Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005471 Vanilla planifolia HOM05D005110 ORTHO05D006074 5.7e-107 391.0 202 100.0
Duzib170G1118 Durio zibethinus HOM05D005110 ORTHO05D006074 1.4e-20 104.0 198 39.9
Hund18768 Selenicereus undatus HOM05D005110 ORTHO05D006074 6.9e-20 101.7 196 35.7
CSS0022586 Camellia sinensis var. sinensis HOM05D005110 ORTHO05D006074 2.6e-19 99.8 192 35.9
DCAR_012208 Daucus carota HOM05D005110 ORTHO05D006074 7.6e-19 98.2 203 36.9
Nn2g14215 Nelumbo nucifera HOM05D005110 ORTHO05D006074 8.4e-18 94.7 195 36.4
QL01p011992 Quercus lobata HOM05D005110 ORTHO05D006074 8.4e-18 94.7 193 35.2
Hma1.2p1_0587F.1_g184070 Hydrangea macrophylla HOM05D005110 ORTHO05D006074 1.4e-17 94.0 194 36.6
GSVIVG01036094001 Vitis vinifera HOM05D005110 ORTHO05D006074 1.9e-17 93.6 193 33.2
Rhsim01G0204600 Rhododendron simsii HOM05D005110 ORTHO05D006074 3.2e-17 92.8 196 35.2
Duzib150G1383 Durio zibethinus HOM05D005110 ORTHO05D006074 4.2e-17 92.4 201 36.8
TWI79G0870 Tripterygium wilfordii HOM05D005110 ORTHO05D006074 4.2e-17 92.4 204 38.2
MBI17_g32417_MAGBIO Magnolia biondii HOM05D005110 ORTHO05D006074 5.5e-17 92.0 207 33.8
Ciclev10029378m.g Citrus clementina HOM05D005110 ORTHO05D006074 1.2e-16 90.9 202 36.1
QL01p011978 Quercus lobata HOM05D005110 ORTHO05D006074 1.2e-16 90.9 193 34.7
Dinv42535 Davidia involucrata HOM05D005110 ORTHO05D006074 1.6e-16 90.5 193 35.8
PGR102G3267 Punica granatum HOM05D005110 ORTHO05D006074 2.7e-16 89.7 193 35.2
FAN25G3715 Fragaria x ananassa HOM05D005110 ORTHO05D006074 4.6e-16 89.0 195 35.4
Thecc.09G280200 Theobroma cacao HOM05D005110 ORTHO05D006074 6.0e-16 88.6 193 34.7
FvH4_3g25370 Fragaria vesca HOM05D005110 ORTHO05D006074 7.9e-16 88.2 195 34.9
FAN21G3897 Fragaria x ananassa HOM05D005110 ORTHO05D006074 7.9e-16 88.2 195 34.9
Medtr2g086680 Medicago truncatula HOM05D005110 ORTHO05D006074 7.9e-16 88.2 196 34.7
Manes.11G163300 Manihot esculenta HOM05D005110 ORTHO05D006074 1.3e-15 87.4 198 34.3
FAN11G1413 Fragaria x ananassa HOM05D005110 ORTHO05D006074 1.8e-15 87.0 195 34.9
Dinv22825 Davidia involucrata HOM05D005110 ORTHO05D006074 2.3e-15 86.7 193 34.2
Cpa.g.sc195.13 Carica papaya HOM05D005110 ORTHO05D006074 3.0e-15 86.3 197 36.0
CANSAT54G0919 Cannabis sativa HOM05D005110 ORTHO05D006074 3.9e-15 85.9 195 33.8
Zm00001eb242880 Zea mays HOM05D005110 ORTHO05D006074 3.9e-15 85.9 208 37.0
Aqoxy4G02728 Aquilegia oxysepala HOM05D005110 ORTHO05D006074 8.7e-15 84.7 193 35.8
Lalb_Chr01g0004911 Lupinus albus HOM05D005110 ORTHO05D006074 8.7e-15 84.7 175 33.1
Sc06g0008710 Simmondsia chinensis HOM05D005110 ORTHO05D006074 8.7e-15 84.7 202 32.2
Phvul.005G122600 Phaseolus vulgaris HOM05D005110 ORTHO05D006074 1.1e-14 84.3 192 34.4
