Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005637 Vanilla planifolia HOM05D006686 ORTHO05D008463 7.2e-286 986.5 476 100.0
HPP92_005643 Vanilla planifolia HOM05D006686 ORTHO05D008463 8.0e-277 956.4 476 97.7
Nn5g27352 Nelumbo nucifera HOM05D006686 ORTHO05D008463 1.7e-202 709.5 449 74.2
TAR381G1724 Trochodendron aralioides HOM05D006686 ORTHO05D008463 3.0e-199 698.7 457 72.2
MBI03_g20875_MAGBIO Magnolia biondii HOM05D006686 ORTHO05D008463 6.7e-199 697.6 478 70.5
Dinv29673 Davidia involucrata HOM05D006686 ORTHO05D008463 3.8e-194 681.8 462 71.0
CSS0008654 Camellia sinensis var. sinensis HOM05D006686 ORTHO05D008463 8.5e-194 680.6 427 74.0
ATR1089G117 Amborella trichopoda HOM05D006686 ORTHO05D008463 7.9e-192 674.1 473 68.3
CDE04G2622 Ceratophyllum demersum HOM05D006686 ORTHO05D008463 7.9e-192 674.1 475 68.4
GSVIVG01023154001 Vitis vinifera HOM05D006686 ORTHO05D008463 2.0e-190 669.5 431 73.5
FvH4_5g27990 Fragaria vesca HOM05D006686 ORTHO05D008463 3.7e-189 665.2 473 67.9
Manes.07G028500 Manihot esculenta HOM05D006686 ORTHO05D008463 6.3e-189 664.5 433 72.3
QL02p103152 Quercus lobata HOM05D006686 ORTHO05D008463 1.1e-188 663.7 478 67.4
FAN04G2541 Fragaria x ananassa HOM05D006686 ORTHO05D008463 1.5e-187 659.8 476 67.0
FAN18G1657 Fragaria x ananassa HOM05D006686 ORTHO05D008463 2.0e-187 659.4 478 67.2
MD08G1247400 Malus domestica HOM05D006686 ORTHO05D008463 4.5e-187 658.3 435 71.5
Cfa004450 Carpinus fangiana HOM05D006686 ORTHO05D008463 7.7e-187 657.5 475 66.7
Prupe.1G584700 Prunus persica HOM05D006686 ORTHO05D008463 1.7e-186 656.4 454 69.6
Sabra01G0173400 Salix brachista HOM05D006686 ORTHO05D008463 3.2e-185 652.1 431 70.8
DCAR_022282 Daucus carota HOM05D006686 ORTHO05D008463 7.2e-185 651.0 456 68.9
MELO3C016473.2 Cucumis melo HOM05D006686 ORTHO05D008463 9.4e-185 650.6 474 66.0
Gorai.011G003800 Gossypium raimondii HOM05D006686 ORTHO05D008463 1.2e-184 650.2 431 69.8
CANSAT01G1449 Cannabis sativa HOM05D006686 ORTHO05D008463 2.1e-184 649.4 475 66.9
ClCG10G007390 Citrullus lanatus HOM05D006686 ORTHO05D008463 3.6e-184 648.7 474 66.2
Thecc.06G000500 Theobroma cacao HOM05D006686 ORTHO05D008463 3.6e-184 648.7 443 69.3
Gohir.D10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 4.7e-184 648.3 431 69.6
CsaV3_3G006630 Cucumis sativus L. HOM05D006686 ORTHO05D008463 1.0e-183 647.1 474 65.6
HanXRQChr01g0013991 Helianthus annuus HOM05D006686 ORTHO05D008463 1.0e-183 647.1 438 69.4
vmacro19835 Vaccinium macrocarpon HOM05D006686 ORTHO05D008463 1.4e-183 646.7 425 71.1
PSO210G5299 Papaver somniferum HOM05D006686 ORTHO05D008463 2.3e-183 646.0 433 69.7
