Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005520 Vanilla planifolia HOM05D004989 ORTHO05D006335 1.4e-209 732.6 367 100.0
TAR365G0616 Trochodendron aralioides HOM05D004989 ORTHO05D006335 1.5e-145 520.0 361 72.3
Cfa015597 Carpinus fangiana HOM05D004989 ORTHO05D006335 3.4e-142 508.8 361 70.6
Nn1g02182 Nelumbo nucifera HOM05D004989 ORTHO05D006335 5.8e-142 508.1 361 70.4
PSO017G3853 Papaver somniferum HOM05D004989 ORTHO05D006335 4.9e-141 505.0 365 70.7
MBI14_g28267_MAGBIO Magnolia biondii HOM05D004989 ORTHO05D006335 3.2e-140 502.3 352 72.7
CiPaw.02G093300 Carya illinoinensis HOM05D004989 ORTHO05D006335 2.1e-139 499.6 357 68.3
QL06p003872 Quercus lobata HOM05D004989 ORTHO05D006335 6.0e-139 498.0 374 67.1
Dinv44490 Davidia involucrata HOM05D004989 ORTHO05D006335 4.3e-137 491.9 358 70.1
GSVIVG01017902001 Vitis vinifera HOM05D004989 ORTHO05D006335 4.3e-137 491.9 367 70.0
Prupe.1G152800 Prunus persica HOM05D004989 ORTHO05D006335 5.6e-137 491.5 362 69.6
Lj6g0002948 Lotus japonicus HOM05D004989 ORTHO05D006335 1.3e-136 490.3 363 68.3
CDE07G1289 Ceratophyllum demersum HOM05D004989 ORTHO05D006335 1.6e-136 490.0 353 70.5
RcHm_v2.0_Chr4g0417841 Rosa chinensis HOM05D004989 ORTHO05D006335 3.6e-136 488.8 364 68.7
arahy.Tifrunner.gnm1.ann1.L7AGGG Arachis hypogaea HOM05D004989 ORTHO05D006335 6.2e-136 488.0 367 67.8
PSO478G2898 Papaver somniferum HOM05D004989 ORTHO05D006335 8.1e-136 487.6 314 75.8
FvH4_4g14760 Fragaria vesca HOM05D004989 ORTHO05D006335 1.1e-135 487.3 361 69.3
CSS0017868 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 1.8e-135 486.5 361 70.6
Aqoxy3G00936 Aquilegia oxysepala HOM05D004989 ORTHO05D006335 2.4e-135 486.1 357 70.6
CSS0000312 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 4.0e-135 485.3 360 69.7
Glyma.07G257800 Glycine max HOM05D004989 ORTHO05D006335 4.0e-135 485.3 362 67.4
MD16G1186000 Malus domestica HOM05D004989 ORTHO05D006335 4.0e-135 485.3 372 68.3
arahy.Tifrunner.gnm1.ann1.8A1ZYN Arachis hypogaea HOM05D004989 ORTHO05D006335 5.3e-135 485.0 367 67.6
Dinv38405 Davidia involucrata HOM05D004989 ORTHO05D006335 5.3e-135 485.0 359 70.5
Glyma.17G016200 Glycine max HOM05D004989 ORTHO05D006335 1.5e-134 483.4 366 67.8
VMungo1215G0587 Vigna mungo HOM05D004989 ORTHO05D006335 1.5e-134 483.4 364 67.6
Medtr2g022530 Medicago truncatula HOM05D004989 ORTHO05D006335 2.0e-134 483.0 364 67.0
Sed0017941 Sechium edule HOM05D004989 ORTHO05D006335 3.4e-134 482.3 356 68.5
CANSAT78G0752 Cannabis sativa HOM05D004989 ORTHO05D006335 1.3e-133 480.3 366 66.9
Ca_00634_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 2.2e-133 479.6 370 66.5
CsaV3_3G013610 Cucumis sativus L. HOM05D004989 ORTHO05D006335 2.2e-133 479.6 362 68.5
Manes.03G183100 Manihot esculenta HOM05D004989 ORTHO05D006335 3.8e-133 478.8 359 66.9
MELO3C006557.2 Cucumis melo HOM05D004989 ORTHO05D006335 6.4e-133 478.0 362 68.2
Lalb_Chr18g0056141 Lupinus albus HOM05D004989 ORTHO05D006335 4.2e-132 475.3 365 67.1
Potri.008G203600 Populus trichocarpa HOM05D004989 ORTHO05D006335 4.2e-132 475.3 352 69.0
EL10Ac3g05973 Beta vulgaris HOM05D004989 ORTHO05D006335 1.2e-131 473.8 354 66.9
Os11g0276300 Oryza sativa ssp. japonica HOM05D004989 ORTHO05D006335 1.2e-131 473.8 370 66.2
