Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005283 Vanilla planifolia HOM05D007311 ORTHO05D009011 4.5e-106 387.9 188 100.0
Nn3g18546 Nelumbo nucifera HOM05D007311 ORTHO05D009011 2.8e-55 219.2 146 65.8
Peaxi162Scf00330g01216 Petunia axillaris HOM05D007311 ORTHO05D009011 4.4e-53 211.8 147 66.0
Aqoxy102s011 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 7.5e-53 211.1 144 65.3
Aqoxy2G03516 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 7.5e-53 211.1 144 65.3
CDE11G0786 Ceratophyllum demersum HOM05D007311 ORTHO05D009011 1.8e-51 206.5 146 61.0
CiPaw.11G077300 Carya illinoinensis HOM05D007311 ORTHO05D009011 2.4e-51 206.1 144 64.6
TAR629G0827 Trochodendron aralioides HOM05D007311 ORTHO05D009011 4.1e-51 205.3 146 65.1
QL12p002522 Quercus lobata HOM05D007311 ORTHO05D009011 9.2e-51 204.1 145 64.1
TWI32G0505 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 2.0e-50 203.0 149 63.1
Glyma.03G249600 Glycine max HOM05D007311 ORTHO05D009011 3.5e-50 202.2 144 63.9
Nitab4.5_0000623g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 3.5e-50 202.2 147 62.6
THA.LOC104811225 Tarenaya hassleriana HOM05D007311 ORTHO05D009011 3.5e-50 202.2 144 61.8
GSVIVG01036913001 Vitis vinifera HOM05D007311 ORTHO05D009011 3.5e-50 202.2 144 62.5
Duzib205G2009 Durio zibethinus HOM05D007311 ORTHO05D009011 7.8e-50 201.1 144 63.9
Glyma.19G247100 Glycine max HOM05D007311 ORTHO05D009011 1.0e-49 200.7 144 63.9
Cfa012633 Carpinus fangiana HOM05D007311 ORTHO05D009011 1.7e-49 199.9 135 67.4
Phvul.006G104200 Phaseolus vulgaris HOM05D007311 ORTHO05D009011 1.7e-49 199.9 144 63.9
ATR0796G066 Amborella trichopoda HOM05D007311 ORTHO05D009011 3.0e-49 199.1 170 55.9
COL.COLO4_16729 Corchorus olitorius HOM05D007311 ORTHO05D009011 3.0e-49 199.1 144 61.8
arahy.Tifrunner.gnm1.ann1.C28JQA Arachis hypogaea HOM05D007311 ORTHO05D009011 5.0e-49 198.4 144 63.2
arahy.Tifrunner.gnm1.ann1.M0M2WX Arachis hypogaea HOM05D007311 ORTHO05D009011 5.0e-49 198.4 144 63.2
Ciclev10002031m.g Citrus clementina HOM05D007311 ORTHO05D009011 6.6e-49 198.0 156 56.4
Potri.003G106700 Populus trichocarpa HOM05D007311 ORTHO05D009011 8.6e-49 197.6 145 63.4
Zm00001eb284430 Zea mays HOM05D007311 ORTHO05D009011 8.6e-49 197.6 148 58.1
RcHm_v2.0_Chr7g0214961 Rosa chinensis HOM05D007311 ORTHO05D009011 1.1e-48 197.2 144 60.4
A01p11360 Brassica napus HOM05D000351 ORTHO05D009011 1.5e-48 196.8 184 51.6
PSO210G1792 Papaver somniferum HOM05D007311 ORTHO05D009011 1.5e-48 196.8 147 61.2
FAN08G0573 Fragaria x ananassa HOM05D007311 ORTHO05D009011 2.5e-48 196.1 143 60.8
Gohir.D08G169100 Gossypium hirsutum HOM05D007311 ORTHO05D009011 2.5e-48 196.1 144 61.1
VMungo0540G0453 Vigna mungo HOM05D007311 ORTHO05D009011 2.5e-48 196.1 144 62.5
Lalb_Chr15g0076111 Lupinus albus HOM05D007311 ORTHO05D009011 3.3e-48 195.7 144 62.5
Prupe.5G015700 Prunus persica HOM05D007311 ORTHO05D009011 4.3e-48 195.3 144 62.5
Ca_09529_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 5.6e-48 194.9 144 65.3
Sabra03G0073500 Salix brachista HOM05D007311 ORTHO05D009011 5.6e-48 194.9 145 62.1
CAN.G22.34 Capsicum annuum HOM05D007311 ORTHO05D009011 9.5e-48 194.1 147 60.5
Migut.E01383 Erythranthe guttata HOM05D007311 ORTHO05D009011 9.5e-48 194.1 144 60.4
