Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005532 Vanilla planifolia HOM05D003500 ORTHO05D003919 3.2e-145 518.5 277 100.0
Gohir.D07G028000 Gossypium hirsutum HOM05D003500 ORTHO05D003919 1.6e-19 100.9 284 31.0
THA.LOC104818564 Tarenaya hassleriana HOM05D003500 ORTHO05D003919 1.6e-19 100.9 286 32.2
Gohir.A07G024400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 2.3e-18 97.1 285 30.9
AL7G19060 Arabidopsis lyrata HOM05D003500 ORTHO05D003919 5.2e-18 95.9 288 29.9
Cfa013328 Carpinus fangiana HOM05D003500 ORTHO05D003919 1.2e-17 94.7 300 31.0
Thecc.09G037900 Theobroma cacao HOM05D003500 ORTHO05D003919 1.2e-17 94.7 288 33.0
QL12p026085 Quercus lobata HOM05D003500 ORTHO05D003919 2.0e-17 94.0 284 32.0
BcaC01g01007 Brassica carinata HOM05D003500 ORTHO05D003919 2.6e-17 93.6 280 30.7
Rhsim07G0154900 Rhododendron simsii HOM05D003500 ORTHO05D003919 2.6e-17 93.6 295 29.2
RcHm_v2.0_Chr6g0305551 Rosa chinensis HOM05D003500 ORTHO05D003919 1.3e-16 91.3 273 31.1
AT4G32680 Arabidopsis thaliana HOM05D003500 ORTHO05D003919 2.2e-16 90.5 290 29.0
Gorai.001G029300 Gossypium raimondii HOM05D003500 ORTHO05D003919 2.2e-16 90.5 275 28.4
Actinidia14650 Actinidia chinensis HOM05D003500 ORTHO05D003919 3.7e-16 89.7 290 28.6
BcaB03g12755 Brassica carinata HOM05D003500 ORTHO05D003919 3.7e-16 89.7 291 30.2
TAR624G1157 Trochodendron aralioides HOM05D003500 ORTHO05D003919 3.7e-16 89.7 289 30.1
Duzib168G0612 Durio zibethinus HOM05D003500 ORTHO05D003919 4.9e-16 89.4 280 31.4
Sp7g30440 Schrenkiella parvula HOM05D003500 ORTHO05D003919 4.9e-16 89.4 296 32.1
CiPaw.07G208500 Carya illinoinensis HOM05D003500 ORTHO05D003919 6.3e-16 89.0 294 28.2
A01p05660 Brassica napus HOM05D003500 ORTHO05D003919 1.1e-15 88.2 296 30.7
C03p87180 Brassica napus HOM05D003500 ORTHO05D003919 1.4e-15 87.8 283 30.7
BolC3t21020H Brassica oleracea HOM05D003500 ORTHO05D003919 1.4e-15 87.8 283 30.7
Carub.0007s0785 Capsella rubella HOM05D003500 ORTHO05D003919 1.4e-15 87.8 290 28.3
Sabra18G0036300 Salix brachista HOM05D003500 ORTHO05D003919 1.4e-15 87.8 282 29.1
BcaC09g52062 Brassica carinata HOM05D003500 ORTHO05D003919 2.4e-15 87.0 293 31.1
BolC1t00621H Brassica oleracea HOM05D003500 ORTHO05D003919 2.4e-15 87.0 285 31.2
Thhalv10025931m.g Eutrema salsugineum HOM05D003500 ORTHO05D003919 2.4e-15 87.0 299 28.4
CARHR240660 Cardamine hirsuta HOM05D003500 ORTHO05D003919 3.1e-15 86.7 277 30.7
Haze_21819 Corylus avellana HOM05D003500 ORTHO05D003919 3.1e-15 86.7 302 30.1
MD17G1194800 Malus domestica HOM05D003500 ORTHO05D003919 7.0e-15 85.5 276 27.2
FAN20G2191 Fragaria x ananassa HOM05D003500 ORTHO05D003919 9.2e-15 85.1 273 28.9
Prupe.3G070800 Prunus persica HOM05D003500 ORTHO05D003919 9.2e-15 85.1 278 28.8
Aa31LG2G16940 Aethionema arabicum HOM05D003500 ORTHO05D003919 1.2e-14 84.7 285 30.9
BraA08t33760Z Brassica rapa HOM05D003500 ORTHO05D003919 1.2e-14 84.7 297 30.3
SGA_v2.0_scaffold169G38640 Striga asiatica HOM05D003500 ORTHO05D003919 1.2e-14 84.7 276 28.3
BraA01t00536Z Brassica rapa HOM05D003500 ORTHO05D003919 1.6e-14 84.3 283 31.1
CSS0048332 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 2.0e-14 84.0 130 40.8
