Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005498 Vanilla planifolia HOM05D003238 ORTHO05D003571 2.2e-34 148.7 92 100.0
HPP92_007657 Vanilla planifolia HOM05D003238 ORTHO05D003571 3.4e-14 81.6 87 66.7
TAR624G1148 Trochodendron aralioides HOM05D003238 ORTHO05D003571 5.4e-12 74.3 53 67.9
Nn6g35523 Nelumbo nucifera HOM05D003238 ORTHO05D003571 1.2e-11 73.2 52 69.2
Dinv37898 Davidia involucrata HOM05D003238 ORTHO05D003571 1.3e-10 69.7 52 65.4
COL.COLO4_30681 Corchorus olitorius HOM05D003238 ORTHO05D003571 1.7e-10 69.3 73 71.2
Sed0010916 Sechium edule HOM05D003238 ORTHO05D003571 1.7e-10 69.3 82 46.3
QL05p009982 Quercus lobata HOM05D003238 ORTHO05D003571 2.3e-10 68.9 86 60.5
Actinidia39103 Actinidia chinensis HOM05D003238 ORTHO05D003571 2.9e-10 68.6 52 65.4
MBI04_g36912_MAGBIO Magnolia biondii HOM05D003238 ORTHO05D003571 3.8e-10 68.2 76 63.2
Cfa003563 Carpinus fangiana HOM05D003238 ORTHO05D003571 6.6e-10 67.4 51 64.7
Rhsim08G0235200 Rhododendron simsii HOM05D003238 ORTHO05D003571 6.6e-10 67.4 52 65.4
Sed0015805 Sechium edule HOM05D003238 ORTHO05D003571 6.6e-10 67.4 79 65.8
CSS0012761 Camellia sinensis var. sinensis HOM05D003238 ORTHO05D003571 8.6e-10 67.0 50 66.0
CSS0032672 Camellia sinensis var. sinensis HOM05D003238 ORTHO05D003571 8.6e-10 67.0 50 66.0
CsaV3_7G034700 Cucumis sativus L. HOM05D003238 ORTHO05D003571 8.6e-10 67.0 79 64.6
Nitab4.5_0000255g0290 Nicotiana tabacum HOM05D003238 ORTHO05D003571 8.6e-10 67.0 47 68.1
Actinidia39710 Actinidia chinensis HOM05D003238 ORTHO05D003571 1.1e-09 66.6 54 61.1
Nitab4.5_0005918g0030 Nicotiana tabacum HOM05D003238 ORTHO05D003571 1.1e-09 66.6 46 69.6
Actinidia25242 Actinidia chinensis HOM05D003238 ORTHO05D003571 1.5e-09 66.2 50 68.0
MELO3C024380.2 Cucumis melo HOM05D003238 ORTHO05D003571 1.5e-09 66.2 77 66.2
Rhsim05G0017200 Rhododendron simsii HOM05D003238 ORTHO05D003571 1.5e-09 66.2 54 57.4
Haze_15983 Corylus avellana HOM05D003238 ORTHO05D003571 1.9e-09 65.9 48 66.7
vmacro17137 Vaccinium macrocarpon HOM05D003238 ORTHO05D003571 1.9e-09 65.9 80 61.2
Gohir.A10G058000 Gossypium hirsutum HOM05D003238 ORTHO05D003571 2.5e-09 65.5 73 68.5
Nitab4.5_0006462g0010 Nicotiana tabacum HOM05D003238 ORTHO05D003571 2.5e-09 65.5 48 62.5
Oeu004201.1 Olea europaea HOM05D003238 ORTHO05D003571 2.5e-09 65.5 74 48.6
Duzib160G0096 Durio zibethinus HOM05D003238 ORTHO05D003571 3.3e-09 65.1 51 62.7
Gohir.D10G059800 Gossypium hirsutum HOM05D003238 ORTHO05D003571 3.3e-09 65.1 73 68.5
Gorai.011G063800 Gossypium raimondii HOM05D003238 ORTHO05D003571 3.3e-09 65.1 73 68.5
TWI32G0644 Tripterygium wilfordii HOM05D003238 ORTHO05D003571 3.3e-09 65.1 51 62.7
Cpa.g.sc25.72 Carica papaya HOM05D003238 ORTHO05D003571 4.3e-09 64.7 46 67.4
Cc00_g10140 Coffea canephora HOM05D001135 ORTHO05D001005 4.3e-09 64.7 54 57.4
Oeu017609.1 Olea europaea HOM05D003238 ORTHO05D003571 4.3e-09 64.7 49 63.3
CiPaw.01G223100 Carya illinoinensis HOM05D003238 ORTHO05D003571 5.6e-09 64.3 51 62.7
