Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005634 Vanilla planifolia HOM05D000962 ORTHO05D000752 6.0e-65 250.8 132 100.0
HPP92_005647 Vanilla planifolia HOM05D000962 ORTHO05D000752 1.8e-40 169.5 99 93.9
HPP92_005677 Vanilla planifolia HOM05D000649 ORTHO05D000752 7.7e-28 127.5 68 100.0
Gohir.A10G158400 Gossypium hirsutum HOM05D000962 ORTHO05D000752 1.2e-09 67.0 93 48.4
Gorai.011G121400 Gossypium raimondii HOM05D000962 ORTHO05D000752 1.2e-09 67.0 93 48.4
AT5G08480 Arabidopsis thaliana HOM05D000962 ORTHO05D000752 1.6e-09 66.6 76 47.4
Ciclev10026619m.g Citrus clementina HOM05D000962 ORTHO05D000752 1.6e-09 66.6 86 41.9
Gohir.D10G110200 Gossypium hirsutum HOM05D000962 ORTHO05D000752 2.7e-09 65.9 93 47.3
CARHR204510 Cardamine hirsuta HOM05D000962 ORTHO05D000752 3.6e-09 65.5 68 50.0
Thecc.01G146900 Theobroma cacao HOM05D000962 ORTHO05D000752 4.7e-09 65.1 92 46.7
AL6G18950 Arabidopsis lyrata HOM05D000962 ORTHO05D000752 8.0e-09 64.3 68 50.0
QL10p038179 Quercus lobata HOM05D000962 ORTHO05D000752 1.4e-08 63.5 69 52.2
Duzib147G0606 Durio zibethinus HOM05D000962 ORTHO05D000752 1.8e-08 63.2 92 46.7
Thhalv10015866m.g Eutrema salsugineum HOM05D000962 ORTHO05D000752 1.8e-08 63.2 67 50.7
Sp6g34420 Schrenkiella parvula HOM05D000962 ORTHO05D000752 1.8e-08 63.2 67 50.7
Carub.0006s0740 Capsella rubella HOM05D000962 ORTHO05D000752 2.3e-08 62.8 68 47.1
MBI03_g07139_MAGBIO Magnolia biondii HOM05D000962 ORTHO05D000752 2.3e-08 62.8 98 45.9
THA.LOC104819365 Tarenaya hassleriana HOM05D000962 ORTHO05D000752 2.3e-08 62.8 84 42.9
Manes.12G081300 Manihot esculenta HOM05D000962 ORTHO05D000752 3.0e-08 62.4 72 50.0
Sabra04G0083900 Salix brachista HOM05D000962 ORTHO05D000752 3.0e-08 62.4 99 38.4
BolC3t12969H Brassica oleracea HOM05D000962 ORTHO05D000752 4.0e-08 62.0 75 45.3
TWI31G0768 Tripterygium wilfordii HOM05D000962 ORTHO05D000752 4.0e-08 62.0 85 43.5
CiPaw.16G119300 Carya illinoinensis HOM05D000962 ORTHO05D000752 5.2e-08 61.6 71 47.9
BcaB01g05592 Brassica carinata HOM05D000962 ORTHO05D000752 6.7e-08 61.2 74 45.9
TAR381G1120 Trochodendron aralioides HOM05D000962 ORTHO05D000752 6.7e-08 61.2 96 45.8
A03p03870 Brassica napus HOM05D000962 ORTHO05D000752 1.2e-07 60.5 67 49.3
C03p04380 Brassica napus HOM05D000962 ORTHO05D000752 1.2e-07 60.5 67 49.3
BraA03t09734Z Brassica rapa HOM05D000962 ORTHO05D000752 1.2e-07 60.5 67 49.3
THA.LOC104800471 Tarenaya hassleriana HOM05D000962 ORTHO05D000752 1.2e-07 60.5 84 44.0
VMungo0251G0918 Vigna mungo HOM05D000962 ORTHO05D000752 1.5e-07 60.1 97 42.3
C02p03630 Brassica napus HOM05D000962 ORTHO05D000752 2.0e-07 59.7 69 46.4
TWI79G0484 Tripterygium wilfordii HOM05D000962 ORTHO05D000752 2.0e-07 59.7 64 48.4
Aa31LG3G18060 Aethionema arabicum HOM05D000962 ORTHO05D000752 2.6e-07 59.3 71 47.9
A03p07420 Brassica napus HOM05D000487 ORTHO05D000405 2.6e-07 59.3 75 45.3
BraA03t10070Z Brassica rapa HOM05D000487 ORTHO05D000405 2.6e-07 59.3 75 45.3
Sc16g0009850 Simmondsia chinensis HOM05D000962 ORTHO05D000752 4.4e-07 58.5 66 42.4
ClCG04G002670 Citrullus lanatus HOM05D000962 ORTHO05D000752 5.7e-07 58.2 66 50.0
BraA03t10066Z Brassica rapa HOM05D000962 ORTHO05D000752 7.5e-07 57.8 67 49.3
Haze_07708 Corylus avellana HOM05D000962 ORTHO05D000752 7.5e-07 57.8 86 44.2
PSO210G0106 Papaver somniferum HOM05D000962 ORTHO05D000752 7.5e-07 57.8 98 40.8
Sed0013489 Sechium edule HOM05D000962 ORTHO05D000752 7.5e-07 57.8 65 49.2
Glyma.08G005700 Glycine max HOM05D000962 ORTHO05D000752 9.7e-07 57.4 89 40.4
PSO761G0273 Papaver somniferum HOM05D000962 ORTHO05D000752 9.7e-07 57.4 88 44.3
TPR.G12930 Trifolium pratense HOM05D000962 ORTHO05D000752 9.7e-07 57.4 84 40.5
Cfa019320 Carpinus fangiana HOM05D000962 ORTHO05D000752 1.3e-06 57.0 84 44.0
Cfa019319 Carpinus fangiana HOM05D000962 ORTHO05D000752 1.7e-06 56.6 92 41.3
Haze_07707 Corylus avellana HOM05D000962 ORTHO05D000752 2.8e-06 55.8 84 41.7
Eucgr.I00016 Eucalyptus grandis HOM05D000962 ORTHO05D000752 2.8e-06 55.8 88 42.0
Manes.11G059000 Manihot esculenta HOM05D000962 ORTHO05D000752 2.8e-06 55.8 67 43.3
CANSAT01G2095 Cannabis sativa HOM05D000962 ORTHO05D000752 3.7e-06 55.5 99 38.4
Potri.004G134200 Populus trichocarpa HOM05D000962 ORTHO05D000752 3.7e-06 55.5 93 37.6
CsaV3_4G030030 Cucumis sativus L. HOM05D000962 ORTHO05D000752 6.3e-06 54.7 84 46.4
Phvul.002G279400 Phaseolus vulgaris HOM05D000962 ORTHO05D000752 6.3e-06 54.7 71 43.7
THA.LOC104812469 Tarenaya hassleriana HOM05D000962 ORTHO05D000752 6.3e-06 54.7 71 47.9


User provided reference genes

Program Settings