Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005423 Vanilla planifolia HOM05D004819 ORTHO05D005654 2.7e-132 475.3 237 100.0
TAR365G0460 Trochodendron aralioides HOM05D004819 ORTHO05D005654 3.7e-89 332.0 263 62.0
Aqoxy2G02702 Aquilegia oxysepala HOM05D004819 ORTHO05D005654 2.4e-88 329.3 241 66.0
Nn2g14951 Nelumbo nucifera HOM05D004819 ORTHO05D005654 6.9e-88 327.8 255 62.0
CSS0034063 Camellia sinensis var. sinensis HOM05D004819 ORTHO05D005654 2.0e-87 326.2 255 63.5
Atru.chr4.3039 Acer truncatum HOM05D004819 ORTHO05D005654 3.4e-87 325.5 261 62.5
Lj3C833T2 Lonicera japonica HOM05D004819 ORTHO05D005654 7.7e-87 324.3 262 61.8
Manes.15G000800 Manihot esculenta HOM05D004819 ORTHO05D005654 5.0e-86 321.6 251 62.2
GSVIVG01034978001 Vitis vinifera HOM05D004819 ORTHO05D005654 5.0e-86 321.6 265 60.8
Thecc.04G302500 Theobroma cacao HOM05D004819 ORTHO05D005654 6.5e-86 321.2 241 64.7
Manes.03G205800 Manihot esculenta HOM05D004819 ORTHO05D005654 1.4e-85 320.1 251 61.8
Haze_01312 Corylus avellana HOM05D004819 ORTHO05D005654 1.9e-85 319.7 262 60.7
Sabra10G0113000 Salix brachista HOM05D004819 ORTHO05D005654 1.9e-85 319.7 263 60.1
Eucgr.H04055 Eucalyptus grandis HOM05D004819 ORTHO05D005654 2.5e-85 319.3 240 63.3
Zm00001eb014900 Zea mays HOM05D004819 ORTHO05D005654 3.2e-85 318.9 258 62.4
Dinv15153 Davidia involucrata HOM05D004819 ORTHO05D005654 5.5e-85 318.2 255 61.2
TPR.G25430 Trifolium pratense HOM05D004819 ORTHO05D005654 5.5e-85 318.2 259 62.2
VMungo1215G1911 Vigna mungo HOM05D004819 ORTHO05D005654 5.5e-85 318.2 241 65.1
Gohir.D10G179600 Gossypium hirsutum HOM05D004819 ORTHO05D005654 7.2e-85 317.8 263 60.1
Phvul.003G115600 Phaseolus vulgaris HOM05D004819 ORTHO05D005654 7.2e-85 317.8 256 62.5
COL.COLO4_34600 Corchorus olitorius HOM05D004819 ORTHO05D005654 9.4e-85 317.4 260 59.6
Actinidia40384 Actinidia chinensis HOM05D004819 ORTHO05D005654 1.2e-84 317.0 261 60.9
Cfa015302 Carpinus fangiana HOM05D004819 ORTHO05D005654 1.2e-84 317.0 259 60.2
Ca_21436_v3 Cicer arietinum L. HOM05D004819 ORTHO05D005654 1.6e-84 316.6 256 61.7
Gohir.A10G173100 Gossypium hirsutum HOM05D004819 ORTHO05D005654 1.6e-84 316.6 263 58.9
Gorai.011G200900 Gossypium raimondii HOM05D004819 ORTHO05D005654 2.1e-84 316.2 263 59.7
FvH4_4g19930 Fragaria vesca HOM05D004819 ORTHO05D005654 2.7e-84 315.8 241 63.5
FAN12G0990 Fragaria x ananassa HOM05D004819 ORTHO05D005654 2.7e-84 315.8 241 63.5
Lj4g0007943 Lotus japonicus HOM05D004819 ORTHO05D005654 2.7e-84 315.8 258 63.6
MD16G1152500 Malus domestica HOM05D004819 ORTHO05D005654 2.7e-84 315.8 241 63.1