COL.COLO4_26876 Corchorus olitorius HOM05D006686 ORTHO05D008463 6.7e-183 644.4 439 69.0
Gohir.A10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 2.0e-182 642.9 431 69.1
MSTRG.16472 Avicennia marina HOM05D006686 ORTHO05D008463 4.4e-182 641.7 456 66.0
Cc02_g23500 Coffea canephora HOM05D006686 ORTHO05D008463 4.4e-182 641.7 428 70.6
ECA236G4971 Erigeron canadensis HOM05D006686 ORTHO05D008463 4.4e-182 641.7 470 66.6
Potri.004G228500 Populus trichocarpa HOM05D006686 ORTHO05D008463 1.7e-181 639.8 433 69.5
Ah.03g136810 Amaranthus hybridus HOM05D006686 ORTHO05D008463 1.1e-180 637.1 428 69.6
PGR042G1861 Punica granatum HOM05D006686 ORTHO05D008463 1.1e-180 637.1 441 67.1
SGA_v2.0_scaffold254G45251 Striga asiatica HOM05D006686 ORTHO05D008463 1.1e-180 637.1 457 68.3
Migut.B00728 Erythranthe guttata HOM05D006686 ORTHO05D008463 2.4e-180 636.0 457 66.5
Eucgr.G00081 Eucalyptus grandis HOM05D006686 ORTHO05D008463 3.1e-180 635.6 486 64.4
Duzib235G0699 Durio zibethinus HOM05D006686 ORTHO05D008463 2.6e-179 632.5 428 68.5
Lj4g0021342 Lotus japonicus HOM05D006686 ORTHO05D008463 5.9e-179 631.3 464 65.5
Nitab4.5_0001129g0010 Nicotiana tabacum HOM05D006686 ORTHO05D008463 1.0e-178 630.6 429 69.7
VMungo1215G3175 Vigna mungo HOM05D006686 ORTHO05D008463 6.5e-178 627.9 387 75.7
PGSC0003DMG402024871 Solanum tuberosum HOM05D006686 ORTHO05D008463 2.5e-177 625.9 428 69.6
TWI59G1206 Tripterygium wilfordii HOM05D006686 ORTHO05D008463 9.4e-177 624.0 461 64.9
Nitab4.5_0001057g0120 Nicotiana tabacum HOM05D006686 ORTHO05D008463 1.6e-176 623.2 429 69.0
Solyc01g103110.3 Solanum lycopersicum HOM05D006686 ORTHO05D008463 1.6e-176 623.2 431 68.9
Os04g0442200 Oryza sativa ssp. japonica HOM05D006686 ORTHO05D008463 2.7e-176 622.5 462 65.8
CAN.G855.45 Capsicum annuum HOM05D006686 ORTHO05D008463 3.0e-175 619.0 428 68.9
Lsat_1_v5_gn_7_75180 Lactuca sativa HOM05D006686 ORTHO05D008463 3.0e-175 619.0 424 68.6
Sopen01g045530 Solanum pennellii HOM05D006686 ORTHO05D008463 5.2e-175 618.2 431 68.4
Aa31LG3G6890 Aethionema arabicum HOM05D006686 ORTHO05D008463 1.5e-174 616.7 432 66.2
THA.LOC104809035 Tarenaya hassleriana HOM05D006686 ORTHO05D008463 2.6e-174 615.9 461 64.6
Phvul.003G075600 Phaseolus vulgaris HOM05D006686 ORTHO05D008463 4.4e-174 615.1 387 74.2
Glyma.07G273000 Glycine max HOM05D006686 ORTHO05D008463 7.5e-174 614.4 390 74.1
EL10Ac6g14006 Beta vulgaris HOM05D006686 ORTHO05D008463 2.8e-173 612.5 456 65.1
Peaxi162Scf00011g01843 Petunia axillaris HOM05D006686 ORTHO05D008463 3.7e-173 612.1 429 68.8
