Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005437 Vanilla planifolia HOM05D000804 ORTHO05D005389 1.0e-159 566.6 273 100.0
HPP92_005377 Vanilla planifolia HOM05D000804 ORTHO05D005389 6.4e-154 547.4 270 96.7
HPP92_005379 Vanilla planifolia HOM05D000804 ORTHO05D005389 1.2e-152 543.1 261 100.0
Dinv43539 Davidia involucrata HOM05D000804 ORTHO05D005389 1.1e-57 227.6 284 43.0
THA.LOC104825451 Tarenaya hassleriana HOM05D000804 ORTHO05D005389 1.9e-57 226.9 276 44.6
Nn1g09657 Nelumbo nucifera HOM05D000804 ORTHO05D005389 5.6e-57 225.3 284 41.5
Actinidia21598 Actinidia chinensis HOM05D000804 ORTHO05D005389 2.8e-56 223.0 290 42.8
Nitab4.5_0003594g0030 Nicotiana tabacum HOM05D000804 ORTHO05D005389 2.8e-56 223.0 286 43.7
CSS0037336 Camellia sinensis var. sinensis HOM05D000804 ORTHO05D005389 3.6e-56 222.6 292 42.1
Potri.019G043800 Populus trichocarpa HOM05D000804 ORTHO05D005389 4.7e-56 222.2 271 42.1
TAR375G0260 Trochodendron aralioides HOM05D000804 ORTHO05D005389 1.1e-55 221.1 283 43.5
Duzib128G1116 Durio zibethinus HOM05D000804 ORTHO05D005389 2.0e-54 216.9 288 41.7
Peaxi162Scf00592g00212 Petunia axillaris HOM05D000804 ORTHO05D005389 2.0e-54 216.9 284 44.0
Haze_15812 Corylus avellana HOM05D000804 ORTHO05D005389 4.4e-54 215.7 282 44.0
Solyc01g081050.4 Solanum lycopersicum HOM05D000804 ORTHO05D005389 5.8e-54 215.3 291 41.2
CAN.G700.21 Capsicum annuum HOM05D000804 ORTHO05D005389 7.5e-54 214.9 295 43.4
Lsat_1_v5_gn_1_84561 Lactuca sativa HOM05D000804 ORTHO05D005389 7.5e-54 214.9 269 42.0
SalBow4G2892 Salvia bowleyana HOM05D000804 ORTHO05D005389 9.9e-54 214.5 283 43.5
Cfa003676 Carpinus fangiana HOM05D000804 ORTHO05D005389 1.3e-53 214.2 285 43.5
arahy.Tifrunner.gnm1.ann1.00QVML Arachis hypogaea HOM05D000804 ORTHO05D005389 2.9e-53 213.0 288 39.9
Sabra19G0054400 Salix brachista HOM05D000804 ORTHO05D005389 3.7e-53 212.6 275 41.8
Migut.N01690 Erythranthe guttata HOM05D000804 ORTHO05D005389 8.3e-53 211.5 279 41.2
TWI32G1345 Tripterygium wilfordii HOM05D000804 ORTHO05D005389 1.4e-52 210.7 281 39.5
MSTRG.4983 Avicennia marina HOM05D000804 ORTHO05D005389 3.2e-52 209.5 282 40.4
Psat4g196240 Pisum sativum HOM05D000804 ORTHO05D005389 5.4e-52 208.8 287 40.4
TPR.G30883 Trifolium pratense HOM05D000804 ORTHO05D005389 7.1e-52 208.4 291 41.2
Eucgr.D01046 Eucalyptus grandis HOM05D000804 ORTHO05D005389 9.2e-52 208.0 278 43.2
Aa31LG9G17950 Aethionema arabicum HOM05D000804 ORTHO05D005389 1.2e-51 207.6 273 41.0
Thhalv10003545m.g Eutrema salsugineum HOM05D000804 ORTHO05D005389 2.1e-51 206.8 272 40.8
Gohir.A13G075600 Gossypium hirsutum HOM05D000804 ORTHO05D005389 2.1e-51 206.8 288 39.2
Rhsim01G0135000 Rhododendron simsii HOM05D000804 ORTHO05D005389 2.1e-51 206.8 271 43.2
Sp7g06220 Schrenkiella parvula HOM05D000804 ORTHO05D005389 2.1e-51 206.8 271 41.3
Lj3g0026096 Lotus japonicus HOM05D000804 ORTHO05D005389 2.7e-51 206.5 288 39.9