Psat4g022840 Pisum sativum HOM05D004819 ORTHO05D005654 2.7e-84 315.8 258 60.9
Oeu052162.4 Olea europaea HOM05D004819 ORTHO05D005654 3.6e-84 315.5 257 60.7
Prupe.1G115700 Prunus persica HOM05D004819 ORTHO05D005654 4.7e-84 315.1 242 62.8
PSO210G2958 Papaver somniferum HOM05D004819 ORTHO05D005654 7.9e-84 314.3 243 64.2
RcHm_v2.0_Chr4g0425571 Rosa chinensis HOM05D004819 ORTHO05D005654 7.9e-84 314.3 258 61.2
arahy.Tifrunner.gnm1.ann1.ZA4S8T Arachis hypogaea HOM05D004819 ORTHO05D005654 1.0e-83 313.9 258 60.5
CsaV3_3G015230 Cucumis sativus L. HOM05D004819 ORTHO05D005654 1.8e-83 313.2 261 59.8
PSO761G0636 Papaver somniferum HOM05D004819 ORTHO05D005654 1.8e-83 313.2 243 63.8
arahy.Tifrunner.gnm1.ann1.HD9JLY Arachis hypogaea HOM05D004819 ORTHO05D005654 2.3e-83 312.8 258 60.5
Potri.010G146800 Populus trichocarpa HOM05D004819 ORTHO05D005654 2.3e-83 312.8 263 58.9
Glyma.17G034800 Glycine max HOM05D004819 ORTHO05D005654 3.9e-83 312.0 254 61.8
Sed0001798 Sechium edule HOM05D004819 ORTHO05D005654 3.9e-83 312.0 256 59.0
Duzib212G0926 Durio zibethinus HOM05D004819 ORTHO05D005654 6.7e-83 311.2 241 62.7
Glyma.07G238900 Glycine max HOM05D004819 ORTHO05D005654 6.7e-83 311.2 254 61.4
FAN07G2526 Fragaria x ananassa HOM05D004819 ORTHO05D005654 1.1e-82 310.5 258 59.7
MSTRG.10156 Avicennia marina HOM05D004819 ORTHO05D005654 2.0e-82 309.7 260 57.3
Lalb_Chr07g0182051 Lupinus albus HOM05D004819 ORTHO05D005654 2.0e-82 309.7 260 60.4
PGR004G0637 Punica granatum HOM05D004819 ORTHO05D005654 2.0e-82 309.7 263 58.6
Oeu046577.1 Olea europaea HOM05D004819 ORTHO05D005654 4.4e-82 308.5 260 58.1
Migut.G00071 Erythranthe guttata HOM05D004819 ORTHO05D005654 7.4e-82 307.8 260 56.9
Ciclev10004336m.g Citrus clementina HOM05D004819 ORTHO05D005654 9.7e-82 307.4 241 61.8
SalBow8G2376 Salvia bowleyana HOM05D004819 ORTHO05D005654 9.7e-82 307.4 260 58.1
Rhsim04G0240100 Rhododendron simsii HOM05D004819 ORTHO05D005654 1.7e-81 306.6 270 59.3
Sc09g0007260 Simmondsia chinensis HOM05D004819 ORTHO05D005654 4.8e-81 305.1 241 59.3
AUR62016223 Chenopodium quinoa HOM05D004819 ORTHO05D005654 6.3e-81 304.7 241 59.8
QL06p012610 Quercus lobata HOM05D004819 ORTHO05D005654 6.3e-81 304.7 261 58.6
ATR0693G033 Amborella trichopoda HOM05D004819 ORTHO05D005654 8.2e-81 304.3 257 58.0
ClCG05G006610 Citrullus lanatus HOM05D004819 ORTHO05D005654 1.8e-80 303.1 255 58.8
CANSAT78G1713 Cannabis sativa HOM05D004819 ORTHO05D005654 2.4e-80 302.8 257 58.8
Cpa.g.sc9.47 Carica papaya HOM05D004819 ORTHO05D005654 7.0e-80 301.2 254 58.7
AUR62039265 Chenopodium quinoa HOM05D004819 ORTHO05D005654 9.1e-80 300.8 259 55.6