Thecc.04G224100 Theobroma cacao HOM05D004989 ORTHO05D006335 2.3e-130 469.5 358 67.3
Migut.G00301 Erythranthe guttata HOM05D004989 ORTHO05D006335 3.9e-130 468.8 362 66.9
FAN17G0130 Fragaria x ananassa HOM05D004989 ORTHO05D006335 3.9e-130 468.8 380 65.0
Gorai.005G041000 Gossypium raimondii HOM05D004989 ORTHO05D006335 5.1e-130 468.4 359 66.0
Peaxi162Scf00134g02033 Petunia axillaris HOM05D004989 ORTHO05D006335 1.5e-129 466.8 362 65.2
Cc03_g03230 Coffea canephora HOM05D004989 ORTHO05D006335 1.9e-129 466.5 371 63.9
Gohir.D02G037100 Gossypium hirsutum HOM05D004989 ORTHO05D006335 2.5e-129 466.1 359 65.7
Carub.0006s1748 Capsella rubella HOM05D004989 ORTHO05D006335 4.3e-129 465.3 361 66.8
MSTRG.4001 Avicennia marina HOM05D004989 ORTHO05D006335 1.3e-128 463.8 366 66.7
Thhalv10013830m.g Eutrema salsugineum HOM05D004989 ORTHO05D006335 1.3e-128 463.8 368 65.5
Gohir.A02G029300 Gossypium hirsutum HOM05D004989 ORTHO05D006335 1.6e-128 463.4 359 65.5
Eucgr.B01122 Eucalyptus grandis HOM05D004989 ORTHO05D006335 2.8e-128 462.6 366 65.0
Aa31LG11G10490 Aethionema arabicum HOM05D004989 ORTHO05D006335 3.7e-128 462.2 358 66.5
BolC3t13560H Brassica oleracea HOM05D004989 ORTHO05D006335 3.7e-128 462.2 361 65.9
SalBow2G0224 Salvia bowleyana HOM05D004989 ORTHO05D006335 3.7e-128 462.2 375 63.7
vmacro15315 Vaccinium macrocarpon HOM05D004989 ORTHO05D006335 3.7e-128 462.2 359 68.2
Phvul.003G091700 Phaseolus vulgaris HOM05D004989 ORTHO05D006335 4.8e-128 461.8 320 71.6
HPP92_005588 Vanilla planifolia HOM05D004989 ORTHO05D006335 1.1e-127 460.7 295 83.7
AUR62026218 Chenopodium quinoa HOM05D004989 ORTHO05D006335 1.4e-127 460.3 351 64.7
AL6G30570 Arabidopsis lyrata HOM05D004989 ORTHO05D006335 3.1e-127 459.1 361 66.2
Sp6g25210 Schrenkiella parvula HOM05D004989 ORTHO05D006335 4.0e-127 458.8 361 65.7
Zm00001eb168810 Zea mays HOM05D004989 ORTHO05D006335 5.3e-127 458.4 315 71.7
AT5G19150 Arabidopsis thaliana HOM05D004989 ORTHO05D006335 1.2e-126 457.2 361 66.5
THA.LOC104818802 Tarenaya hassleriana HOM05D004989 ORTHO05D006335 1.2e-126 457.2 361 65.4
ECA234G2869 Erigeron canadensis HOM05D004989 ORTHO05D006335 1.5e-126 456.8 321 70.1
COL.COLO4_26626 Corchorus olitorius HOM05D004989 ORTHO05D006335 3.4e-126 455.7 393 61.3
ATR0743G104 Amborella trichopoda HOM05D004989 ORTHO05D006335 5.8e-126 454.9 348 66.4
HanXRQChr12g0359311 Helianthus annuus HOM05D004989 ORTHO05D006335 7.6e-126 454.5 333 69.4
CARHR193800 Cardamine hirsuta HOM05D004989 ORTHO05D006335 1.7e-125 453.4 361 65.1
Atru.chr4.2544 Acer truncatum HOM05D004989 ORTHO05D006335 2.2e-125 453.0 314 72.6
BcaB01g05136 Brassica carinata HOM05D004989 ORTHO05D006335 2.9e-125 452.6 361 64.5
BraA03t10257Z Brassica rapa HOM05D004989 ORTHO05D006335 4.9e-125 451.8 374 62.6
RcHm_v2.0_Chr0c32g0501471 Rosa chinensis HOM05D004989 ORTHO05D006335 6.4e-125 451.4 378 62.4
Sabra08G0157900 Salix brachista HOM05D004989 ORTHO05D006335 6.4e-125 451.4 388 61.9
Sopen01g031620 Solanum pennellii HOM05D004989 ORTHO05D006335 8.4e-125 451.1 317 70.7
RcHm_v2.0_Chr0c32g0501661 Rosa chinensis HOM05D004989 ORTHO05D006335 1.4e-124 450.3 357 66.4
BcaB01g04874 Brassica carinata HOM05D004989 ORTHO05D006335 1.9e-124 449.9 359 64.1