Dinv36782 Davidia involucrata HOM05D003238 ORTHO05D003571 5.6e-09 64.3 51 64.7
Potri.006G148000 Populus trichocarpa HOM05D003238 ORTHO05D003571 9.5e-09 63.5 56 58.9
Haze_25933 Corylus avellana HOM05D003238 ORTHO05D003571 1.2e-08 63.2 50 62.0
DCAR_026391 Daucus carota HOM05D003238 ORTHO05D003571 1.2e-08 63.2 49 61.2
ClCG09G000780 Citrullus lanatus HOM05D003238 ORTHO05D003571 1.6e-08 62.8 50 60.0
Atru.chr1.3787 Acer truncatum HOM05D003238 ORTHO05D003571 2.1e-08 62.4 78 64.1
Thecc.06G114200 Theobroma cacao HOM05D003238 ORTHO05D003571 2.1e-08 62.4 46 63.0
Cfa003064 Carpinus fangiana HOM05D003238 ORTHO05D003571 2.8e-08 62.0 50 60.0
Nitab4.5_0002824g0070 Nicotiana tabacum HOM05D003238 ORTHO05D003571 2.8e-08 62.0 51 60.8
Peaxi162Scf00498g00436 Petunia axillaris HOM05D003238 ORTHO05D003571 2.8e-08 62.0 46 67.4
PGR102G1556 Punica granatum HOM05D003238 ORTHO05D003571 2.8e-08 62.0 50 60.0
AT1G72690 Arabidopsis thaliana HOM05D003238 ORTHO05D003571 3.6e-08 61.6 56 60.7
Potri.017G119600 Populus trichocarpa HOM05D003238 ORTHO05D003571 4.7e-08 61.2 48 64.6
Sabra06G0117100 Salix brachista HOM05D003238 ORTHO05D003571 4.7e-08 61.2 45 68.9
Phvul.010G137200 Phaseolus vulgaris HOM05D003238 ORTHO05D003571 6.1e-08 60.8 46 63.0
Sp5g27750 Schrenkiella parvula HOM05D003238 ORTHO05D003571 8.0e-08 60.5 80 61.2
TWI79G0340 Tripterygium wilfordii HOM05D003238 ORTHO05D003571 8.0e-08 60.5 44 61.4
Hma1.2p1_0169F.1_g074900 Hydrangea macrophylla HOM05D003238 ORTHO05D003571 1.0e-07 60.1 50 58.0
QL02p062228 Quercus lobata HOM05D003238 ORTHO05D003571 1.0e-07 60.1 45 64.4
Sc15g0000270 Simmondsia chinensis HOM05D003238 ORTHO05D003571 1.0e-07 60.1 73 63.0
Cc04_g01740 Coffea canephora HOM05D003238 ORTHO05D003571 1.4e-07 59.7 53 54.7
CANSAT56G1439 Cannabis sativa HOM05D003238 ORTHO05D003571 1.8e-07 59.3 50 62.0
Thhalv10019375m.g Eutrema salsugineum HOM05D003238 ORTHO05D003571 1.8e-07 59.3 53 58.5
Lj3g0007714 Lotus japonicus HOM05D003238 ORTHO05D003571 1.8e-07 59.3 51 56.9
Medtr8g017610 Medicago truncatula HOM05D003238 ORTHO05D003571 1.8e-07 59.3 50 58.0
Carub.0002s1954 Capsella rubella HOM05D003238 ORTHO05D003571 2.3e-07 58.9 53 52.8
Ca_23334_v3 Cicer arietinum L. HOM05D003238 ORTHO05D003571 2.3e-07 58.9 52 55.8
Glyma.08G191200 Glycine max HOM05D003238 ORTHO05D003571 2.3e-07 58.9 52 57.7
THA.LOC109116473 Tarenaya hassleriana HOM05D003238 ORTHO05D003571 2.3e-07 58.9 47 61.7
GSVIVG01016802001 Vitis vinifera HOM05D003238 ORTHO05D003571 2.3e-07 58.9 51 58.8
BraA10t43522Z Brassica rapa HOM05D003238 ORTHO05D003571 3.0e-07 58.5 85 40.0
AL2G32370 Arabidopsis lyrata HOM05D003238 ORTHO05D003571 4.0e-07 58.2 56 55.4
A09p28910 Brassica napus HOM05D003238 ORTHO05D003571 4.0e-07 58.2 51 60.8
C06p34720 Brassica napus HOM05D003238 ORTHO05D003571 4.0e-07 58.2 51 60.8
BraA09t38454Z Brassica rapa HOM05D003238 ORTHO05D003571 4.0e-07 58.2 51 60.8
Prupe.7G206700 Prunus persica HOM05D003238 ORTHO05D003571 4.0e-07 58.2 47 59.6