Potri.018G035800 Populus trichocarpa HOM05D003500 ORTHO05D003919 2.7e-14 83.6 287 29.6
CANSAT35G1218 Cannabis sativa HOM05D003500 ORTHO05D003919 4.5e-14 82.8 305 29.5
MELO3C011162.2 Cucumis melo HOM05D003500 ORTHO05D003919 4.5e-14 82.8 288 28.8
Eucgr.C02880 Eucalyptus grandis HOM05D003500 ORTHO05D003919 5.9e-14 82.4 291 29.9
Actinidia15719 Actinidia chinensis HOM05D003500 ORTHO05D003919 1.0e-13 81.6 288 28.1
ClCG08G012430 Citrullus lanatus HOM05D003500 ORTHO05D003919 1.3e-13 81.3 287 29.6
RcHm_v2.0_Chr2g0137891 Rosa chinensis HOM05D003500 ORTHO05D003919 1.3e-13 81.3 276 29.3
CsaV3_2G031120 Cucumis sativus L. HOM05D003500 ORTHO05D003919 1.7e-13 80.9 288 29.2
Aqoxy7G01735 Aquilegia oxysepala HOM05D003500 ORTHO05D003919 2.3e-13 80.5 129 40.3
Ciclev10009124m.g Citrus clementina HOM05D003500 ORTHO05D003919 2.3e-13 80.5 279 28.0
Duzib187G1538 Durio zibethinus HOM05D003500 ORTHO05D003919 2.9e-13 80.1 282 30.1
Manes.16G069800 Manihot esculenta HOM05D003500 ORTHO05D003919 2.9e-13 80.1 279 29.4
Dinv14210 Davidia involucrata HOM05D003500 ORTHO05D003919 1.5e-12 77.8 294 27.2
FvH4_2g36330 Fragaria vesca HOM05D003500 ORTHO05D003919 1.5e-12 77.8 273 29.3
arahy.Tifrunner.gnm1.ann1.V41S3G Arachis hypogaea HOM05D003500 ORTHO05D003919 1.9e-12 77.4 286 30.8
Lj8A606T22 Lonicera japonica HOM05D003500 ORTHO05D003919 1.9e-12 77.4 282 27.0
Sc09g0008940 Simmondsia chinensis HOM05D003500 ORTHO05D003919 1.9e-12 77.4 277 29.2
FAN27G2449 Fragaria x ananassa HOM05D003500 ORTHO05D003919 2.5e-12 77.0 273 28.6
MBI11_g07535_MAGBIO Magnolia biondii HOM05D003500 ORTHO05D003919 2.5e-12 77.0 274 29.2
ECA248G2427 Erigeron canadensis HOM05D002222 ORTHO05D002354 4.3e-12 76.3 293 26.6
SalBow2G3431 Salvia bowleyana HOM05D003500 ORTHO05D003919 5.6e-12 75.9 283 29.3
Lalb_Chr03g0029341 Lupinus albus HOM05D003500 ORTHO05D003919 1.6e-11 74.3 285 28.4
Dinv30507 Davidia involucrata HOM05D003500 ORTHO05D003919 2.1e-11 73.9 130 35.4
AL7G19270 Arabidopsis lyrata HOM05D002156 ORTHO05D003919 2.8e-11 73.6 215 32.1
Migut.I00867 Erythranthe guttata HOM05D003500 ORTHO05D003919 2.8e-11 73.6 271 28.0
Cfa002069 Carpinus fangiana HOM05D003500 ORTHO05D003919 3.6e-11 73.2 279 28.0
Migut.D01030 Erythranthe guttata HOM05D003500 ORTHO05D003919 3.6e-11 73.2 276 29.3
FvH4_6g31220 Fragaria vesca HOM05D003500 ORTHO05D003919 3.6e-11 73.2 278 27.7
PGR044G1892 Punica granatum HOM05D003500 ORTHO05D003919 3.6e-11 73.2 274 27.0
TPR.G21779 Trifolium pratense HOM05D003500 ORTHO05D003919 3.6e-11 73.2 271 28.0
TPR.G31013 Trifolium pratense HOM05D003500 ORTHO05D003919 4.7e-11 72.8 271 26.6
DCAR_003060 Daucus carota HOM05D003500 ORTHO05D003919 6.1e-11 72.4 276 26.4
Hma1.2p1_0140F.1_g063720 Hydrangea macrophylla HOM05D003500 ORTHO05D003919 6.1e-11 72.4 298 25.8
Medtr6g007370 Medicago truncatula HOM05D003500 ORTHO05D003919 6.1e-11 72.4 274 26.6
Medtr7g446310 Medicago truncatula HOM05D003500 ORTHO05D003919 6.1e-11 72.4 274 26.6
Oeu014656.1 Olea europaea HOM05D003500 ORTHO05D003919 6.1e-11 72.4 157 34.4
Potri.003G055200 Populus trichocarpa HOM05D003500 ORTHO05D003919 6.1e-11 72.4 279 25.8
