Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005354 Vanilla planifolia HOM05D006974 ORTHO05D008869 6.3e-30 133.3 60 100.0
Nn1g01127 Nelumbo nucifera HOM05D006974 ORTHO05D008869 3.7e-14 80.9 57 61.4
Ah.07g208060 Amaranthus hybridus HOM05D006974 ORTHO05D008869 4.9e-14 80.5 53 62.3
Lj1C983G7 Lonicera japonica HOM05D006974 ORTHO05D008869 8.3e-14 79.7 53 60.4
EL10Ac3g05814 Beta vulgaris HOM05D006974 ORTHO05D008869 1.1e-13 79.3 53 60.4
Nitab4.5_0011187g0010 Nicotiana tabacum HOM05D006974 ORTHO05D008869 1.4e-13 79.0 53 60.4
Actinidia13564 Actinidia chinensis HOM05D006974 ORTHO05D008869 1.9e-13 78.6 59 55.9
TAR375G0533 Trochodendron aralioides HOM05D006974 ORTHO05D008869 1.9e-13 78.6 55 58.2
FvH4_7g27950 Fragaria vesca HOM05D006974 ORTHO05D008869 2.4e-13 78.2 57 56.1
FAN06G1320 Fragaria x ananassa HOM05D006974 ORTHO05D008869 2.4e-13 78.2 57 56.1
FAN06G2397 Fragaria x ananassa HOM05D006974 ORTHO05D008869 2.4e-13 78.2 57 56.1
Cpa.g.sc3.293 Carica papaya HOM05D006974 ORTHO05D008869 3.2e-13 77.8 59 50.8
PGR142G3751 Punica granatum HOM05D006974 ORTHO05D008869 3.2e-13 77.8 57 56.1
FAN10G1329 Fragaria x ananassa HOM05D006974 ORTHO05D008869 4.1e-13 77.4 51 60.8
Potri.015G129500 Populus trichocarpa HOM05D006974 ORTHO05D008869 4.1e-13 77.4 53 58.5
FAN03G1551 Fragaria x ananassa HOM05D006974 ORTHO05D008869 5.4e-13 77.0 51 60.8
arahy.Tifrunner.gnm1.ann1.HSX4XS Arachis hypogaea HOM05D006974 ORTHO05D008869 7.1e-13 76.6 59 52.5
arahy.Tifrunner.gnm1.ann1.X6V7BH Arachis hypogaea HOM05D006974 ORTHO05D008869 7.1e-13 76.6 59 52.5
arahy.Tifrunner.gnm1.ann1.XAT8RN Arachis hypogaea HOM05D004498 ORTHO05D005300 7.1e-13 76.6 59 52.5
arahy.Tifrunner.gnm1.ann1.XGT93E Arachis hypogaea HOM05D006974 ORTHO05D008869 7.1e-13 76.6 59 52.5
Nitab4.5_0000162g0040 Nicotiana tabacum HOM05D006974 ORTHO05D008869 7.1e-13 76.6 53 58.5
Peaxi162Scf00023g01024 Petunia axillaris HOM05D006974 ORTHO05D008869 7.1e-13 76.6 53 58.5
Migut.F00452 Erythranthe guttata HOM05D006974 ORTHO05D008869 9.2e-13 76.3 55 56.4
Hma1.2p1_0654F.1_g196510 Hydrangea macrophylla HOM05D006974 ORTHO05D008869 1.2e-12 75.9 53 56.6
Dinv22966 Davidia involucrata HOM05D006974 ORTHO05D008869 2.1e-12 75.1 53 56.6
Lj3g0014807 Lotus japonicus HOM05D006974 ORTHO05D008869 2.1e-12 75.1 59 50.8
Atru.chr1.665 Acer truncatum HOM05D006974 ORTHO05D008869 2.7e-12 74.7 53 54.7
arahy.Tifrunner.gnm1.ann1.0U86FS Arachis hypogaea HOM05D006974 ORTHO05D008869 2.7e-12 74.7 59 50.8
Ciclev10004462m.g Citrus clementina HOM05D006974 ORTHO05D008869 2.7e-12 74.7 53 56.6
Thecc.03G158800 Theobroma cacao HOM05D006974 ORTHO05D008869 2.7e-12 74.7 54 57.4
