Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005414 Vanilla planifolia HOM05D002002 ORTHO05D008797 0.0e+00 1671.0 896 100.0
Dinv15235 Davidia involucrata HOM05D002002 ORTHO05D008797 2.2e-78 298.1 963 32.4
Potri.010G046000 Populus trichocarpa HOM05D002002 ORTHO05D008797 3.8e-78 297.4 912 33.4
Os04g0661700 Oryza sativa ssp. japonica HOM05D002002 ORTHO05D008797 1.8e-75 288.5 914 31.8
ATR0824G114 Amborella trichopoda HOM05D002002 ORTHO05D008797 1.7e-73 282.0 782 33.5
Sabra08G0141500 Salix brachista HOM05D002002 ORTHO05D008797 1.2e-71 275.8 896 31.7
Dinv24786 Davidia involucrata HOM05D002002 ORTHO05D008797 2.0e-71 275.0 807 32.2
GSVIVG01005756001 Vitis vinifera HOM05D002002 ORTHO05D008797 1.2e-68 265.8 598 36.1
Manes.13G024600 Manihot esculenta HOM05D002002 ORTHO05D008797 1.0e-67 262.7 935 31.6
Aqoxy3G01206 Aquilegia oxysepala HOM05D002002 ORTHO05D008797 9.7e-66 256.1 1013 32.4
Potri.008G186900 Populus trichocarpa HOM05D002002 ORTHO05D008797 9.7e-66 256.1 916 31.1
Migut.K00597 Erythranthe guttata HOM05D002002 ORTHO05D008797 3.7e-65 254.2 959 32.4
TAR374G0715 Trochodendron aralioides HOM05D002002 ORTHO05D008797 2.4e-64 251.5 963 31.2
Nitab4.5_0000007g0090 Nicotiana tabacum HOM05D002002 ORTHO05D008797 3.1e-64 251.1 928 31.6
QL03p058108 Quercus lobata HOM05D002002 ORTHO05D008797 1.2e-63 249.2 708 32.3
MD16G1102300 Malus domestica HOM05D002002 ORTHO05D008797 3.4e-63 247.7 893 32.5
PSO017G3282 Papaver somniferum HOM05D002002 ORTHO05D008797 1.7e-62 245.4 958 32.7
CsaV3_5G031140 Cucumis sativus L. HOM05D002002 ORTHO05D008797 1.2e-60 239.2 984 32.1
Atru.chr11.2102 Acer truncatum HOM05D002002 ORTHO05D008797 2.7e-60 238.0 951 28.8
MELO3C011952.2 Cucumis melo HOM05D002002 ORTHO05D008711 4.7e-60 237.3 949 31.6
Eucgr.H02500 Eucalyptus grandis HOM05D002002 ORTHO05D008797 4.7e-60 237.3 1001 29.9
Duzib248G0209 Durio zibethinus HOM05D002002 ORTHO05D008797 3.0e-59 234.6 962 29.2
ECA233G4520 Erigeron canadensis HOM05D002002 ORTHO05D008797 5.7e-58 230.3 891 30.3
Phvul.003G065200 Phaseolus vulgaris HOM05D002002 ORTHO05D008797 5.7e-58 230.3 908 30.8
Ciclev10030634m.g Citrus clementina HOM05D002002 ORTHO05D008797 3.7e-57 227.6 946 29.9
Lalb_Chr16g0392181 Lupinus albus HOM05D002002 ORTHO05D008797 4.8e-57 227.3 973 31.2
Gorai.012G173000 Gossypium raimondii HOM05D002002 ORTHO05D008797 6.3e-57 226.9 954 30.1
Nitab4.5_0009240g0010 Nicotiana tabacum HOM05D002002 ORTHO05D008797 1.4e-56 225.7 546 34.1
Gohir.D04G179800 Gossypium hirsutum HOM05D002002 ORTHO05D008797 2.4e-56 224.9 954 30.0
Actinidia15094 Actinidia chinensis HOM05D002002 ORTHO05D008797 4.1e-56 224.2 999 29.7
Gohir.A04G136700 Gossypium hirsutum HOM05D002002 ORTHO05D008797 1.6e-55 222.2 743 30.8
Cfa009210 Carpinus fangiana HOM05D002002 ORTHO05D008797 7.7e-55 219.9 939 31.0
Cpa.g.sc33.18 Carica papaya HOM05D002002 ORTHO05D008797 1.3e-54 219.2 882 27.8
MD13G1101700 Malus domestica HOM05D002002 ORTHO05D008797 1.3e-54 219.2 785 33.4
Duzib251G0042 Durio zibethinus HOM05D002002 ORTHO05D008797 2.9e-54 218.0 977 29.6