MBI03_g29283_MAGBIO Magnolia biondii HOM05D006174 ORTHO05D007987 9.5e-48 194.1 128 68.8
PSO238G0022 Papaver somniferum HOM05D007311 ORTHO05D009011 9.5e-48 194.1 147 59.9
Manes.15G187600 Manihot esculenta HOM05D007311 ORTHO05D009011 1.2e-47 193.7 144 61.1
Nitab4.5_0007008g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 1.2e-47 193.7 144 60.4
Sp7g18020 Schrenkiella parvula HOM05D007311 ORTHO05D009011 1.2e-47 193.7 144 60.4
TPR.G7011 Trifolium pratense HOM05D007311 ORTHO05D009011 1.2e-47 193.7 144 62.5
Psat0s3161g0160 Pisum sativum HOM05D007311 ORTHO05D009011 1.6e-47 193.4 144 64.6
MSTRG.1753 Avicennia marina HOM05D007311 ORTHO05D009011 2.1e-47 193.0 144 61.1
AUR62039076 Chenopodium quinoa HOM05D007311 ORTHO05D009011 2.8e-47 192.6 144 60.4
Lj1g0003439 Lotus japonicus HOM05D007311 ORTHO05D009011 2.8e-47 192.6 144 61.8
BcaC09g51414 Brassica carinata HOM05D007311 ORTHO05D009011 6.2e-47 191.4 144 59.0
SalBow3G0367 Salvia bowleyana HOM05D007311 ORTHO05D009011 6.2e-47 191.4 144 60.4
Aa31LG6G2000 Aethionema arabicum HOM05D007311 ORTHO05D009011 1.1e-46 190.7 144 60.4
Solyc08g075070.3 Solanum lycopersicum HOM05D007311 ORTHO05D009011 1.1e-46 190.7 147 59.9
BraA01t01079Z Brassica rapa HOM05D007311 ORTHO05D009011 1.4e-46 190.3 144 59.0
Thhalv10024796m.g Eutrema salsugineum HOM05D000351 ORTHO05D009011 1.4e-46 190.3 156 55.8
BcaNung01781 Brassica carinata HOM05D007311 ORTHO05D009011 2.3e-46 189.5 144 58.3
C01p13360 Brassica napus HOM05D007311 ORTHO05D009011 3.1e-46 189.1 144 58.3
PGR031G0344 Punica granatum HOM05D007311 ORTHO05D009011 3.1e-46 189.1 144 59.0
Oeu031947.3 Olea europaea HOM05D007311 ORTHO05D009011 4.0e-46 188.7 164 56.1
Hma1.2p1_0294F.1_g116450 Hydrangea macrophylla HOM05D007311 ORTHO05D009011 5.2e-46 188.3 144 57.6
Cc01_g03300 Coffea canephora HOM05D007311 ORTHO05D009011 8.9e-46 187.6 144 62.5
Lsat_1_v5_gn_9_12020 Lactuca sativa HOM05D007311 ORTHO05D009011 8.9e-46 187.6 144 60.4
MD16G1286900 Malus domestica HOM05D007311 ORTHO05D009011 8.9e-46 187.6 144 59.7
CARHR226190 Cardamine hirsuta HOM05D007311 ORTHO05D009011 1.2e-45 187.2 144 56.9
Carub.0007s2183 Capsella rubella HOM05D007311 ORTHO05D009011 2.0e-45 186.4 145 58.6
EL10Ac9g22274 Beta vulgaris HOM05D007311 ORTHO05D009011 2.6e-45 186.0 144 57.6
Gohir.A08G147900 Gossypium hirsutum HOM05D007311 ORTHO05D009011 2.6e-45 186.0 144 57.6
Medtr7g115450 Medicago truncatula HOM05D007311 ORTHO05D009011 2.6e-45 186.0 144 60.4
Medtr7g115470 Medicago truncatula HOM05D007311 ORTHO05D009011 2.6e-45 186.0 144 60.4
Thecc.03G322100 Theobroma cacao HOM05D007311 ORTHO05D009011 2.6e-45 186.0 150 60.0
AL7G34740 Arabidopsis lyrata HOM05D007311 ORTHO05D009011 3.4e-45 185.7 145 56.6
ClCG07G011190 Citrullus lanatus HOM05D000351 ORTHO05D000250 4.4e-45 185.3 144 57.6
FAN18G0784 Fragaria x ananassa HOM05D007311 ORTHO05D009011 4.4e-45 185.3 168 51.8
Hund06317 Selenicereus undatus HOM05D007311 ORTHO05D009011 9.8e-45 184.1 144 56.9
MELO3C016211.2 Cucumis melo HOM05D007311 ORTHO05D009011 2.9e-44 182.6 144 56.9
CsaV3_4G007060 Cucumis sativus L. HOM05D007311 ORTHO05D009011 2.9e-44 182.6 144 56.9
AT4G19400 Arabidopsis thaliana HOM05D007311 ORTHO05D009011 4.9e-44 181.8 145 56.6
AT4G19410 Arabidopsis thaliana HOM05D000351 ORTHO05D009011 4.9e-44 181.8 145 56.6
FvH4_5g24490 Fragaria vesca HOM05D007311 ORTHO05D009011 4.9e-44 181.8 168 50.6