FAN22G1009 Fragaria x ananassa HOM05D004989 ORTHO05D006335 1.9e-124 449.9 378 63.5
MSTRG.10011 Avicennia marina HOM05D004989 ORTHO05D006335 3.2e-124 449.1 333 68.5
CAN.G69.27 Capsicum annuum HOM05D004989 ORTHO05D006335 3.2e-124 449.1 317 70.3
C03p10950 Brassica napus HOM05D004989 ORTHO05D006335 5.5e-124 448.4 370 62.7
Ah.07g202120 Amaranthus hybridus HOM05D004989 ORTHO05D006335 1.2e-123 447.2 354 65.0
A03p09380 Brassica napus HOM05D004989 ORTHO05D006335 2.1e-123 446.4 351 65.2
Solyc01g079860.3 Solanum lycopersicum HOM05D004989 ORTHO05D006335 2.1e-123 446.4 317 70.3
Rhsim02G0020900 Rhododendron simsii HOM05D004989 ORTHO05D006335 7.9e-123 444.5 404 60.1
BraA02t05485Z Brassica rapa HOM05D004989 ORTHO05D006335 1.1e-121 440.7 324 67.9
Nitab4.5_0000630g0050 Nicotiana tabacum HOM05D004989 ORTHO05D006335 9.6e-121 437.6 291 73.9
TWI73G0966 Tripterygium wilfordii HOM05D004989 ORTHO05D006335 9.6e-121 437.6 368 62.8
Hund12013 Selenicereus undatus HOM05D004989 ORTHO05D006335 2.1e-120 436.4 318 68.6
BcaC03g13646 Brassica carinata HOM05D004989 ORTHO05D006335 4.8e-120 435.3 324 67.3
BolC2t06940H Brassica oleracea HOM05D004989 ORTHO05D006335 4.8e-120 435.3 324 67.3
RcHm_v2.0_Chr3g0483801 Rosa chinensis HOM05D004989 ORTHO05D006335 4.8e-120 435.3 284 75.0
BcaB05g23373 Brassica carinata HOM05D004989 ORTHO05D006335 1.4e-119 433.7 324 67.6
Haze_00947 Corylus avellana HOM05D004989 ORTHO05D006335 1.4e-119 433.7 348 64.7
PGSC0003DMG400009024 Solanum tuberosum HOM05D004989 ORTHO05D006335 6.9e-119 431.4 293 73.4
C03p10960 Brassica napus HOM05D004989 ORTHO05D006335 2.0e-118 429.9 359 62.1
Nitab4.5_0005927g0020 Nicotiana tabacum HOM05D004989 ORTHO05D006335 1.3e-117 427.2 384 59.9
A02p05270 Brassica napus HOM05D004989 ORTHO05D006335 1.7e-117 426.8 334 64.1
Oeu042787.2 Olea europaea HOM05D004989 ORTHO05D006335 8.4e-117 424.5 430 55.3
unitig_736.g22488 Utricularia gibba HOM05D004989 ORTHO05D006335 2.5e-116 422.9 359 62.4
C02p10390 Brassica napus HOM05D004989 ORTHO05D006335 9.3e-116 421.0 317 66.6
Ciclev10005119m.g Citrus clementina HOM05D004989 ORTHO05D006335 1.2e-115 420.6 303 68.0
Lj6g0017812 Lotus japonicus HOM05D004989 ORTHO05D006335 2.1e-115 419.9 321 65.7
Sc13g0004100 Simmondsia chinensis HOM05D004989 ORTHO05D006335 1.8e-114 416.8 295 71.2
Actinidia36991 Actinidia chinensis HOM05D004989 ORTHO05D006335 1.5e-113 413.7 351 64.1
Psat1g182800 Pisum sativum HOM05D004989 ORTHO05D006335 4.2e-108 395.6 252 76.2
Lj6A574T37 Lonicera japonica HOM05D004989 ORTHO05D006335 6.1e-107 391.7 246 76.4
Hma1.2p1_2553F.1_g324330 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 8.7e-106 387.9 258 74.8
Mapoly0063s0079 Marchantia polymorpha HOM05D004989 ORTHO05D006335 3.6e-99 365.9 314 59.9
SMO361G0104 Selaginella moellendorffii HOM05D004989 ORTHO05D006335 4.8e-96 355.5 304 60.5
CBR_g26053 Chara braunii HOM05D004989 ORTHO05D006335 6.3e-96 355.1 331 56.5
SHI00391 Sapria himalayana HOM05D004989 ORTHO05D006335 1.2e-91 340.9 296 59.1
C03p10910 Brassica napus HOM05D004989 ORTHO05D006335 2.7e-91 339.7 261 65.1
ClCG05G005360 Citrullus lanatus HOM05D004989 ORTHO05D006335 1.8e-90 337.0 245 69.4
C03p10860 Brassica napus HOM05D004989 ORTHO05D006335 3.3e-89 332.8 356 52.2
BcaB01g05294 Brassica carinata HOM05D004989 ORTHO05D006335 5.9e-86 322.0 368 50.5