ClCG05G025730 Citrullus lanatus HOM05D002002 ORTHO05D008797 1.9e-53 215.3 951 29.3
EL10Ac6g13807 Beta vulgaris HOM05D002002 ORTHO05D008797 3.2e-53 214.5 910 31.9
RcHm_v2.0_Chr4g0432951 Rosa chinensis HOM05D002002 ORTHO05D008797 3.2e-53 214.5 779 31.7
CiPaw.05G182600 Carya illinoinensis HOM05D002002 ORTHO05D008797 7.2e-53 213.4 944 29.1
Glyma.18G143900 Glycine max HOM05D002002 ORTHO05D008797 4.0e-51 207.6 914 30.4
vmacro16196 Vaccinium macrocarpon HOM05D002002 ORTHO05D008797 1.5e-50 205.7 536 34.5
Rhsim12G0110400 Rhododendron simsii HOM05D002002 ORTHO05D008797 3.3e-50 204.5 382 41.4
AUR62024280 Chenopodium quinoa HOM05D002002 ORTHO05D008797 9.7e-50 203.0 754 31.0
FAN17G1038 Fragaria x ananassa HOM05D002002 ORTHO05D008711 9.7e-50 203.0 855 31.6
Haze_12247 Corylus avellana HOM05D002002 ORTHO05D008711 2.2e-49 201.8 977 27.5
CAN.G832.3 Capsicum annuum HOM05D002002 ORTHO05D008797 2.8e-49 201.4 865 29.4
Oeu059906.4 Olea europaea HOM05D002002 ORTHO05D008797 2.8e-49 201.4 686 33.2
Thecc.02G259600 Theobroma cacao HOM05D002002 ORTHO05D008797 6.3e-49 200.3 849 28.4
Peaxi162Scf00128g00134 Petunia axillaris HOM05D002002 ORTHO05D008797 2.0e-47 195.3 955 29.3
AUR62005461 Chenopodium quinoa HOM05D002002 ORTHO05D008797 1.0e-46 193.0 747 31.3
Sed0005394 Sechium edule HOM05D002002 ORTHO05D008797 1.0e-46 193.0 877 29.5
COL.COLO4_24277 Corchorus olitorius HOM05D002002 ORTHO05D008797 2.2e-46 191.8 379 39.1
Sc11g0000970 Simmondsia chinensis HOM05D002002 ORTHO05D008797 2.9e-46 191.4 950 31.2
Nn3g16709 Nelumbo nucifera HOM05D002002 ORTHO05D008797 3.8e-46 191.0 1053 26.9
SGA_v2.0_scaffold476G52131 Striga asiatica HOM05D002002 ORTHO05D008797 5.0e-46 190.7 935 27.5
FvH4_4g25541 Fragaria vesca HOM05D002002 ORTHO05D008797 6.5e-46 190.3 855 31.2
Prupe.1G244100 Prunus persica HOM05D002002 ORTHO05D008797 5.5e-45 187.2 718 34.7
Sopen05g008360 Solanum pennellii HOM05D002002 ORTHO05D008797 4.7e-44 184.1 905 27.7
Zm00001eb067460 Zea mays HOM05D002002 ORTHO05D008797 4.7e-44 184.1 569 34.1
Glyma.08G282400 Glycine max HOM05D002002 ORTHO05D008797 6.1e-44 183.7 921 28.6
unitig_26.g10348 Utricularia gibba HOM05D002002 ORTHO05D008797 6.1e-44 183.7 918 29.4
DCAR_031153 Daucus carota HOM05D002002 ORTHO05D008797 1.4e-43 182.6 631 32.2
Ca_22584_v3 Cicer arietinum L. HOM05D002002 ORTHO05D008711 3.0e-43 181.4 838 29.6
SEGI_21221 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 1.2e-42 179.5 989 28.8
PGR119G0425 Punica granatum HOM05D002002 ORTHO05D008797 2.6e-42 178.3 931 29.0
CSS0037172 Camellia sinensis var. sinensis HOM05D002002 ORTHO05D008797 3.4e-42 177.9 990 28.5
arahy.Tifrunner.gnm1.ann1.PHTA8N Arachis hypogaea HOM05D002002 ORTHO05D008711 9.8e-42 176.4 882 28.3
Cc11_g15720 Coffea canephora HOM05D002002 ORTHO05D008797 3.7e-41 174.5 885 31.8
Oeu029877.3 Olea europaea HOM05D002002 ORTHO05D008797 3.7e-41 174.5 805 29.3
Lj4g0017193 Lotus japonicus HOM05D002002 ORTHO05D008797 4.8e-41 174.1 925 28.4
Nn4g22624 Nelumbo nucifera HOM05D002002 ORTHO05D008797 4.8e-41 174.1 1006 25.8