Sp4g17050 Schrenkiella parvula HOM05D006686 ORTHO05D008463 1.4e-172 610.1 461 63.8
unitig_22.g6102 Utricularia gibba HOM05D006686 ORTHO05D008463 1.4e-172 610.1 482 63.5
Lalb_Chr07g0176791 Lupinus albus HOM05D006686 ORTHO05D008463 4.1e-172 608.6 433 69.3
RcHm_v2.0_Chr7g0220181 Rosa chinensis HOM05D006686 ORTHO05D008463 5.3e-172 608.2 366 77.3
Sp6g11350 Schrenkiella parvula HOM05D006686 ORTHO05D008463 7.0e-172 607.8 473 62.8
Carub.0004s0259 Capsella rubella HOM05D006686 ORTHO05D008463 1.2e-171 607.1 455 63.1
Zm00001eb423040 Zea mays HOM05D006686 ORTHO05D008463 1.6e-171 606.7 465 63.4
AL4G13300 Arabidopsis lyrata HOM05D006686 ORTHO05D008463 5.9e-171 604.7 455 63.7
arahy.Tifrunner.gnm1.ann1.A5H9W7 Arachis hypogaea HOM05D006686 ORTHO05D008463 7.7e-171 604.4 390 73.6
BcaC01g04848 Brassica carinata HOM05D006686 ORTHO05D008463 1.0e-170 604.0 432 65.7
BolC3t15644H Brassica oleracea HOM05D006686 ORTHO05D008463 1.0e-170 604.0 432 65.7
arahy.Tifrunner.gnm1.ann1.KKPS0T Arachis hypogaea HOM05D006686 ORTHO05D003399 1.3e-170 603.6 387 74.2
C03p33220 Brassica napus HOM05D006686 ORTHO05D008463 1.7e-170 603.2 432 65.5
BcaB01g02944 Brassica carinata HOM05D006686 ORTHO05D008463 6.5e-170 601.3 476 61.3
BraA03t11965Z Brassica rapa HOM05D006686 ORTHO05D008463 8.5e-170 600.9 432 65.3
AT2G23390 Arabidopsis thaliana HOM05D006686 ORTHO05D008463 1.5e-169 600.1 455 62.2
Thhalv10013635m.g Eutrema salsugineum HOM05D006686 ORTHO05D008463 7.2e-169 597.8 429 65.3
Psat4g001080 Pisum sativum HOM05D006686 ORTHO05D008463 1.2e-168 597.0 387 71.6
Ca_13532_v3 Cicer arietinum L. HOM05D006686 ORTHO05D008463 2.1e-168 596.3 429 67.4
SEGI_40259 Sequoiadendron giganteum HOM05D006686 ORTHO05D008463 6.8e-167 591.3 413 67.6
Medtr4g134670 Medicago truncatula HOM05D006686 ORTHO05D008463 1.3e-165 587.0 390 72.3
Lj9C281G9 Lonicera japonica HOM05D006686 ORTHO05D008463 1.7e-165 586.6 468 62.8
TPR.G5968 Trifolium pratense HOM05D006686 ORTHO05D008463 2.8e-165 585.9 385 72.5
A03p27520 Brassica napus HOM05D006686 ORTHO05D008463 6.3e-165 584.7 463 60.9
Sed0016336 Sechium edule HOM05D006686 ORTHO05D008463 1.4e-164 583.6 363 74.1
Mapoly0007s0219 Marchantia polymorpha HOM05D006686 ORTHO05D008463 4.7e-160 568.5 439 61.3
Rhsim05G0116000 Rhododendron simsii HOM05D006686 ORTHO05D008463 2.8e-157 559.3 440 63.0
Cpa.g.sc113.25 Carica papaya HOM05D006686 ORTHO05D008463 3.7e-157 558.9 466 60.3
Pp3c21_14930 Physcomitrium patens HOM05D006686 ORTHO05D008463 3.7e-157 558.9 399 64.2
Aqoxy5G01865 Aquilegia oxysepala HOM05D006686 ORTHO05D008463 4.1e-156 555.4 440 61.8
AagrBONN_evm.TU.Sc2ySwM_362.840 Anthoceros agrestis HOM05D006686 ORTHO05D008463 9.2e-156 554.3 478 57.3
