Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 2.5e-174 615.5 359 100.0
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 1.0e-138 497.3 355 70.7
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 1.3e-138 496.9 355 71.0
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 1.7e-138 496.5 269 87.4
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 2.2e-138 496.1 359 69.6
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 3.8e-138 495.4 271 87.1
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 1.1e-137 493.8 270 87.0
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.4e-137 493.4 269 87.0
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.9e-137 493.0 269 87.0
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 2.5e-137 492.7 269 87.0
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 5.5e-137 491.5 271 85.2
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 7.2e-137 491.1 344 74.1
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 1.2e-136 490.3 344 75.0
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 1.2e-136 490.3 269 86.6
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 1.6e-136 490.0 269 86.2
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 2.1e-136 489.6 269 86.2
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 3.0e-135 485.7 344 76.5
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 3.0e-135 485.7 341 70.1
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 3.9e-135 485.3 344 73.8
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 6.7e-135 484.6 349 70.5
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 8.8e-135 484.2 344 69.8
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 1.1e-134 483.8 269 85.1
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 1.1e-134 483.8 271 84.9
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 1.5e-134 483.4 269 85.1
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 2.0e-134 483.0 269 85.1
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 2.6e-134 482.6 269 84.8
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 2.6e-134 482.6 344 73.5
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 2.6e-134 482.6 269 84.4
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 2.6e-134 482.6 269 84.4
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 4.4e-134 481.9 344 73.5
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 4.4e-134 481.9 344 73.5
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 4.4e-134 481.9 349 72.2
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 7.4e-134 481.1 271 84.1
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 7.4e-134 481.1 355 71.8
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 7.4e-134 481.1 355 71.8
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 7.4e-134 481.1 271 83.8
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 9.7e-134 480.7 353 71.7
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 1.3e-133 480.3 271 84.5
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 1.3e-133 480.3 269 84.8
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 1.7e-133 479.9 341 70.1
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 1.7e-133 479.9 269 82.5
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 1.7e-133 479.9 353 72.0
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 1.7e-133 479.9 269 85.1
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 2.2e-133 479.6 344 76.2
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 2.8e-133 479.2 269 82.5
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 2.8e-133 479.2 344 68.9
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 2.8e-133 479.2 344 73.3
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 4.8e-133 478.4 344 71.2
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 4.8e-133 478.4 271 83.4
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 4.8e-133 478.4 343 72.9
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 6.3e-133 478.0 344 73.3
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 6.3e-133 478.0 344 69.2
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 8.2e-133 477.6 271 83.4
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 1.1e-132 477.2 354 72.6
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 1.1e-132 477.2 344 75.6
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.1e-132 477.2 344 73.0
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 1.1e-132 477.2 270 84.4
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 1.1e-132 477.2 350 72.6
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 1.4e-132 476.9 353 68.3
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 2.4e-132 476.1 356 71.3
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 3.1e-132 475.7 269 84.8
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 3.1e-132 475.7 269 84.8
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 3.1e-132 475.7 269 84.8
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 3.1e-132 475.7 269 84.8
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 3.1e-132 475.7 269 84.8
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 4.1e-132 475.3 271 83.8
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 4.1e-132 475.3 269 83.6
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 5.3e-132 474.9 268 83.6
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 7.0e-132 474.6 358 71.8
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 7.0e-132 474.6 272 83.5
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 9.1e-132 474.2 269 81.4
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 1.2e-131 473.8 269 83.3
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 1.5e-131 473.4 341 69.8
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 2.0e-131 473.0 271 82.3
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 2.6e-131 472.6 265 84.2
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 2.6e-131 472.6 271 83.4
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 3.5e-131 472.2 344 67.2
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 3.5e-131 472.2 343 73.5
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 4.5e-131 471.9 265 83.8
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 4.5e-131 471.9 271 81.9
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 5.9e-131 471.5 270 83.7
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 5.9e-131 471.5 271 81.5
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 1.0e-130 470.7 343 72.6
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 1.0e-130 470.7 271 81.5
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 1.0e-130 470.7 268 82.8
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 1.3e-130 470.3 272 82.7
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 1.7e-130 469.9 269 83.3