PSO478G2109 Papaver somniferum HOM05D002002 ORTHO05D008797 8.3e-41 173.3 955 29.4
SEGI_37990 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 1.1e-40 172.9 947 27.6
Psat4g115320 Pisum sativum HOM05D002002 ORTHO05D008797 1.8e-40 172.2 913 29.2
SalBow2G1965 Salvia bowleyana HOM05D002002 ORTHO05D008797 2.4e-40 171.8 951 26.0
Lalb_Chr05g0228431 Lupinus albus HOM05D002002 ORTHO05D008797 7.0e-40 170.2 917 28.7
TWI75G1475 Tripterygium wilfordii HOM05D002002 ORTHO05D008797 1.0e-38 166.4 977 28.1
FAN22G2309 Fragaria x ananassa HOM05D002002 ORTHO05D008797 1.9e-37 162.2 557 32.9
Hund25388 Selenicereus undatus HOM05D002002 ORTHO05D008797 2.5e-37 161.8 896 28.3
HanXRQChr08g0208141 Helianthus annuus HOM05D002002 ORTHO05D008797 3.3e-37 161.4 604 29.1
TPR.G17755 Trifolium pratense HOM05D002002 ORTHO05D008711 3.3e-37 161.4 499 33.5
arahy.Tifrunner.gnm1.ann1.YSSX7I Arachis hypogaea HOM05D002002 ORTHO05D008797 5.5e-37 160.6 851 28.6
DCAR_007056 Daucus carota HOM05D002002 ORTHO05D008797 1.6e-36 159.1 544 30.1
CDE07G1782 Ceratophyllum demersum HOM05D002002 ORTHO05D008797 1.0e-35 156.4 897 29.1
CANSAT01G0132 Cannabis sativa HOM05D002002 ORTHO05D008797 1.8e-35 155.6 952 26.5
TAR622G0079 Trochodendron aralioides HOM05D002002 ORTHO05D008797 2.2e-33 148.7 904 28.0
Aa31LG4G10340 Aethionema arabicum HOM05D002002 ORTHO05D008711 2.5e-29 135.2 921 28.9
AL2G30050 Arabidopsis lyrata HOM05D002002 ORTHO05D008797 1.6e-28 132.5 952 27.8
SGA_v2.0_scaffold98G29360 Striga asiatica HOM05D002002 ORTHO05D008797 3.6e-28 131.3 497 29.6
AT1G70620 Arabidopsis thaliana HOM05D002002 ORTHO05D008797 1.8e-27 129.0 301 37.2
Lsat_1_v5_gn_8_152141 Lactuca sativa HOM05D002002 ORTHO05D008711 3.1e-27 128.3 879 29.0
CARHR063850 Cardamine hirsuta HOM05D002002 ORTHO05D008797 1.7e-25 122.5 723 25.9
Mapoly0026s0020 Marchantia polymorpha HOM05D002002 ORTHO05D008797 4.7e-20 104.4 382 32.2
TPR.G3029 Trifolium pratense HOM05D002002 ORTHO05D008797 6.2e-20 104.0 438 28.8
Sp5g25780 Schrenkiella parvula HOM05D002002 ORTHO05D008797 2.3e-19 102.1 937 26.8
C02p28000 Brassica napus HOM05D002002 ORTHO05D008797 2.0e-18 99.0 509 28.3
Sed0026296 Sechium edule HOM05D002002 ORTHO05D008797 8.3e-17 93.6 393 27.7
Pp3c22_14720 Physcomitrium patens HOM05D002002 ORTHO05D008797 1.4e-16 92.8 494 28.3
Carub.0002s1735 Capsella rubella HOM05D002002 ORTHO05D008797 6.0e-15 87.4 639 27.2
A02p16740 Brassica napus HOM05D002002 ORTHO05D008797 3.9e-14 84.7 937 25.3
Thhalv10018098m.g Eutrema salsugineum HOM05D002002 ORTHO05D008797 6.2e-12 77.4 863 24.9
GSVIVG01005755001 Vitis vinifera HOM05D002002 ORTHO05D008797 6.2e-12 77.4 92 56.5
unitig_26.g10410 Utricularia gibba HOM05D002002 ORTHO05D008797 1.1e-11 76.6 197 33.5
BraA02t06728Z Brassica rapa HOM05D002002 ORTHO05D008797 3.1e-11 75.1 936 25.1
TPR.G3025 Trifolium pratense HOM05D002002 ORTHO05D008797 5.8e-10 70.9 215 30.7
Lj6A812T43 Lonicera japonica HOM05D002002 ORTHO05D008797 2.4e-08 65.5 345 24.3


User provided reference genes

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