Atru.chr6.339 Acer truncatum HOM05D006686 ORTHO05D008463 1.2e-150 537.3 356 70.5
Ciclev10001220m.g Citrus clementina HOM05D006686 ORTHO05D008463 3.7e-149 532.3 484 56.4
CiPaw.06G176300 Carya illinoinensis HOM05D006686 ORTHO05D008463 7.3e-145 518.1 333 73.6
SMO364G0094 Selaginella moellendorffii HOM05D006686 ORTHO05D008463 2.3e-143 513.1 371 64.7
Sc03g0004960 Simmondsia chinensis HOM05D006686 ORTHO05D008463 5.2e-135 485.3 460 54.1
PSO447G0166 Papaver somniferum HOM05D006686 ORTHO05D008463 8.1e-128 461.5 433 54.7
Actinidia01629 Actinidia chinensis HOM05D006686 ORTHO05D008463 5.6e-105 385.6 320 61.9
Cre09.g399626 Chlamydomonas reinhardtii HOM05D006686 ORTHO05D008463 2.1e-99 367.1 468 42.3
Haze_09995 Corylus avellana HOM05D006686 ORTHO05D008463 9.6e-97 358.2 211 80.1
Haze_27211 Corylus avellana HOM05D006686 ORTHO05D008463 6.9e-95 352.1 384 46.6
Glyma.17G001600 Glycine max HOM05D006686 ORTHO05D008463 2.3e-90 337.0 259 68.0
RcHm_v2.0_Chr7g0220471 Rosa chinensis HOM05D006686 ORTHO05D008463 3.3e-89 333.2 220 72.7
PRCOL_00000210 Prasinoderma coloniale HOM05D006686 ORTHO05D008463 1.3e-88 331.3 484 40.1
FAN08G3117 Fragaria x ananassa HOM05D006686 ORTHO05D008463 3.4e-86 323.2 273 58.6
Oeu000154.1 Olea europaea HOM05D006686 ORTHO05D008463 7.4e-73 278.9 318 50.0
AUR62032459 Chenopodium quinoa HOM05D006686 ORTHO05D008463 5.2e-66 256.1 231 54.5
CARHR293020 Cardamine hirsuta HOM05D006686 ORTHO05D008463 2.4e-63 247.3 159 70.4
Eucgr.A00755 Eucalyptus grandis HOM05D006686 ORTHO05D008463 6.3e-56 222.6 154 68.8
Nitab4.5_0004668g0030 Nicotiana tabacum HOM05D006686 ORTHO05D008463 1.1e-39 168.7 128 60.9
Haze_09994 Corylus avellana HOM05D006686 ORTHO05D008463 9.5e-36 155.6 221 42.1
CBR_g48698 Chara braunii HOM05D006686 ORTHO05D008463 3.9e-29 133.7 123 54.5
MELO3C032221.2 Cucumis melo HOM05D006686 ORTHO05D008463 2.9e-24 117.5 81 71.6
Hund15396 Selenicereus undatus HOM05D006686 ORTHO05D008463 3.7e-24 117.1 75 73.3
CiPaw.06G176500 Carya illinoinensis HOM05D006686 ORTHO05D008463 5.4e-23 113.2 95 54.7
Actinidia26190 Actinidia chinensis HOM05D006686 ORTHO05D008463 7.0e-23 112.8 70 72.9
CBR_g48699 Chara braunii HOM05D006686 ORTHO05D008463 1.1e-18 99.0 81 55.6
Haze_05751 Corylus avellana HOM05D006686 ORTHO05D008463 1.1e-18 99.0 102 52.9
Peaxi162Scf00011g01844 Petunia axillaris HOM05D006686 ORTHO05D008463 6.4e-16 89.7 135 42.2
RcHm_v2.0_Chr7g0220191 Rosa chinensis HOM05D006686 ORTHO05D008463 3.4e-09 67.4 112 40.2


User provided reference genes

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