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 1.7e-130 469.9 269 82.5
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 2.2e-130 469.5 269 83.3
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 2.2e-130 469.5 265 83.8
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 2.2e-130 469.5 271 83.4
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 2.9e-130 469.2 271 81.5
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 2.9e-130 469.2 271 82.7
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 3.8e-130 468.8 269 83.6
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 3.8e-130 468.8 350 68.0
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 6.5e-130 468.0 269 82.9
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 6.5e-130 468.0 268 84.3
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 1.4e-129 466.8 268 81.7
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 1.4e-129 466.8 271 83.0
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 1.4e-129 466.8 270 82.6
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 1.4e-129 466.8 290 79.3
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 1.9e-129 466.5 265 82.6
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 1.9e-129 466.5 350 71.1
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 3.2e-129 465.7 271 81.5
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 3.2e-129 465.7 271 80.8
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 7.2e-129 464.5 271 80.4
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 1.6e-128 463.4 271 81.5
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 2.1e-128 463.0 271 81.5
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 2.1e-128 463.0 290 77.6
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 2.7e-128 462.6 343 72.3
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 3.6e-128 462.2 271 81.2
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 3.6e-128 462.2 272 82.0
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 1.0e-127 460.7 260 83.8
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 1.0e-127 460.7 271 81.2
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 1.4e-127 460.3 271 80.8
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 5.2e-127 458.4 293 75.1
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 2.2e-125 453.0 322 74.5
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 2.4e-124 449.5 272 79.4
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 2.6e-123 446.0 263 81.0
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 7.7e-123 444.5 269 81.0
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 7.7e-123 444.5 264 79.5
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 6.5e-122 441.4 265 81.1
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 1.5e-121 440.3 236 86.0
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 1.9e-121 439.9 267 76.0
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 2.5e-121 439.5 340 66.2
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 2.1e-120 436.4 268 78.0
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 2.7e-120 436.0 241 87.1
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 1.0e-119 434.1 242 84.3
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 1.8e-119 433.3 434 56.2
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 8.8e-119 431.0 268 76.9
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 2.7e-115 419.5 271 70.5
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 1.7e-114 416.8 269 74.0
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 2.9e-114 416.0 378 60.1
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 4.7e-112 408.7 355 63.9
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 3.0e-111 406.0 271 70.1
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 2.6e-110 402.9 269 74.3
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 9.8e-110 401.0 268 69.8
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 2.4e-108 396.4 271 67.2
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 2.0e-107 393.3 346 62.4
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 3.5e-107 392.5 271 67.5
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 6.6e-106 388.3 271 66.4
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 1.5e-105 387.1 275 66.9
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 6.8e-103 378.3 368 57.6
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 1.2e-102 377.5 211 82.5
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 8.6e-98 361.3 271 66.4
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 3.1e-95 352.8 201 85.1
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 7.0e-92 341.7 268 64.9
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 4.3e-89 332.4 213 71.4
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 2.1e-88 330.1 328 54.6
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 3.9e-82 309.3 189 77.8
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 4.3e-81 305.8 270 55.6
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 2.3e-66 256.9 150 81.3
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 9.6e-65 251.5 202 66.3
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 1.2e-54 218.0 139 77.0
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 1.0e-45 188.3 273 44.3
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 3.9e-42 176.4 137 62.0
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 3.3e-33 146.7 150 53.3
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 3.1e-23 113.6 65 78.5
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 6.9e-23 112.5 252 30.2
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 9.1e-23 112.1 254 29.9
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 2.5e-20 104.0 298 28.9
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 7.2e-20 102.4 58 86.2
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 1.7e-16 91.3 59 74.6
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 2.2e-16 90.9 58 70.7
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 6.3e-16 89.4 348 25.3
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.2e-14 85.1 63 69.8
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 2.1e-11 74.3 125 34.4
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 8.0e-11 72.4 109 49.5
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 3.9e-10 70.1 35 85.7
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 1.5e-09 68.2 33 93.9
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 5.7e-09 66.2 35 82.9
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 1.4e-07 61.6 41 70.7
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 2.4e-07 60.8 41 68.3
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 3.1e-07 60.5 39 71.8


User provided reference genes

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