A08p18080 Brassica napus HOM05D003500 ORTHO05D003919 8.0e-11 72.0 126 36.5
Dinv30238 Davidia involucrata HOM05D003500 ORTHO05D003919 8.0e-11 72.0 279 25.4
Thecc.06G088400 Theobroma cacao HOM05D003500 ORTHO05D003919 8.0e-11 72.0 291 29.6
GSVIVG01035753001 Vitis vinifera HOM05D003500 ORTHO05D003919 8.0e-11 72.0 303 26.7
Atru.chr7.2303 Acer truncatum HOM05D003500 ORTHO05D003919 1.0e-10 71.6 316 26.9
Sopen08g021950 Solanum pennellii HOM05D003500 ORTHO05D003919 1.0e-10 71.6 284 26.1
HanXRQChr01g0029371 Helianthus annuus HOM05D003500 ORTHO05D003919 1.4e-10 71.2 271 26.6
arahy.Tifrunner.gnm1.ann1.HR3BJH Arachis hypogaea HOM05D003500 ORTHO05D003919 1.8e-10 70.9 289 30.1
Prupe.1G454700 Prunus persica HOM05D003500 ORTHO05D003919 1.8e-10 70.9 282 28.0
Sc12g0009290 Simmondsia chinensis HOM05D003500 ORTHO05D003919 1.8e-10 70.9 290 27.6
Solyc08g068060.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 1.8e-10 70.9 282 26.2
Migut.E01507 Erythranthe guttata HOM05D003500 ORTHO05D003919 2.3e-10 70.5 272 28.3
FAN14G5419 Fragaria x ananassa HOM05D003500 ORTHO05D003919 2.3e-10 70.5 276 27.2
Nitab4.5_0002393g0050 Nicotiana tabacum HOM05D003500 ORTHO05D003919 2.3e-10 70.5 285 26.3
Peaxi162Scf00015g10038 Petunia axillaris HOM05D003500 ORTHO05D003919 2.3e-10 70.5 133 33.1
CiPaw.01G239100 Carya illinoinensis HOM05D003500 ORTHO05D003919 3.0e-10 70.1 130 34.6
CAN.G886.10 Capsicum annuum HOM05D003500 ORTHO05D003919 4.0e-10 69.7 304 25.0
vmacro05351 Vaccinium macrocarpon HOM05D003500 ORTHO05D003919 5.2e-10 69.3 278 27.7
Haze_16428 Corylus avellana HOM05D003500 ORTHO05D003919 6.8e-10 68.9 294 26.5
Zm00001eb366780 Zea mays HOM05D039918 ORTHO05D003919 6.8e-10 68.9 336 26.2
MSTRG.4733 Avicennia marina HOM05D003500 ORTHO05D003919 8.9e-10 68.6 281 27.4
Os01g0863400 Oryza sativa ssp. japonica HOM05D003500 ORTHO05D003919 1.2e-09 68.2 306 25.2
TAR636G0685 Trochodendron aralioides HOM05D003500 ORTHO05D003919 1.2e-09 68.2 268 28.7
Ca_26668_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 2.0e-09 67.4 274 26.3
Solyc03g120180.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 2.0e-09 67.4 129 33.3
C01p06230 Brassica napus HOM05D003500 ORTHO05D003919 2.6e-09 67.0 126 35.7
Duzib235G1266 Durio zibethinus HOM05D003500 ORTHO05D003919 2.6e-09 67.0 157 31.8
Oeu000451.1 Olea europaea HOM05D003500 ORTHO05D003919 2.6e-09 67.0 289 27.3
PGSC0003DMG400014491 Solanum tuberosum HOM05D003500 ORTHO05D003919 2.6e-09 67.0 283 24.7
A06p01860 Brassica napus HOM05D003500 ORTHO05D003919 3.4e-09 66.6 279 24.4
Nitab4.5_0005851g0060 Nicotiana tabacum HOM05D003500 ORTHO05D003919 3.4e-09 66.6 129 32.6
PGR102G2146 Punica granatum HOM05D003500 ORTHO05D003919 3.4e-09 66.6 277 26.4
MSTRG.14007 Avicennia marina HOM05D003500 ORTHO05D003919 4.4e-09 66.2 285 29.1
Lsat_1_v5_gn_1_49081 Lactuca sativa HOM05D003500 ORTHO05D003919 4.4e-09 66.2 277 28.2
CANSAT56G2888 Cannabis sativa HOM05D003500 ORTHO05D003919 7.5e-09 65.5 135 32.6
Nitab4.5_0000671g0100 Nicotiana tabacum HOM05D003500 ORTHO05D003919 7.5e-09 65.5 129 32.6
Medtr4g012520 Medicago truncatula HOM05D003500 ORTHO05D003919 9.8e-09 65.1 291 24.7