arahy.Tifrunner.gnm1.ann1.A8SNFY Arachis hypogaea HOM05D000804 ORTHO05D005389 1.7e-50 203.8 297 38.4
Ca_23827_v3 Cicer arietinum L. HOM05D000804 ORTHO05D005389 1.7e-50 203.8 287 39.4
Ciclev10030562m.g Citrus clementina HOM05D000804 ORTHO05D005389 2.3e-50 203.4 268 43.3
Gohir.D13G099900 Gossypium hirsutum HOM05D000804 ORTHO05D005389 2.3e-50 203.4 288 38.5
Gorai.013G111900 Gossypium raimondii HOM05D000804 ORTHO05D005389 2.3e-50 203.4 288 38.5
Oeu024961.1 Olea europaea HOM05D000804 ORTHO05D005389 3.0e-50 203.0 292 39.4
Cc02_g26260 Coffea canephora HOM05D000804 ORTHO05D005389 3.9e-50 202.6 287 39.4
Lalb_Chr07g0189561 Lupinus albus HOM05D000804 ORTHO05D005389 5.1e-50 202.2 287 41.1
Medtr8g035620 Medicago truncatula HOM05D000804 ORTHO05D005389 8.6e-50 201.4 287 38.3
PSO063G5197 Papaver somniferum HOM05D000804 ORTHO05D005389 1.5e-49 200.7 284 40.1
Aqoxy3G02136 Aquilegia oxysepala HOM05D000804 ORTHO05D005389 2.5e-49 199.9 270 41.1
Ca_23822_v3 Cicer arietinum L. HOM05D000804 ORTHO05D005389 4.3e-49 199.1 281 39.5
Sed0024810 Sechium edule HOM05D000804 ORTHO05D005389 4.3e-49 199.1 288 41.7
MELO3C020372.2 Cucumis melo HOM05D000804 ORTHO05D005389 7.3e-49 198.4 281 40.2
CsaV3_2G011020 Cucumis sativus L. HOM05D000804 ORTHO05D005389 7.3e-49 198.4 280 40.0
VMungo0331G0574 Vigna mungo HOM05D000804 ORTHO05D005389 7.3e-49 198.4 287 38.7
AT5G35930 Arabidopsis thaliana HOM05D000804 ORTHO05D005389 1.2e-48 197.6 268 39.9
Carub.0007s3171 Capsella rubella HOM05D000804 ORTHO05D005389 1.6e-48 197.2 268 40.3
Glyma.03G021000 Glycine max HOM05D000804 ORTHO05D005389 2.8e-48 196.4 287 38.3
HanXRQChr01g0020521 Helianthus annuus HOM05D000804 ORTHO05D005389 3.6e-48 196.1 269 41.6
QL04p052206 Quercus lobata HOM05D000804 ORTHO05D005389 3.6e-48 196.1 274 41.6
GSVIVG01011337001 Vitis vinifera HOM05D000804 ORTHO05D005389 3.6e-48 196.1 285 40.4
AL7G44840 Arabidopsis lyrata HOM05D000804 ORTHO05D005389 1.4e-47 194.1 268 40.3
ClCG06G008140 Citrullus lanatus HOM05D000804 ORTHO05D005389 1.4e-47 194.1 280 40.0
ECA248G3066 Erigeron canadensis HOM05D000804 ORTHO05D005389 2.4e-47 193.4 266 44.4
Migut.O00426 Erythranthe guttata HOM05D000804 ORTHO05D005389 3.1e-47 193.0 275 40.4
Atru.chr2.1715 Acer truncatum HOM05D000804 ORTHO05D005389 4.0e-47 192.6 285 39.6
SGA_v2.0_scaffold4G02207 Striga asiatica HOM05D000804 ORTHO05D005389 4.0e-47 192.6 303 37.3
BcaC07g37646 Brassica carinata HOM05D000804 ORTHO05D005389 5.2e-47 192.2 276 42.0
CARHR216700 Cardamine hirsuta HOM05D000804 ORTHO05D005389 6.8e-47 191.8 269 38.7
Manes.09G131500 Manihot esculenta HOM05D000804 ORTHO05D005389 1.5e-46 190.7 281 39.5
DCAR_029554 Daucus carota HOM05D000804 ORTHO05D005389 2.6e-46 189.9 285 36.8
ATR0829G026 Amborella trichopoda HOM05D000804 ORTHO05D005389 3.4e-46 189.5 309 38.5
PGR083G1621 Punica granatum HOM05D000804 ORTHO05D005389 3.4e-46 189.5 286 40.2
CDE12G0088 Ceratophyllum demersum HOM05D000804 ORTHO05D005389 5.8e-46 188.7 305 37.0