PGR142G2933 Punica granatum HOM05D004989 ORTHO05D006335 6.5e-85 318.5 359 49.3
AagrBONN_evm.TU.Sc2ySwM_344.1251 Anthoceros agrestis HOM05D004989 ORTHO05D006335 8.5e-85 318.2 318 53.8
Duzib151G0886 Durio zibethinus HOM05D004989 ORTHO05D006335 3.2e-84 316.2 362 51.1
SGA_v2.0_scaffold39G15320 Striga asiatica HOM05D004989 ORTHO05D006335 8.8e-82 308.1 196 74.5
Pp3c8_1650 Physcomitrium patens HOM05D004989 ORTHO05D006335 4.1e-79 299.3 284 56.0
arahy.Tifrunner.gnm1.ann1.BS3LH0 Arachis hypogaea HOM05D004989 ORTHO05D006335 1.2e-75 287.7 367 46.3
Hma1.2p1_2553F.1_g324320 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 4.4e-73 279.3 199 70.9
FAN07G2774 Fragaria x ananassa HOM05D004989 ORTHO05D006335 9.8e-73 278.1 267 56.2
Cre06.g250500 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 6.3e-72 275.4 335 43.9
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 1.8e-71 273.9 175 76.6
arahy.Tifrunner.gnm1.ann1.J5ZRE9 Arachis hypogaea HOM05D004989 ORTHO05D006335 1.0e-61 241.5 194 62.9
Ca_00654_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 1.9e-60 237.3 198 63.6
MCO05G313 Micromonas commoda HOM05D004989 ORTHO05D006335 3.3e-60 236.5 333 40.8
arahy.Tifrunner.gnm1.ann1.HR1U72 Arachis hypogaea HOM05D004989 ORTHO05D006335 4.7e-59 232.6 193 62.2
TPR.G30683 Trifolium pratense HOM05D004989 ORTHO05D006335 2.2e-56 223.8 165 67.3
SEGI_35556 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 4.9e-56 222.6 203 59.6
Cpa.g.sc147.7 Carica papaya HOM05D004989 ORTHO05D006335 7.0e-55 218.8 167 67.7
PRCOL_00001617 Prasinoderma coloniale HOM05D004989 ORTHO05D006335 3.5e-54 216.5 357 38.1
Hma1.2p1_0995F.1_g245810 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 7.8e-54 215.3 166 66.9
Cfa024379 Carpinus fangiana HOM05D004989 ORTHO05D006335 2.1e-51 207.2 286 39.2
SEGI_07547 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 1.1e-50 204.9 171 64.3
SEGI_27897 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 1.4e-50 204.5 124 80.6
Haze_26760 Corylus avellana HOM05D004980 ORTHO05D006505 1.0e-45 188.3 270 40.0
Atru.chr4.2545 Acer truncatum HOM05D004989 ORTHO05D006335 1.6e-43 181.0 149 61.1
Hund03167 Selenicereus undatus HOM05D004989 ORTHO05D006335 3.6e-43 179.9 114 73.7
Cre05.g234664 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 2.3e-42 177.2 365 34.5
SEGI_12399 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 4.7e-35 152.9 129 62.8
Atru.chr4.2547 Acer truncatum HOM05D004989 ORTHO05D000586 7.6e-33 145.6 109 64.2
Cfa015379 Carpinus fangiana HOM05D000407 ORTHO05D002981 2.2e-32 144.1 158 51.3
Cpa.g.sc147.5 Carica papaya HOM05D004989 ORTHO05D006335 2.4e-23 114.0 121 54.5
TPR.G30666 Trifolium pratense HOM05D004989 ORTHO05D006335 4.6e-22 109.8 87 64.4
Actinidia08511 Actinidia chinensis HOM05D004989 ORTHO05D006335 3.0e-21 107.1 320 30.6
Cpa.g.sc147.6 Carica papaya HOM05D004989 ORTHO05D006335 6.6e-21 105.9 70 67.1
CBR_g19747 Chara braunii HOM05D000409 ORTHO05D000184 9.0e-18 95.5 77 61.0
AUR62026378 Chenopodium quinoa HOM05D004989 ORTHO05D006335 4.2e-15 86.7 71 57.7
FAN07G1160 Fragaria x ananassa HOM05D004989 ORTHO05D006335 6.0e-06 56.2 42 66.7


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