THA.LOC104802608 Tarenaya hassleriana HOM05D004819 ORTHO05D005654 1.5e-79 300.1 261 57.1
Hund03132 Selenicereus undatus HOM05D004819 ORTHO05D005654 2.0e-79 299.7 250 57.2
EL10Ac3g05522 Beta vulgaris HOM05D004819 ORTHO05D005654 2.6e-79 299.3 258 57.8
Solyc01g058730.4 Solanum lycopersicum HOM05D004819 ORTHO05D005654 5.9e-79 298.1 257 58.0
Sopen01g024570 Solanum pennellii HOM05D004819 ORTHO05D005654 5.9e-79 298.1 257 58.0
SGA_v2.0_scaffold104G30069 Striga asiatica HOM05D004819 ORTHO05D005654 5.9e-79 298.1 262 57.3
DCAR_030463 Daucus carota HOM05D004819 ORTHO05D005654 1.3e-78 297.0 241 59.8
Sed0007022 Sechium edule HOM05D004819 ORTHO05D005654 2.2e-78 296.2 254 56.3
Lsat_1_v5_gn_1_41600 Lactuca sativa HOM05D004819 ORTHO05D005654 2.9e-78 295.8 263 55.9
PGSC0003DMG400001205 Solanum tuberosum HOM05D004819 ORTHO05D005654 1.5e-77 293.5 257 57.2
TWI09G1587 Tripterygium wilfordii HOM05D004819 ORTHO05D005654 1.5e-77 293.5 254 57.9
ECA233G5711 Erigeron canadensis HOM05D004819 ORTHO05D005654 1.9e-77 293.1 238 58.8
Cc03_g00710 Coffea canephora HOM05D004819 ORTHO05D005654 5.5e-77 291.6 247 57.1
Lsat_1_v5_gn_6_1101 Lactuca sativa HOM05D004819 ORTHO05D005654 7.2e-77 291.2 263 54.8
HanXRQChr11g0353871 Helianthus annuus HOM05D004819 ORTHO05D005654 1.4e-75 287.0 261 54.0
Nitab4.5_0000931g0050 Nicotiana tabacum HOM05D004819 ORTHO05D005654 1.8e-75 286.6 264 55.7
Peaxi162Scf00228g00333 Petunia axillaris HOM05D004819 ORTHO05D005654 9.7e-74 280.8 263 55.5
unitig_88.g27704 Utricularia gibba HOM05D002812 ORTHO05D005654 7.0e-72 274.6 253 54.2
AL7G38910 Arabidopsis lyrata HOM05D004819 ORTHO05D005654 1.6e-71 273.5 261 54.8
CiPaw.01G137100 Carya illinoinensis HOM05D004819 ORTHO05D005654 7.7e-71 271.2 254 55.1
Carub.0007s2536 Capsella rubella HOM05D004819 ORTHO05D005654 1.1e-69 267.3 261 54.0
Nn4g25546 Nelumbo nucifera HOM05D004819 ORTHO05D005654 1.1e-69 267.3 223 59.6
SHI00126 Sapria himalayana HOM05D004819 ORTHO05D005654 1.5e-69 266.9 264 51.9
Thhalv10024420m.g Eutrema salsugineum HOM05D004819 ORTHO05D005654 5.5e-69 265.0 241 55.2
GSVIVG01034925001 Vitis vinifera HOM05D004819 ORTHO05D005654 9.4e-69 264.2 215 59.5
Sp7g14690 Schrenkiella parvula HOM05D004819 ORTHO05D005654 1.2e-68 263.8 261 52.5
MELO3C006720.2 Cucumis melo HOM05D004819 ORTHO05D005654 1.6e-68 263.5 238 55.9
AT4G16180 Arabidopsis thaliana HOM05D004819 ORTHO05D005654 2.1e-68 263.1 247 54.3
BcaC06g32994 Brassica carinata HOM05D004819 ORTHO05D005654 3.6e-68 262.3 261 52.9
CARHR222550 Cardamine hirsuta HOM05D004819 ORTHO05D005654 6.1e-68 261.5 260 52.7
