Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005407 Vanilla planifolia HOM05D007620 ORTHO05D009568 2.6e-112 409.8 253 100.0
Nn1g02811 Nelumbo nucifera HOM05D007620 ORTHO05D009568 8.4e-26 122.5 108 53.7
CDE04G2606 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 4.2e-25 120.2 128 46.1
Duzib177G1032 Durio zibethinus HOM05D007620 ORTHO05D009568 1.6e-24 118.2 127 47.2
PSO210G6557 Papaver somniferum HOM05D007620 ORTHO05D009568 2.1e-24 117.9 156 39.1
Gohir.D11G257601 Gossypium hirsutum HOM05D007620 ORTHO05D009568 3.5e-24 117.1 126 45.2
Gorai.007G275900 Gossypium raimondii HOM05D007620 ORTHO05D009568 3.5e-24 117.1 126 45.2
Phvul.008G151824 Phaseolus vulgaris HOM05D007620 ORTHO05D009568 3.5e-24 117.1 129 42.6
Thecc.05G270800 Theobroma cacao HOM05D007620 ORTHO05D009568 4.6e-24 116.7 127 45.7
QL03p030456 Quercus lobata HOM05D007620 ORTHO05D009568 1.8e-23 114.8 133 45.9
CSS0021218 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 2.3e-23 114.4 148 43.2
CSS0034254 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 2.3e-23 114.4 148 43.2
VMungo0720G2663 Vigna mungo HOM05D007620 ORTHO05D009568 5.1e-23 113.2 129 41.1
CSS0013452 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 6.7e-23 112.8 148 42.6
Haze_04424 Corylus avellana HOM05D007620 ORTHO05D009568 6.7e-23 112.8 147 42.2
Psat0s1841g0080 Pisum sativum HOM05D007620 ORTHO05D009568 8.7e-23 112.5 133 42.1
Aqoxy5G00210 Aquilegia oxysepala HOM05D007620 ORTHO05D009568 1.1e-22 112.1 108 48.1
Hma1.2p1_1512F.1_g287900 Hydrangea macrophylla HOM05D007620 ORTHO05D009568 1.1e-22 112.1 139 42.4
CANSAT21G0311 Cannabis sativa HOM05D007620 ORTHO05D009568 1.5e-22 111.7 100 52.0
Migut.F00879 Erythranthe guttata HOM05D007620 ORTHO05D009568 4.3e-22 110.2 100 49.0
Sc09g0004220 Simmondsia chinensis HOM05D007620 ORTHO05D009568 4.3e-22 110.2 105 45.7
Gohir.A11G247300 Gossypium hirsutum HOM05D007620 ORTHO05D009568 7.4e-22 109.4 95 49.5
Glyma.20G222800 Glycine max HOM05D007620 ORTHO05D009568 1.6e-21 108.2 134 41.0
Lsat_1_v5_gn_8_24880 Lactuca sativa HOM05D007620 ORTHO05D009568 1.6e-21 108.2 145 40.0
Lj2C43T7 Lonicera japonica HOM05D007620 ORTHO05D009568 1.6e-21 108.2 137 40.1
CsaV3_1G045110 Cucumis sativus L. HOM05D007620 ORTHO05D009568 4.8e-21 106.7 153 39.9
MD04G1230300 Malus domestica HOM05D007620 ORTHO05D009568 4.8e-21 106.7 129 43.4
ClCG03G009720 Citrullus lanatus HOM05D007620 ORTHO05D009568 6.2e-21 106.3 131 41.2
Dinv24674 Davidia involucrata HOM05D007620 ORTHO05D009568 8.1e-21 105.9 139 39.6
Sed0010835 Sechium edule HOM05D007620 ORTHO05D009568 8.1e-21 105.9 140 40.0
MELO3C010128.2 Cucumis melo HOM05D007620 ORTHO05D009568 1.1e-20 105.5 153 39.2