Glyma.13G315400 Glycine max HOM05D005110 ORTHO05D006074 1.5e-14 84.0 199 35.2
Duzib168G1438 Durio zibethinus HOM05D005110 ORTHO05D006074 1.9e-14 83.6 204 33.8
Oeu002365.1 Olea europaea HOM05D005110 ORTHO05D006074 1.9e-14 83.6 192 33.9
COL.COLO4_34021 Corchorus olitorius HOM05D005110 ORTHO05D006074 2.5e-14 83.2 197 34.0
Sabra09G0012800 Salix brachista HOM05D005110 ORTHO05D006074 2.5e-14 83.2 195 36.4
ECA248G3565 Erigeron canadensis HOM05D005110 ORTHO05D006074 3.3e-14 82.8 202 33.2
Prupe.6G134300 Prunus persica HOM05D005110 ORTHO05D006074 3.3e-14 82.8 202 34.7
Cfa009996 Carpinus fangiana HOM05D005110 ORTHO05D006074 4.3e-14 82.4 194 34.5
Gohir.A05G079700 Gossypium hirsutum HOM05D005110 ORTHO05D006074 4.3e-14 82.4 203 35.5
Lsat_1_v5_gn_1_59041 Lactuca sativa HOM05D005110 ORTHO05D006074 4.3e-14 82.4 194 33.0
MD03G1148100 Malus domestica HOM05D005110 ORTHO05D006074 4.3e-14 82.4 194 34.0
Potri.009G019300 Populus trichocarpa HOM05D005110 ORTHO05D006074 4.3e-14 82.4 194 33.5
Sed0010097 Sechium edule HOM05D005110 ORTHO05D006074 4.3e-14 82.4 207 34.3
Nitab4.5_0005472g0010 Nicotiana tabacum HOM05D005110 ORTHO05D006074 7.4e-14 81.6 204 32.8
Oeu035569.1 Olea europaea HOM05D005110 ORTHO05D006074 7.4e-14 81.6 195 32.8
Actinidia37076 Actinidia chinensis HOM05D005110 ORTHO05D006074 1.3e-13 80.9 203 33.0
Lalb_Chr03g0028181 Lupinus albus HOM05D005110 ORTHO05D006074 1.6e-13 80.5 175 32.0
MD11G1167600 Malus domestica HOM05D005110 ORTHO05D006074 1.6e-13 80.5 194 33.5
Lj3g0016581 Lotus japonicus HOM05D005110 ORTHO05D006074 2.1e-13 80.1 193 32.1
HanXRQChr13g0426031 Helianthus annuus HOM05D005110 ORTHO05D006074 2.8e-13 79.7 202 32.7
vmacro14345 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 6.2e-13 78.6 200 32.5
Gohir.D05G082600 Gossypium hirsutum HOM05D005110 ORTHO05D006074 8.2e-13 78.2 203 34.5
Gorai.009G084200 Gossypium raimondii HOM05D005110 ORTHO05D006074 8.2e-13 78.2 203 34.5
Oeu027156.1 Olea europaea HOM05D005110 ORTHO05D006074 8.2e-13 78.2 192 33.3
PGSC0003DMG400005884 Solanum tuberosum HOM05D005110 ORTHO05D006074 8.2e-13 78.2 192 34.4
CSS0002660 Camellia sinensis var. sinensis HOM05D005110 ORTHO05D006074 1.1e-12 77.8 198 33.8
Rhsim13G0112900 Rhododendron simsii HOM05D005110 ORTHO05D006074 1.1e-12 77.8 203 33.0
DCAR_010338 Daucus carota HOM05D005110 ORTHO05D006074 1.4e-12 77.4 193 32.6
TWI31G0848 Tripterygium wilfordii HOM05D005110 ORTHO05D006074 1.4e-12 77.4 192 33.9
Manes.04G002101 Manihot esculenta HOM05D005110 ORTHO05D006074 1.8e-12 77.0 117 36.8
vmacro03324 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 1.8e-12 77.0 203 32.0
Atru.chr3.3190 Acer truncatum HOM05D005110 ORTHO05D006074 2.4e-12 76.6 195 30.8
Actinidia25117 Actinidia chinensis HOM05D005110 ORTHO05D006074 2.4e-12 76.6 199 35.2