C01p26720 Brassica napus HOM05D004819 ORTHO05D005654 1.0e-67 260.8 261 52.1
BcaC09g50317 Brassica carinata HOM05D004819 ORTHO05D005654 2.3e-67 259.6 261 52.1
A01p21370 Brassica napus HOM05D004819 ORTHO05D005654 3.0e-67 259.2 261 52.1
BcaC06g33458 Brassica carinata HOM05D004819 ORTHO05D005654 4.0e-67 258.8 261 52.5
A03p49650 Brassica napus HOM05D004819 ORTHO05D005654 5.2e-67 258.5 261 52.1
C07p47720 Brassica napus HOM05D004819 ORTHO05D005654 5.2e-67 258.5 261 52.5
BraA01t02042Z Brassica rapa HOM05D004819 ORTHO05D005654 5.2e-67 258.5 263 52.5
BolC1t02613H Brassica oleracea HOM05D004819 ORTHO05D005654 4.4e-66 255.4 263 51.7
BcaNung00215 Brassica carinata HOM05D004819 ORTHO05D005654 1.3e-65 253.8 261 52.1
HanXRQChr02g0048601 Helianthus annuus HOM05D004819 ORTHO05D005654 2.8e-65 252.7 260 50.0
Aa31LG10G5910 Aethionema arabicum HOM05D004819 ORTHO05D005654 8.3e-65 251.1 259 50.6
GSVIVG01034917001 Vitis vinifera HOM05D004819 ORTHO05D005654 8.3e-65 251.1 202 61.4
BolC7t45297H Brassica oleracea HOM05D004819 ORTHO05D005654 1.1e-64 250.8 271 50.6
BraA03t14064Z Brassica rapa HOM05D004819 ORTHO05D005654 1.6e-63 246.9 281 48.4
CDE02G0522 Ceratophyllum demersum HOM05D004819 ORTHO05D005654 2.9e-62 242.7 208 60.6
Mapoly0066s0100 Marchantia polymorpha HOM05D004819 ORTHO05D005654 1.5e-61 240.4 262 47.3
Ah.05g176730 Amaranthus hybridus HOM05D004819 ORTHO05D005654 4.7e-60 235.3 201 58.7
AagrBONN_evm.TU.Sc2ySwM_362.583 Anthoceros agrestis HOM05D004819 ORTHO05D005654 3.1e-56 222.6 253 44.7
Pp3c5_14560 Physcomitrium patens HOM05D004819 ORTHO05D005654 3.8e-54 215.7 257 44.0
Pp3c16_6520 Physcomitrium patens HOM05D004819 ORTHO05D005654 6.6e-54 214.9 261 43.3
vmacro08030 Vaccinium macrocarpon HOM05D004819 ORTHO05D005654 7.5e-50 201.4 144 67.4
SEGI_02776 Sequoiadendron giganteum HOM05D004819 ORTHO05D005654 8.9e-43 177.9 146 59.6
SMO298G0056 Selaginella moellendorffii HOM05D004819 ORTHO05D005654 2.8e-36 156.4 236 41.1
Actinidia18457 Actinidia chinensis HOM05D004819 ORTHO05D005654 4.0e-35 152.5 231 41.6
TWI53G0610 Tripterygium wilfordii HOM05D004819 ORTHO05D005654 1.2e-34 151.0 208 43.3
CBR_g61507 Chara braunii HOM05D004819 ORTHO05D005654 1.5e-26 124.0 242 29.8
Lsat_1_v5_gn_9_59160 Lactuca sativa HOM05D004819 ORTHO05D005654 1.7e-14 84.0 66 57.6
vmacro08031 Vaccinium macrocarpon HOM05D004819 ORTHO05D005654 4.8e-12 75.9 224 29.5
MCO15G339 Micromonas commoda HOM05D004819 ORTHO05D005654 1.8e-11 73.9 254 26.8
ECA234G0649 Erigeron canadensis HOM05D004819 ORTHO05D005654 2.7e-07 60.1 111 36.9


User provided reference genes

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