THA.LOC104801727 Tarenaya hassleriana HOM05D007620 ORTHO05D009568 1.4e-20 105.1 145 38.6
Oeu026591.1 Olea europaea HOM05D007620 ORTHO05D009568 1.8e-20 104.8 100 47.0
TAR362G1297 Trochodendron aralioides HOM05D007620 ORTHO05D009568 2.4e-20 104.4 133 41.4
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.5e-19 101.7 130 40.0
EL10Ac4g09018 Beta vulgaris HOM05D007620 ORTHO05D009568 2.0e-19 101.3 153 34.6
Cc02_g08810 Coffea canephora HOM05D007620 ORTHO05D009568 2.6e-19 100.9 130 40.8
ATR0736G141 Amborella trichopoda HOM05D007620 ORTHO05D009568 4.5e-19 100.1 101 44.6
C05p62520 Brassica napus HOM05D007620 ORTHO05D009568 4.5e-19 100.1 95 48.4
Solyc04g010060.2 Solanum lycopersicum HOM05D007620 ORTHO05D009568 4.5e-19 100.1 153 36.6
BolC5t34907H Brassica oleracea HOM05D007620 ORTHO05D009568 1.3e-18 98.6 95 48.4
COL.COLO4_15485 Corchorus olitorius HOM05D007620 ORTHO05D009568 1.3e-18 98.6 98 43.9
Glyma.10G166400 Glycine max HOM05D007620 ORTHO05D009568 2.2e-18 97.8 137 36.5
Ciclev10019446m.g Citrus clementina HOM05D007620 ORTHO05D009568 2.9e-18 97.4 105 42.9
A05p42800 Brassica napus HOM05D007620 ORTHO05D009568 4.9e-18 96.7 145 37.9
BraA05t22972Z Brassica rapa HOM05D007620 ORTHO05D009568 4.9e-18 96.7 145 37.9
Lj2C43T8 Lonicera japonica HOM05D007620 ORTHO05D009568 6.5e-18 96.3 103 41.7
Atru.chr2.986 Acer truncatum HOM05D007620 ORTHO05D009568 1.1e-17 95.5 136 39.7
SGA_v2.0_scaffold13G06478 Striga asiatica HOM05D007620 ORTHO05D009568 4.2e-17 93.6 120 39.2
Psat6g139880 Pisum sativum HOM05D007620 ORTHO05D009568 2.3e-15 87.8 184 32.1
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 3.9e-15 87.0 100 44.0
CSS0031974 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 5.1e-15 86.7 129 41.1
Ca_09448_v3 Cicer arietinum L. HOM05D007620 ORTHO05D009568 6.7e-15 86.3 100 41.0
SalBow6G2000 Salvia bowleyana HOM05D007620 ORTHO05D009568 1.9e-14 84.7 74 47.3
ECA233G5729 Erigeron canadensis HOM05D007620 ORTHO05D009568 7.4e-14 82.8 77 44.2
Potri.013G047000 Populus trichocarpa HOM05D007620 ORTHO05D009568 1.3e-13 82.0 89 43.8
Sabra13G0043000 Salix brachista HOM05D007620 ORTHO05D009568 1.6e-13 81.6 95 44.2
Manes.08G053900 Manihot esculenta HOM05D007620 ORTHO05D009568 2.8e-13 80.9 95 45.3
GSVIVG01023503001 Vitis vinifera HOM05D007620 ORTHO05D009568 3.7e-13 80.5 121 41.3
Potri.019G019300 Populus trichocarpa HOM05D007620 ORTHO05D009568 1.1e-12 79.0 95 43.2
Cfa006355 Carpinus fangiana HOM05D007620 ORTHO05D009568 1.8e-12 78.2 145 33.8
MD12G1247200 Malus domestica HOM05D007620 ORTHO05D009568 9.0e-12 75.9 94 42.6
RcHm_v2.0_Chr3g0449651 Rosa chinensis HOM05D007620 ORTHO05D009568 4.5e-11 73.6 107 40.2
