04G052000 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.8e-55 220.7 178 62.4
Cre03.g199300 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D004915 3.1e-55 219.9 364 34.3
Actinidia32404 Actinidia chinensis HOM05D003641 ORTHO05D004915 6.8e-50 202.2 115 79.1
arahy.Tifrunner.gnm1.ann1.EPN7T6 Arachis hypogaea HOM05D003641 ORTHO05D004915 1.5e-49 201.1 148 63.5
Gohir.A04G052026 Gossypium hirsutum HOM05D003641 ORTHO05D004915 2.0e-49 200.7 163 56.4
arahy.Tifrunner.gnm1.ann1.VQQW03 Arachis hypogaea HOM05D003641 ORTHO05D004915 1.7e-48 197.6 126 71.4
Ca_31327_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.7e-32 144.4 85 70.6
SEGI_05882 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 1.4e-31 141.4 163 49.7
Ca_14569_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.8e-31 141.0 85 69.4
Ca_20435_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 4.1e-31 139.8 85 68.2
Ca_09720_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.0e-29 135.2 85 65.9
Glyma.09G095600 Glycine max HOM05D003641 ORTHO05D004915 7.3e-28 129.0 139 51.8
arahy.Tifrunner.gnm1.ann1.20Y790 Arachis hypogaea HOM05D003641 ORTHO05D004915 2.3e-26 124.0 106 59.4
HanXRQChr03g0083061 Helianthus annuus HOM05D003641 ORTHO05D004915 6.4e-24 115.9 145 40.7
Hund07687 Selenicereus undatus HOM05D003641 ORTHO05D021213 1.1e-23 115.2 195 41.0
Hund07686 Selenicereus undatus HOM05D003641 ORTHO05D011049 3.2e-23 113.6 192 39.1
Dinv18651 Davidia involucrata HOM05D003641 ORTHO05D004915 3.5e-22 110.2 63 81.0
Dinv18648 Davidia involucrata HOM05D003641 ORTHO05D004915 1.7e-21 107.8 58 86.2
Dinv26263 Davidia involucrata HOM05D003641 ORTHO05D004915 1.7e-21 107.8 58 86.2
MCO11G399 Micromonas commoda HOM05D003641 ORTHO05D044219 2.1e-19 100.9 173 35.8
Ca_12039_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 6.8e-18 95.9 58 74.1
Nn8g39306 Nelumbo nucifera HOM05D003641 ORTHO05D004915 6.8e-18 95.9 60 73.3
EL10Ac8g19334 Beta vulgaris HOM05D003641 ORTHO05D027013 3.7e-16 90.1 83 54.2
arahy.Tifrunner.gnm1.ann1.XYD4PT Arachis hypogaea HOM05D003641 ORTHO05D038899 2.4e-15 87.4 76 60.5
CBR_g18730 Chara braunii HOM05D003641 ORTHO05D004915 4.1e-15 86.7 55 69.1
Ca_03268_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 5.4e-15 86.3 59 66.1
Cre08.g358539 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D044219 2.5e-12 77.4 157 31.8
Ca_20824_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 7.3e-12 75.9 51 60.8
BolC1t05367H Brassica oleracea HOM05D003641 ORTHO05D038899 3.6e-11 73.6 49 63.3
PRCOL_00004577 Prasinoderma coloniale HOM05D003641 ORTHO05D049026 1.2e-09 68.6 165 30.3
SGA_v2.0_scaffold200G41266 Striga asiatica HOM05D037212 ORTHO05D027013 2.6e-09 67.4 78 43.6
arahy.Tifrunner.gnm1.ann1.5I9U23 Arachis hypogaea HOM05D003641 ORTHO05D085625 3.2e-07 60.5 117 36.8
CsaV3_5G015400 Cucumis sativus L. HOM05D003641 ORTHO05D004915 3.2e-07 60.5 50 52.0
Peaxi162Scf00003g04539 Petunia axillaris HOM05D000312 ORTHO05D000221 9.2e-07 58.9 86 39.5
VMungo0464G0530 Vigna mungo HOM05D003641 ORTHO05D004915 7.8e-06 55.8 60 40.0


User provided reference genes

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