Aqoxy7G04029 Aquilegia oxysepala HOM05D003238 ORTHO05D003571 6.8e-07 57.4 48 62.5
CARHR065610 Cardamine hirsuta HOM05D003238 ORTHO05D003571 6.8e-07 57.4 49 59.2
Glyma.07G008200 Glycine max HOM05D003238 ORTHO05D003571 6.8e-07 57.4 53 54.7
ATR0789G083 Amborella trichopoda HOM05D003238 ORTHO05D003571 8.9e-07 57.0 46 58.7
Solyc12g008950.2 Solanum lycopersicum HOM05D003238 ORTHO05D003571 8.9e-07 57.0 47 59.6
vmacro23045 Vaccinium macrocarpon HOM05D003238 ORTHO05D003571 8.9e-07 57.0 46 63.0
MD15G1209800 Malus domestica HOM05D003238 ORTHO05D003571 1.2e-06 56.6 47 57.4
Psat4g187480 Pisum sativum HOM05D003238 ORTHO05D003571 1.2e-06 56.6 46 58.7
Sopen06g022220 Solanum pennellii HOM05D003238 ORTHO05D003571 1.2e-06 56.6 46 63.0
arahy.Tifrunner.gnm1.ann1.7T9QNI Arachis hypogaea HOM05D003238 ORTHO05D003571 1.5e-06 56.2 48 58.3
CDE05G2517 Ceratophyllum demersum HOM05D003238 ORTHO05D003571 1.5e-06 56.2 50 56.0
Ciclev10026836m.g Citrus clementina HOM05D003238 ORTHO05D003571 1.5e-06 56.2 48 58.3
Duzib168G0217 Durio zibethinus HOM05D003238 ORTHO05D003571 1.5e-06 56.2 49 57.1
Manes.11G024400 Manihot esculenta HOM05D003238 ORTHO05D003571 1.5e-06 56.2 50 54.0
Nitab4.5_0009992g0010 Nicotiana tabacum HOM05D003238 ORTHO05D003571 1.5e-06 56.2 50 56.0
Medtr2g039890 Medicago truncatula HOM05D003238 ORTHO05D003571 2.0e-06 55.8 52 53.8
Potri.004G095300 Populus trichocarpa HOM05D003238 ORTHO05D003571 2.0e-06 55.8 78 42.3
GSVIVG01015179001 Vitis vinifera HOM05D003238 ORTHO05D003571 2.0e-06 55.8 48 58.3
Eucgr.C00871 Eucalyptus grandis HOM05D003238 ORTHO05D003571 2.6e-06 55.5 52 50.0
VMungo0720G2789 Vigna mungo HOM05D003238 ORTHO05D003571 2.6e-06 55.5 50 52.0
MD02G1082200 Malus domestica HOM05D003238 ORTHO05D003571 3.4e-06 55.1 47 55.3
Gohir.D07G012200 Gossypium hirsutum HOM05D001717 ORTHO05D007217 4.4e-06 54.7 48 56.2
Gorai.001G012800 Gossypium raimondii HOM05D003238 ORTHO05D003571 4.4e-06 54.7 50 54.0
Sopen12g003880 Solanum pennellii HOM05D003238 ORTHO05D003571 4.4e-06 54.7 50 56.0
PGSC0003DMG400000275 Solanum tuberosum HOM05D003238 ORTHO05D003571 4.4e-06 54.7 50 56.0
CiPaw.03G213000 Carya illinoinensis HOM05D003238 ORTHO05D003571 5.7e-06 54.3 50 54.0
AUR62009849 Chenopodium quinoa HOM05D003238 ORTHO05D003571 5.7e-06 54.3 75 53.3
COL.COLO4_18181 Corchorus olitorius HOM05D003238 ORTHO05D003571 5.7e-06 54.3 46 56.5
Solyc06g062765.1 Solanum lycopersicum HOM05D003238 ORTHO05D003571 5.7e-06 54.3 45 62.2
Thecc.09G086100 Theobroma cacao HOM05D003238 ORTHO05D003571 5.7e-06 54.3 81 58.0
HanXRQChr04g0126171 Helianthus annuus HOM05D003238 ORTHO05D003571 7.5e-06 53.9 101 35.6
Lalb_Chr04g0263271 Lupinus albus HOM05D003238 ORTHO05D003571 7.5e-06 53.9 52 53.8
arahy.Tifrunner.gnm1.ann1.HS5001 Arachis hypogaea HOM05D003238 ORTHO05D003571 9.8e-06 53.5 42 61.9
Lj4C292G2 Lonicera japonica HOM05D003238 ORTHO05D003571 9.8e-06 53.5 62 50.0


User provided reference genes

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