BraA08t32948Z Brassica rapa HOM05D000804 ORTHO05D005389 7.1e-44 181.8 273 39.6
CiPaw.01G087500 Carya illinoinensis HOM05D000804 ORTHO05D005389 9.3e-44 181.4 275 41.1
A08p09490 Brassica napus HOM05D000804 ORTHO05D005389 6.0e-43 178.7 271 39.5
BcaC07g37648 Brassica carinata HOM05D000804 ORTHO05D005389 1.0e-42 177.9 277 40.1
vmacro21110 Vaccinium macrocarpon HOM05D000804 ORTHO05D005389 1.0e-42 177.9 401 31.4
BolC8t48020H Brassica oleracea HOM05D000804 ORTHO05D005389 1.1e-41 174.5 279 40.1
EL10Ac5g10540 Beta vulgaris HOM05D000804 ORTHO05D005389 5.6e-41 172.2 269 38.3
unitig_22.g5901 Utricularia gibba HOM05D000804 ORTHO05D005389 7.3e-41 171.8 263 35.7
AUR62028598 Chenopodium quinoa HOM05D000804 ORTHO05D005389 3.8e-37 159.5 268 34.3
Sc17g0001320 Simmondsia chinensis HOM05D000804 ORTHO05D005389 3.8e-37 159.5 274 37.2
FAN10G1244 Fragaria x ananassa HOM05D000804 ORTHO05D005389 3.2e-36 156.4 269 35.7
arahy.Tifrunner.gnm1.ann1.WIDJ0V Arachis hypogaea HOM05D000804 ORTHO05D005389 4.2e-36 156.0 273 34.1
FAN06G2879 Fragaria x ananassa HOM05D000804 ORTHO05D005389 4.2e-36 156.0 269 35.7
Prupe.2G098200 Prunus persica HOM05D000804 ORTHO05D005389 9.3e-36 154.8 269 37.9
MD07G1077300 Malus domestica HOM05D000804 ORTHO05D005389 2.1e-35 153.7 278 36.0
Lj7C558T5 Lonicera japonica HOM05D000804 ORTHO05D005389 6.0e-35 152.1 132 56.1
FAN01G2963 Fragaria x ananassa HOM05D000804 ORTHO05D005389 1.7e-34 150.6 269 34.6
Cpa.g.sc73.84 Carica papaya HOM05D000804 ORTHO05D005389 1.1e-31 141.4 141 48.9
Nitab4.5_0000592g0230 Nicotiana tabacum HOM05D000804 ORTHO05D005389 1.4e-31 141.0 127 54.3
Phvul.010G085900 Phaseolus vulgaris HOM05D000804 ORTHO05D005389 1.4e-31 141.0 147 45.6
Hma1.2p1_0684F.1_g202990 Hydrangea macrophylla HOM05D000804 ORTHO05D005389 2.4e-31 140.2 135 47.4
Ah.02g110870 Amaranthus hybridus HOM05D000804 ORTHO05D005389 4.0e-31 139.4 271 32.8
Zm00001eb378990 Zea mays HOM05D000804 ORTHO05D005389 2.0e-30 137.1 271 34.7
BcaB04g18017 Brassica carinata HOM05D000804 ORTHO05D005389 6.4e-29 132.1 271 34.7
RcHm_v2.0_Chr1g0337111 Rosa chinensis HOM05D000804 ORTHO05D005389 1.4e-28 131.0 235 35.7
SEGI_25496 Sequoiadendron giganteum HOM05D000804 ORTHO05D005389 1.6e-27 127.5 145 41.4
Os06g0111600 Oryza sativa ssp. japonica HOM05D000804 ORTHO05D005389 2.4e-23 113.6 140 45.7
AUR62017553 Chenopodium quinoa HOM05D000804 ORTHO05D005389 4.0e-23 112.8 132 42.4
RcHm_v2.0_Chr2g0102891 Rosa chinensis HOM05D000804 ORTHO05D005389 4.9e-21 105.9 132 40.9
AagrBONN_evm.TU.Sc2ySwM_117.1272 Anthoceros agrestis HOM05D000804 ORTHO05D005389 1.6e-16 90.9 142 38.0
Nitab4.5_0000592g0240 Nicotiana tabacum HOM05D000804 ORTHO05D005389 1.8e-15 87.4 107 42.1
SMO145G0113 Selaginella moellendorffii HOM05D000804 ORTHO05D005389 1.0e-13 81.6 143 32.9
Cpa.g.sc73.83 Carica papaya HOM05D000804 ORTHO05D005389 2.2e-08 63.9 107 33.6


User provided reference genes

Program Settings