Psat7g142160 Pisum sativum HOM05D005110 ORTHO05D006074 2.4e-12 76.6 192 33.3
Sopen06g030680 Solanum pennellii HOM05D005110 ORTHO05D006074 2.4e-12 76.6 192 33.9
ClCG02G022270 Citrullus lanatus HOM05D005110 ORTHO05D006074 3.1e-12 76.3 176 35.8
Nitab4.5_0000937g0070 Nicotiana tabacum HOM05D005110 ORTHO05D006074 3.1e-12 76.3 196 31.6
CAN.G919.35 Capsicum annuum HOM05D005110 ORTHO05D006074 4.1e-12 75.9 192 33.3
Cc01_g08910 Coffea canephora HOM05D005110 ORTHO05D006074 4.1e-12 75.9 195 32.3
HanXRQChr01g0024471 Helianthus annuus HOM05D005110 ORTHO05D006074 4.1e-12 75.9 194 34.0
Os02g0535300 Oryza sativa ssp. japonica HOM05D005110 ORTHO05D006074 4.1e-12 75.9 219 34.7
Psat5g259000 Pisum sativum HOM05D005110 ORTHO05D006074 4.1e-12 75.9 192 31.2
Solyc06g074260.4 Solanum lycopersicum HOM05D005110 ORTHO05D006074 4.1e-12 75.9 192 34.4
VMungo1127G0906 Vigna mungo HOM05D005110 ORTHO05D006074 4.1e-12 75.9 194 30.9
arahy.Tifrunner.gnm1.ann1.XFIF97 Arachis hypogaea HOM05D005110 ORTHO05D006074 6.9e-12 75.1 176 33.0
Glyma.12G091100 Glycine max HOM05D005110 ORTHO05D006074 6.9e-12 75.1 195 30.3
CiPaw.13G134200 Carya illinoinensis HOM05D005110 ORTHO05D006074 1.5e-11 73.9 202 31.2
Peaxi162Scf00091g00622 Petunia axillaris HOM05D005110 ORTHO05D006074 2.0e-11 73.6 203 32.5
Phvul.011G095400 Phaseolus vulgaris HOM05D005110 ORTHO05D006074 3.4e-11 72.8 200 33.0
Aa31LG1G13130 Aethionema arabicum HOM05D005110 ORTHO05D006074 4.5e-11 72.4 206 30.6
Lalb_Chr19g0136401 Lupinus albus HOM05D005110 ORTHO05D006074 4.5e-11 72.4 175 29.7
TAR623G0362 Trochodendron aralioides HOM05D005110 ORTHO05D006074 4.5e-11 72.4 117 36.8
CARHR191100 Cardamine hirsuta HOM05D005110 ORTHO05D006074 5.8e-11 72.0 205 33.2
Migut.D02434 Erythranthe guttata HOM05D005110 ORTHO05D006074 5.8e-11 72.0 181 32.6
TAR369G1010 Trochodendron aralioides HOM05D005110 ORTHO05D006074 5.8e-11 72.0 142 37.3
VMungo1080G1295 Vigna mungo HOM05D005110 ORTHO05D006074 7.6e-11 71.6 192 31.8
arahy.Tifrunner.gnm1.ann1.EYNG7S Arachis hypogaea HOM05D005110 ORTHO05D006074 1.0e-10 71.2 176 32.4
CsaV3_6G038400 Cucumis sativus L. HOM05D005110 ORTHO05D006074 1.0e-10 71.2 176 33.5
QL01p011973 Quercus lobata HOM05D005110 ORTHO05D006074 1.3e-10 70.9 193 31.1
Eucgr.B03836 Eucalyptus grandis HOM05D005110 ORTHO05D006074 1.7e-10 70.5 211 30.3
Lj3g0002892 Lotus japonicus HOM05D005110 ORTHO05D006074 2.9e-10 69.7 193 31.1
Sp6g22820 Schrenkiella parvula HOM05D005110 ORTHO05D006074 2.9e-10 69.7 203 31.0
Glyma.11G182100 Glycine max HOM05D005110 ORTHO05D006074 3.8e-10 69.3 196 30.1
TPR.G17227 Trifolium pratense HOM05D005110 ORTHO05D006074 5.0e-10 68.9 192 31.8
AL6G33450 Arabidopsis lyrata HOM05D005110 ORTHO05D006074 6.5e-10 68.6 206 30.6