RcHm_v2.0_Chr1g0374901 Rosa chinensis HOM05D006974 ORTHO05D008869 3.5e-12 74.3 51 60.8
Sabra15G0142800 Salix brachista HOM05D006974 ORTHO05D008869 3.5e-12 74.3 53 56.6
Cfa008219 Carpinus fangiana HOM05D006974 ORTHO05D008869 4.6e-12 73.9 53 50.9
QL09p019059 Quercus lobata HOM05D006974 ORTHO05D008869 4.6e-12 73.9 53 50.9
MSTRG.27184 Avicennia marina HOM05D006974 ORTHO05D008869 6.0e-12 73.6 53 56.6
CsaV3_5G005460 Cucumis sativus L. HOM05D006974 ORTHO05D008869 6.0e-12 73.6 49 61.2
Duzib205G0143 Durio zibethinus HOM05D006974 ORTHO05D008869 6.0e-12 73.6 54 55.6
Manes.14G034100 Manihot esculenta HOM05D006974 ORTHO05D008869 6.0e-12 73.6 59 47.5
SalBow4G0051 Salvia bowleyana HOM05D006974 ORTHO05D008869 6.0e-12 73.6 49 57.1
Haze_13839 Corylus avellana HOM05D006974 ORTHO05D008869 7.8e-12 73.2 53 50.9
MBI04_g35667_MAGBIO Magnolia biondii HOM05D006974 ORTHO05D008869 7.8e-12 73.2 55 56.4
Rhsim03G0169600 Rhododendron simsii HOM05D006974 ORTHO05D008869 7.8e-12 73.2 58 55.2
unitig_46.g18767 Utricularia gibba HOM05D006974 ORTHO05D008869 7.8e-12 73.2 57 50.9
Aqoxy7G00678 Aquilegia oxysepala HOM05D006974 ORTHO05D008869 1.0e-11 72.8 58 55.2
Cc02_g04050 Coffea canephora HOM05D006974 ORTHO05D008869 1.0e-11 72.8 54 53.7
Gohir.A12G265001 Gossypium hirsutum HOM05D006974 ORTHO05D008869 1.0e-11 72.8 54 53.7
Gohir.D12G265200 Gossypium hirsutum HOM05D006974 ORTHO05D008869 1.0e-11 72.8 54 53.7
Gorai.008G284900 Gossypium raimondii HOM05D006974 ORTHO05D008869 1.0e-11 72.8 54 53.7
Prupe.2G280600 Prunus persica HOM05D006974 ORTHO05D008869 1.0e-11 72.8 51 54.9
CSS0030811 Camellia sinensis var. sinensis HOM05D006974 ORTHO05D008869 1.3e-11 72.4 59 50.8
TWI39G1009 Tripterygium wilfordii HOM05D006974 ORTHO05D008869 1.3e-11 72.4 52 55.8
AUR62035101 Chenopodium quinoa HOM05D006974 ORTHO05D008869 2.3e-11 71.6 53 52.8
SGA_v2.0_scaffold2G01176 Striga asiatica HOM05D006974 ORTHO05D008869 2.3e-11 71.6 53 54.7
CAN.G254.11 Capsicum annuum HOM05D006974 ORTHO05D008869 3.0e-11 71.2 53 54.7
ClCG01G005180 Citrullus lanatus HOM05D006974 ORTHO05D008869 3.0e-11 71.2 49 59.2
Os09g0532700 Oryza sativa ssp. japonica HOM05D006974 ORTHO05D008869 3.0e-11 71.2 50 60.0
Phvul.011G007000 Phaseolus vulgaris HOM05D006974 ORTHO05D008869 3.0e-11 71.2 57 49.1
vmacro06778 Vaccinium macrocarpon HOM05D006974 ORTHO05D008869 3.0e-11 71.2 52 57.7
CiPaw.04G061700 Carya illinoinensis HOM05D006974 ORTHO05D008869 3.9e-11 70.9 49 53.1
AUR62016182 Chenopodium quinoa HOM05D006974 ORTHO05D008869 3.9e-11 70.9 53 52.8
PSO478G3596 Papaver somniferum HOM05D006974 ORTHO05D008869 3.9e-11 70.9 58 55.2
ECA233G0710 Erigeron canadensis HOM05D006974 ORTHO05D008869 5.1e-11 70.5 53 50.9