Lj5g0020911 Lotus japonicus HOM05D007620 ORTHO05D009568 5.8e-11 73.2 84 41.7
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.0e-10 72.4 96 39.6
Eucgr.H04228 Eucalyptus grandis HOM05D007620 ORTHO05D009568 1.3e-10 72.0 111 37.8
AUR62004839 Chenopodium quinoa HOM05D007620 ORTHO05D009568 1.7e-10 71.6 96 39.6
FvH4_6g01920 Fragaria vesca HOM05D007620 ORTHO05D009568 2.2e-10 71.2 96 39.6
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 2.2e-10 71.2 96 39.6
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 2.2e-10 71.2 96 39.6
AUR62040929 Chenopodium quinoa HOM05D007620 ORTHO05D009568 5.0e-10 70.1 96 38.5
MD12G1247400 Malus domestica HOM05D007620 ORTHO05D009568 5.0e-10 70.1 103 36.9
Glyma.03G251200 Glycine max HOM05D007620 ORTHO05D009568 1.1e-09 68.9 110 34.5
Lalb_Chr21g0311191 Lupinus albus HOM05D007620 ORTHO05D009568 1.1e-09 68.9 66 43.9
Lalb_Chr06g0168291 Lupinus albus HOM05D007620 ORTHO05D009568 1.4e-09 68.6 104 36.5
PGR004G2089 Punica granatum HOM05D007620 ORTHO05D009568 1.4e-09 68.6 140 35.7
Ah.06g191910 Amaranthus hybridus HOM05D007620 ORTHO05D009568 3.2e-09 67.4 95 34.7
Lj1g0023548 Lotus japonicus HOM05D007620 ORTHO05D009568 4.2e-09 67.0 100 34.0
Peaxi162Scf00528g00227 Petunia axillaris HOM05D007620 ORTHO05D009568 1.6e-08 65.1 133 30.8
CAN.G358.141 Capsicum annuum HOM05D007620 ORTHO05D009568 2.7e-08 64.3 141 30.5
Sp3g03610 Schrenkiella parvula HOM05D007620 ORTHO05D009568 2.7e-08 64.3 100 33.0
AL3G14890 Arabidopsis lyrata HOM05D007620 ORTHO05D009568 4.6e-08 63.5 66 43.9
Medtr1g080110 Medicago truncatula HOM05D007620 ORTHO05D009568 4.6e-08 63.5 73 38.4
PGSC0003DMG400011475 Solanum tuberosum HOM05D007620 ORTHO05D009568 4.6e-08 63.5 102 33.3
AT3G04760 Arabidopsis thaliana HOM05D007620 ORTHO05D009568 6.1e-08 63.2 66 42.4
Carub.0003s0393 Capsella rubella HOM05D007620 ORTHO05D009568 6.1e-08 63.2 66 42.4
Gohir.A03G129100 Gossypium hirsutum HOM05D000424 ORTHO05D008586 6.1e-08 63.2 98 34.7
CARHR079010 Cardamine hirsuta HOM05D007620 ORTHO05D009568 1.8e-07 61.6 66 42.4
Gohir.D02G152900 Gossypium hirsutum HOM05D000424 ORTHO05D008586 2.3e-07 61.2 100 32.0
Gorai.005G172000 Gossypium raimondii HOM05D000424 ORTHO05D008586 2.3e-07 61.2 100 32.0
Hund26855 Selenicereus undatus HOM05D006739 ORTHO05D008402 5.1e-07 60.1 104 37.5
Actinidia23531 Actinidia chinensis HOM05D000424 ORTHO05D038032 1.9e-06 58.2 165 24.8
Ah.08g214310 Amaranthus hybridus HOM05D000424 ORTHO05D000355 1.9e-06 58.2 100 31.0
arahy.Tifrunner.gnm1.ann1.5FY1X2 Arachis hypogaea HOM05D000424 ORTHO05D008586 1.9e-06 58.2 100 30.0
Aa31LG5G15170 Aethionema arabicum HOM05D007620 ORTHO05D009568 5.7e-06 56.6 66 37.9


User provided reference genes

Program Settings