Sed0011898 Sechium edule HOM05D000351 ORTHO05D000250 6.4e-44 181.4 144 57.6
Haze_08033 Corylus avellana HOM05D007311 ORTHO05D009011 2.4e-43 179.5 210 45.2
SGA_v2.0_scaffold144G35891 Striga asiatica HOM05D007311 ORTHO05D009011 5.4e-43 178.3 161 54.7
HanXRQChr07g0198461 Helianthus annuus HOM05D007311 ORTHO05D009011 1.2e-42 177.2 145 55.2
ECA233G4235 Erigeron canadensis HOM05D007311 ORTHO05D009011 1.0e-41 174.1 147 54.4
Eucgr.E01832 Eucalyptus grandis HOM05D007311 ORTHO05D009011 1.0e-41 174.1 140 57.9
vmacro22112 Vaccinium macrocarpon HOM05D007311 ORTHO05D009011 1.7e-41 173.3 167 50.9
Gorai.004G176300 Gossypium raimondii HOM05D007311 ORTHO05D009011 2.3e-41 172.9 182 47.3
Os05g0241400 Oryza sativa ssp. japonica HOM05D007311 ORTHO05D009011 3.0e-41 172.6 118 62.7
CANSAT35G1819 Cannabis sativa HOM05D000351 ORTHO05D000250 5.0e-41 171.8 152 55.3
DCAR_030948 Daucus carota HOM05D007311 ORTHO05D009011 5.0e-41 171.8 138 57.2
unitig_899.g14733 Utricularia gibba HOM05D007311 ORTHO05D009011 1.1e-40 170.6 145 53.8
PGSC0003DMG400020814 Solanum tuberosum HOM05D007311 ORTHO05D009011 1.9e-40 169.9 175 48.6
Sc18g0005580 Simmondsia chinensis HOM05D007311 ORTHO05D009011 2.8e-39 166.0 137 54.7
Cpa.g.sc542.2 Carica papaya HOM05D007311 ORTHO05D009011 4.0e-38 162.2 123 60.2
QL12p002612 Quercus lobata HOM05D007311 ORTHO05D009011 8.9e-38 161.0 144 52.1
AUR62010310 Chenopodium quinoa HOM05D007311 ORTHO05D009011 9.9e-37 157.5 118 59.3
CSS0046759 Camellia sinensis var. sinensis HOM05D007311 ORTHO05D009011 1.3e-33 147.1 108 64.8
Dinv37446 Davidia involucrata HOM05D007311 ORTHO05D009011 2.2e-28 129.8 102 56.9
AagrBONN_evm.TU.Sc2ySwM_228.4293 Anthoceros agrestis HOM05D007311 ORTHO05D009011 6.4e-28 128.3 146 37.7
SEGI_31752 Sequoiadendron giganteum HOM05D007311 ORTHO05D009011 9.2e-27 124.4 98 52.0
Sopen08g023700 Solanum pennellii HOM05D007311 ORTHO05D009011 1.2e-26 124.0 93 59.1
Ah.01g011070 Amaranthus hybridus HOM05D007311 ORTHO05D009011 1.9e-24 116.7 100 56.0
TWI60G1527 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 6.2e-23 111.7 144 42.4
SMO139G0010 Selaginella moellendorffii HOM05D007311 ORTHO05D009011 1.4e-22 110.5 155 36.1
Eucgr.E01790 Eucalyptus grandis HOM05D007311 ORTHO05D009011 1.5e-16 90.5 81 55.6
Mapoly0040s0015 Marchantia polymorpha HOM05D007311 ORTHO05D009011 4.3e-16 89.0 147 30.6
SalBow8G5581 Salvia bowleyana HOM05D007311 ORTHO05D009011 1.6e-15 87.0 64 59.4
Eucgr.E01869 Eucalyptus grandis HOM05D007311 ORTHO05D009011 4.8e-15 85.5 63 57.1
SalBow1G6002 Salvia bowleyana HOM05D007311 ORTHO05D009011 4.8e-15 85.5 63 60.3
Zm00001eb347540 Zea mays HOM05D007311 ORTHO05D009011 2.6e-13 79.7 66 50.0
BcaC02g07636 Brassica carinata HOM05D007311 ORTHO05D009011 1.7e-12 77.0 62 54.8
Rhsim07G0141400 Rhododendron simsii HOM05D000351 ORTHO05D000250 3.8e-12 75.9 128 36.7
Ciclev10003443m.g Citrus clementina HOM05D007311 ORTHO05D009011 6.4e-12 75.1 79 43.0
Medtr5g045430 Medicago truncatula HOM05D007311 ORTHO05D009011 2.7e-10 69.7 63 52.4
FAN13G1634 Fragaria x ananassa HOM05D007311 ORTHO05D009011 1.3e-09 67.4 44 59.1
Ca_12103_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 1.6e-07 60.5 37 70.3


User provided reference genes

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