Hund11805 Selenicereus undatus HOM05D006974 ORTHO05D008869 6.6e-11 70.1 54 53.7
CDE11G0245 Ceratophyllum demersum HOM05D006974 ORTHO05D008869 1.1e-10 69.3 48 54.2
Sc19g0001920 Simmondsia chinensis HOM05D006974 ORTHO05D008869 1.1e-10 69.3 54 55.6
Eucgr.K00151 Eucalyptus grandis HOM05D006974 ORTHO05D008869 1.5e-10 68.9 53 52.8
MD01G1184400 Malus domestica HOM05D006974 ORTHO05D008869 1.5e-10 68.9 49 55.1
THA.LOC104808287 Tarenaya hassleriana HOM05D006974 ORTHO05D008869 1.5e-10 68.9 49 51.0
HanXRQChr05g0142471 Helianthus annuus HOM05D006974 ORTHO05D008869 1.9e-10 68.6 53 49.1
Lsat_1_v5_gn_8_9321 Lactuca sativa HOM05D006974 ORTHO05D008869 1.9e-10 68.6 53 49.1
Psat7g194280 Pisum sativum HOM05D006974 ORTHO05D008869 1.9e-10 68.6 59 44.1
BcaC06g32824 Brassica carinata HOM05D006974 ORTHO05D008869 3.3e-10 67.8 58 43.1
GSVIVG01018563001 Vitis vinifera HOM05D006974 ORTHO05D008869 4.3e-10 67.4 53 50.9
Medtr4g036495 Medicago truncatula HOM05D006974 ORTHO05D008869 5.6e-10 67.0 53 47.2
TPR.G40155 Trifolium pratense HOM05D006974 ORTHO05D008869 7.3e-10 66.6 50 50.0
Carub.0007s1572 Capsella rubella HOM05D006974 ORTHO05D008869 9.5e-10 66.2 49 49.0
Zm00001eb319610 Zea mays HOM05D006974 ORTHO05D008869 1.2e-09 65.9 53 49.1
C07p54150 Brassica napus HOM05D006974 ORTHO05D008869 3.6e-09 64.3 58 39.7
A03p55870 Brassica napus HOM05D006974 ORTHO05D008869 4.7e-09 63.9 58 39.7
BraA03t14658Z Brassica rapa HOM05D006974 ORTHO05D008869 4.7e-09 63.9 58 39.7
Lj8A39G31 Lonicera japonica HOM05D006974 ORTHO05D008869 8.1e-09 63.2 68 42.6
AL7G27850 Arabidopsis lyrata HOM05D006974 ORTHO05D008869 1.1e-08 62.8 49 46.9
DCAR_020200 Daucus carota HOM05D006974 ORTHO05D008869 1.1e-08 62.8 49 51.0
Mapoly0176s0011 Marchantia polymorpha HOM05D006974 ORTHO05D008869 1.1e-08 62.8 52 46.2
BolC7t45901H Brassica oleracea HOM05D006974 ORTHO05D008869 2.3e-08 61.6 58 37.9
SEGI_07793 Sequoiadendron giganteum HOM05D006974 ORTHO05D008869 2.3e-08 61.6 54 44.4
Pp3c6_9800 Physcomitrium patens HOM05D006974 ORTHO05D008869 4.0e-08 60.8 52 46.2
Thhalv10024578m.g Eutrema salsugineum HOM05D006974 ORTHO05D008869 5.2e-08 60.5 49 42.9
AT4G25290 Arabidopsis thaliana HOM05D006974 ORTHO05D008869 9.9e-07 56.2 49 42.9
Pp3c3_8370 Physcomitrium patens HOM05D006974 ORTHO05D008869 9.9e-07 56.2 48 45.8
SMO296G0035 Selaginella moellendorffii HOM05D006974 ORTHO05D008869 9.9e-07 56.2 57 38.6
AagrBONN_evm.TU.Sc2ySwM_228.586 Anthoceros agrestis HOM05D006974 ORTHO05D008869 8.4e-06 53.1 40 50.0
Sp7g23310 Schrenkiella parvula HOM05D006974 ORTHO05D008869 8.4e-06 53.1 49 42.9


User provided reference genes

Program Settings