BraA06t23403Z Brassica rapa HOM05D003500 ORTHO05D003919 1.3e-08 64.7 276 26.4
AUR62024822 Chenopodium quinoa HOM05D003500 ORTHO05D003919 1.3e-08 64.7 282 26.2
AUR62032393 Chenopodium quinoa HOM05D003500 ORTHO05D003919 1.3e-08 64.7 277 25.3
MD15G1099900 Malus domestica HOM05D003500 ORTHO05D003919 1.3e-08 64.7 296 25.7
VMungo0331G1412 Vigna mungo HOM05D003500 ORTHO05D003919 1.3e-08 64.7 309 26.9
BolC6t35867H Brassica oleracea HOM05D003500 ORTHO05D003919 1.7e-08 64.3 278 27.0
TWI32G0121 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 1.7e-08 64.3 291 26.1
Psat7g252240 Pisum sativum HOM05D003500 ORTHO05D003919 2.2e-08 63.9 286 24.8
C06p07810 Brassica napus HOM05D003500 ORTHO05D003919 2.9e-08 63.5 278 27.0
Eucgr.F03015 Eucalyptus grandis HOM05D003500 ORTHO05D003919 3.7e-08 63.2 274 27.4
Psat7g063400 Pisum sativum HOM05D003500 ORTHO05D003919 3.7e-08 63.2 284 26.1
VMungo1127G1234 Vigna mungo HOM05D003500 ORTHO05D003919 3.7e-08 63.2 281 27.0
EL10Ac2g02525 Beta vulgaris HOM05D003500 ORTHO05D003919 4.9e-08 62.8 281 27.4
Thhalv10012010m.g Eutrema salsugineum HOM05D003500 ORTHO05D003919 4.9e-08 62.8 270 27.4
Phvul.011G117800 Phaseolus vulgaris HOM05D003500 ORTHO05D003919 4.9e-08 62.8 276 26.4
TWI18G0570 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 4.9e-08 62.8 281 26.0
Carub.0001s4135 Capsella rubella HOM05D003500 ORTHO05D003919 6.4e-08 62.4 274 24.8
Glyma.12G113900 Glycine max HOM05D003500 ORTHO05D003919 8.3e-08 62.0 274 25.9
Lj3g0003659 Lotus japonicus HOM05D003500 ORTHO05D003919 8.3e-08 62.0 279 26.2
Ah.10g025530 Amaranthus hybridus HOM05D003500 ORTHO05D003919 1.1e-07 61.6 278 26.3
Ciclev10027012m.g Citrus clementina HOM05D003500 ORTHO05D003919 1.8e-07 60.8 280 28.2
PSO782G3147 Papaver somniferum HOM05D003500 ORTHO05D003919 1.8e-07 60.8 340 24.7
SGA_v2.0_scaffold37G14827 Striga asiatica HOM05D003500 ORTHO05D003919 1.8e-07 60.8 284 25.4
Lj3g0021763 Lotus japonicus HOM05D003500 ORTHO05D003919 2.4e-07 60.5 291 26.1
QL05p023510 Quercus lobata HOM05D003500 ORTHO05D003919 2.4e-07 60.5 194 27.8
Rhsim08G0221500 Rhododendron simsii HOM05D003500 ORTHO05D003919 3.2e-07 60.1 122 32.0
PSO063G0209 Papaver somniferum HOM05D003500 ORTHO05D003919 4.1e-07 59.7 338 26.0
Ca_20390_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 5.4e-07 59.3 269 25.3
THA.LOC104810618 Tarenaya hassleriana HOM05D003500 ORTHO05D003919 9.2e-07 58.5 276 25.0
vmacro18911 Vaccinium macrocarpon HOM05D003500 ORTHO05D003919 9.2e-07 58.5 311 25.1
CARHR042490 Cardamine hirsuta HOM05D003500 ORTHO05D003919 1.2e-06 58.2 279 25.8
Sed0000644 Sechium edule HOM05D003500 ORTHO05D003919 1.6e-06 57.8 172 30.8
COL.COLO4_30382 Corchorus olitorius HOM05D003500 ORTHO05D003919 2.0e-06 57.4 133 32.3
HanXRQChr02g0053631 Helianthus annuus HOM05D003500 ORTHO05D003919 2.0e-06 57.4 190 30.5
ATR0051G010 Amborella trichopoda HOM05D003500 ORTHO05D003919 2.7e-06 57.0 152 30.9
BcaB02g11002 Brassica carinata HOM05D003500 ORTHO05D003919 7.8e-06 55.5 131 29.0


User provided reference genes

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