Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 4.2e-136 488.0 250 100.0
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 1.6e-135 486.1 250 99.6
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 1.7e-97 359.8 250 72.0
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 7.3e-96 354.4 250 70.4
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 1.2e-95 353.6 245 71.0
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 1.2e-95 353.6 245 71.8
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 2.8e-95 352.4 245 70.6
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 8.1e-95 350.9 245 70.6
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 1.1e-94 350.5 242 69.4
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 1.4e-94 350.1 245 71.4
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 1.2e-93 347.1 245 70.2
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 1.2e-93 347.1 243 70.0
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 1.2e-93 347.1 241 71.0
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 1.5e-93 346.7 248 69.0
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 1.5e-93 346.7 245 70.6
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 2.0e-93 346.3 242 70.7
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 3.4e-93 345.5 245 70.6
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 5.8e-93 344.7 242 69.4
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 7.6e-93 344.4 242 70.7
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 2.2e-92 342.8 245 69.0
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 2.2e-92 342.8 249 67.9
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 2.9e-92 342.4 242 70.7
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 2.9e-92 342.4 242 70.2
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 2.9e-92 342.4 242 70.2
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 2.9e-92 342.4 257 67.7
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 3.8e-92 342.0 250 67.6
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 4.9e-92 341.7 242 69.0
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 8.4e-92 340.9 245 69.0
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 8.4e-92 340.9 250 67.2
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 8.4e-92 340.9 250 67.2
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 8.4e-92 340.9 242 69.8
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 1.4e-91 340.1 245 68.2
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 1.9e-91 339.7 245 71.4
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 1.9e-91 339.7 245 71.0
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 1.9e-91 339.7 242 69.0
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 2.4e-91 339.3 248 68.5
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 2.4e-91 339.3 248 68.5
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 4.1e-91 338.6 242 69.0
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 4.1e-91 338.6 245 69.0
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 5.4e-91 338.2 242 68.2
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 5.4e-91 338.2 250 66.4
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 7.1e-91 337.8 242 67.8
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 7.1e-91 337.8 244 69.7
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 9.2e-91 337.4 242 69.0
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 1.6e-90 336.7 248 67.7
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 2.1e-90 336.3 242 68.6
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 2.7e-90 335.9 242 67.4
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 3.5e-90 335.5 242 68.2
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 4.6e-90 335.1 245 67.3
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 6.0e-90 334.7 249 68.3
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 1.0e-89 334.0 242 67.4
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 1.7e-89 333.2 242 66.9
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 1.7e-89 333.2 239 67.8
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 2.3e-89 332.8 242 68.6
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 2.3e-89 332.8 247 67.2
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 3.9e-89 332.0 248 66.5
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 8.6e-89 330.9 239 69.0
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 1.1e-88 330.5 260 65.8
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 1.9e-88 329.7 239 68.2
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 1.9e-88 329.7 239 68.2
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 1.9e-88 329.7 250 66.8
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 2.5e-88 329.3 245 67.8
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 3.3e-88 328.9 242 67.4
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 3.3e-88 328.9 242 66.1
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 4.3e-88 328.6 242 67.4
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 5.6e-88 328.2 252 65.5
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 7.3e-88 327.8 245 67.8
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 9.6e-88 327.4 242 66.5
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 9.6e-88 327.4 242 66.5
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 1.2e-87 327.0 242 66.1
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 1.2e-87 327.0 242 66.1
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 1.2e-87 327.0 242 66.1
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 3.6e-87 325.5 242 67.8
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 1.1e-86 323.9 242 66.1
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 1.8e-86 323.2 242 65.7
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 3.1e-86 322.4 242 66.5
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 1.5e-85 320.1 245 64.1
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 2.6e-85 319.3 246 65.9
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 1.7e-84 316.6 234 67.1
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 1.2e-82 310.5 242 63.2
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 1.6e-82 310.1 208 73.1
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 2.1e-82 309.7 245 64.5
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 1.0e-81 307.4 209 73.2
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 3.0e-81 305.8 245 64.5
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 6.6e-81 304.7 203 73.9
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 9.6e-80 300.8 217 70.0
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 1.2e-77 293.9 248 61.3
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 3.4e-77 292.4 250 59.2
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 3.4e-77 292.4 213 68.5
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 8.4e-76 287.7 184 77.7
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 1.0e-73 280.8 248 58.9
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 3.6e-71 272.3 198 65.2
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 2.4e-70 269.6 202 67.3
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 4.0e-70 268.9 246 57.3
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 2.4e-67 259.6 266 57.9
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 4.6e-66 255.4 245 56.3
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 1.3e-65 253.8 247 55.1
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 5.1e-65 251.9 234 52.1
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 4.0e-62 242.3 190 61.1
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 4.5e-61 238.8 231 52.8
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 1.0e-60 237.7 239 50.6
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 1.7e-60 236.9 239 54.4
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 2.1e-58 229.9 230 50.4
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 1.1e-48 197.6 202 55.9
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 3.1e-46 189.5 153 61.4
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 1.5e-45 187.2 150 64.0
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 1.7e-44 183.7 150 62.7
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 2.9e-44 183.0 158 60.8
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 2.5e-43 179.9 117 76.1
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 2.1e-42 176.8 127 71.7
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 2.7e-42 176.4 116 71.6
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 1.0e-36 157.9 151 52.3
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 8.8e-33 144.8 119 62.2
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 3.7e-31 139.4 229 38.9
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 9.1e-30 134.8 90 71.1
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 7.2e-27 125.2 92 67.4
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 5.0e-20 102.4 89 57.3
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 5.0e-20 102.4 71 70.4
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 1.3e-12 77.8 158 39.2
PRCOL_00006256 Prasinoderma coloniale HOM05D006537 ORTHO05D008186 2.3e-12 77.0 225 25.8
Sopen06g005930 Solanum pennellii HOM05D006537 ORTHO05D008186 5.4e-06 55.8 38 68.4


User provided reference genes

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