BolC2t07157H Brassica oleracea HOM05D005110 ORTHO05D006074 8.4e-10 68.2 203 30.5
CiPaw.14G098700 Carya illinoinensis HOM05D005110 ORTHO05D006074 8.4e-10 68.2 194 33.5
MELO3C014504.2 Cucumis melo HOM05D005110 ORTHO05D006074 8.4e-10 68.2 176 33.5
A07p18150 Brassica napus HOM05D005110 ORTHO05D006074 2.5e-09 66.6 176 30.7
AT5G22430 Arabidopsis thaliana HOM05D005110 ORTHO05D006074 3.2e-09 66.2 205 31.7
BNapus_Darmor_BZH_scaffold_38p00660 Brassica napus HOM05D005110 ORTHO05D006074 3.2e-09 66.2 203 30.0
Carub.0004s0802 Capsella rubella HOM05D005110 ORTHO05D006074 3.2e-09 66.2 193 31.1
MSTRG.21034 Avicennia marina HOM05D005110 ORTHO05D006074 4.2e-09 65.9 200 31.5
Thhalv10002110m.g Eutrema salsugineum HOM05D005110 ORTHO05D006074 4.2e-09 65.9 176 31.8
C02p10870 Brassica napus HOM05D005110 ORTHO05D006074 5.5e-09 65.5 202 29.7
Thhalv10014830m.g Eutrema salsugineum HOM05D005110 ORTHO05D006074 7.1e-09 65.1 203 31.0
Sp4g10180 Schrenkiella parvula HOM05D005110 ORTHO05D006074 7.1e-09 65.1 203 31.5
THA.LOC104800521 Tarenaya hassleriana HOM05D005110 ORTHO05D006074 7.1e-09 65.1 203 29.1
MSTRG.18766 Avicennia marina HOM05D005110 ORTHO05D006074 9.3e-09 64.7 180 32.2
BcaB08g36432 Brassica carinata HOM05D000477 ORTHO05D006074 9.3e-09 64.7 194 30.4
BraA02t05659Z Brassica rapa HOM05D005110 ORTHO05D006074 9.3e-09 64.7 203 30.0
Carub.0006s2017 Capsella rubella HOM05D005110 ORTHO05D006074 9.3e-09 64.7 205 30.2
CARHR119990 Cardamine hirsuta HOM05D005110 ORTHO05D006074 9.3e-09 64.7 194 31.4
BcaB02g10088 Brassica carinata HOM05D005110 ORTHO05D006074 1.6e-08 63.9 203 29.6
BcaB05g22726 Brassica carinata HOM05D005110 ORTHO05D006074 1.6e-08 63.9 203 31.0
BcaC02g10869 Brassica carinata HOM05D005110 ORTHO05D006074 2.1e-08 63.5 204 31.9
AT2G27385 Arabidopsis thaliana HOM05D005110 ORTHO05D006074 3.5e-08 62.8 202 31.2
C04p24220 Brassica napus HOM05D005110 ORTHO05D006074 3.5e-08 62.8 204 31.9
BolC4t23920H Brassica oleracea HOM05D005110 ORTHO05D006074 3.5e-08 62.8 204 31.9
BraA07t29533Z Brassica rapa HOM05D005110 ORTHO05D006074 4.6e-08 62.4 176 29.0
Hund20930 Selenicereus undatus HOM05D005110 ORTHO05D006074 7.9e-08 61.6 163 34.4
SGA_v2.0_scaffold22G09852 Striga asiatica HOM05D005110 ORTHO05D006074 7.9e-08 61.6 203 31.0
BcaC03g13883 Brassica carinata HOM05D005110 ORTHO05D006074 1.3e-07 60.8 133 30.8
SalBow6G3038 Salvia bowleyana HOM05D005110 ORTHO05D006074 2.3e-07 60.1 197 28.9
ClCG01G012070 Citrullus lanatus HOM05D005110 ORTHO05D006074 5.1e-07 58.9 201 29.4
Haze_23356 Corylus avellana HOM05D005110 ORTHO05D006074 8.7e-07 58.2 92 39.1
vmacro14354 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 1.1e-06 57.8 96 37.5


User provided reference genes

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