Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005221 Vanilla planifolia HOM05D005720 ORTHO05D006984 0.0e+00 1746.5 882 100.0
HPP92_005214 Vanilla planifolia HOM05D005720 ORTHO05D006984 0.0e+00 1194.1 879 74.5
MBI06_g04292_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 8.7e-152 542.0 976 40.3
Nn1g01775 Nelumbo nucifera HOM05D005720 ORTHO05D006984 4.5e-140 503.1 992 38.0
Dinv28352 Davidia involucrata HOM05D005720 ORTHO05D006984 4.6e-137 493.0 988 37.6
GSVIVG01028746001 Vitis vinifera HOM05D005720 ORTHO05D006984 2.0e-127 461.1 944 36.5
Prupe.2G305400 Prunus persica HOM05D005720 ORTHO05D006984 5.7e-127 459.5 976 34.3
Aqoxy7G00210 Aquilegia oxysepala HOM05D005720 ORTHO05D006984 9.1e-125 452.2 978 34.7
QL09p011597 Quercus lobata HOM05D005720 ORTHO05D006984 1.2e-124 451.8 985 35.0
Manes.06G155900 Manihot esculenta HOM05D005720 ORTHO05D006984 4.2e-122 443.4 976 34.1
Hma1.2p1_0142F.1_g064130 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 5.5e-122 443.0 972 34.9
Potri.012G033800 Populus trichocarpa HOM05D005720 ORTHO05D006984 2.3e-120 437.6 973 34.0
Cfa016346 Carpinus fangiana HOM05D005720 ORTHO05D006984 8.2e-118 429.1 985 34.0
MD01G1213400 Malus domestica HOM05D005720 ORTHO05D006984 1.1e-117 428.7 975 35.1
Rhsim03G0197100 Rhododendron simsii HOM05D005720 ORTHO05D006984 1.8e-117 427.9 975 33.8
Actinidia08611 Actinidia chinensis HOM05D005720 ORTHO05D006984 1.7e-115 421.4 821 35.8
MD07G1283200 Malus domestica HOM05D005720 ORTHO05D006984 6.5e-115 419.5 977 34.4
CiPaw.06G006200 Carya illinoinensis HOM05D005720 ORTHO05D006984 2.5e-114 417.5 981 33.6
Sabra12G0022900 Salix brachista HOM05D005720 ORTHO05D006984 7.2e-114 416.0 978 33.8
COL.COLO4_24780 Corchorus olitorius HOM05D005720 ORTHO05D006984 1.6e-113 414.8 1037 33.7
AT5G52950 Arabidopsis thaliana HOM05D005720 ORTHO05D006984 2.1e-113 414.5 937 33.7
Duzib084G1243 Durio zibethinus HOM05D005720 ORTHO05D006984 3.6e-113 413.7 1000 33.6
Thhalv10012590m.g Eutrema salsugineum HOM05D005720 ORTHO05D006984 3.6e-113 413.7 934 33.6
AL8G27450 Arabidopsis lyrata HOM05D005720 ORTHO05D006984 6.1e-113 412.9 943 34.3
Thecc.03G190400 Theobroma cacao HOM05D005720 ORTHO05D006984 8.0e-113 412.5 991 33.5
PSO384G4812 Papaver somniferum HOM05D005720 ORTHO05D006984 2.3e-112 411.0 968 31.9
TWI39G1277 Tripterygium wilfordii HOM05D005720 ORTHO05D006984 4.0e-112 410.2 980 32.8
PSO135G0324 Papaver somniferum HOM05D005720 ORTHO05D006984 1.5e-111 408.3 972 32.2
Gohir.A09G183200 Gossypium hirsutum HOM05D005720 ORTHO05D006984 3.3e-111 407.1 969 34.0
Gohir.D09G177900 Gossypium hirsutum HOM05D005720 ORTHO05D006984 5.7e-111 406.4 970 34.1
CARHR265920 Cardamine hirsuta HOM05D005720 ORTHO05D006984 6.3e-110 402.9 931 33.4
Cc02_g02050 Coffea canephora HOM05D005720 ORTHO05D006984 1.2e-108 398.7 937 34.0
Aa31LG3G9180 Aethionema arabicum HOM05D005720 ORTHO05D006984 2.7e-108 397.5 933 32.9
TAR629G0723 Trochodendron aralioides HOM05D005720 ORTHO05D006984 1.0e-107 395.6 777 36.8
FvH4_7g30790 Fragaria vesca HOM05D005720 ORTHO05D006984 2.9e-107 394.0 973 32.5
THA.LOC104825125 Tarenaya hassleriana HOM05D005720 ORTHO05D006984 2.7e-105 387.5 933 32.7
BolC2t08045H Brassica oleracea HOM05D005720 ORTHO05D006984 1.4e-104 385.2 944 32.7
FAN06G1427 Fragaria x ananassa HOM05D005720 ORTHO05D006984 1.4e-104 385.2 980 32.0
Gorai.006G200000 Gossypium raimondii HOM05D005720 ORTHO05D006984 1.4e-104 385.2 954 32.9
FAN03G0014 Fragaria x ananassa HOM05D005720 ORTHO05D006984 2.3e-104 384.4 975 32.6
Carub.0008s1313 Capsella rubella HOM05D005720 ORTHO05D006984 4.0e-104 383.6 937 31.9
Oeu037117.2 Olea europaea HOM05D005720 ORTHO05D006984 5.2e-104 383.3 968 32.0
FAN06G3446 Fragaria x ananassa HOM05D005720 ORTHO05D006984 8.8e-104 382.5 977 32.1
A02p11480 Brassica napus HOM05D005720 ORTHO05D006984 1.2e-103 382.1 951 32.1
SalBow4G2908 Salvia bowleyana HOM05D005720 ORTHO05D006984 1.2e-103 382.1 959 33.4
Zm00001eb119640 Zea mays HOM05D005720 ORTHO05D006984 1.2e-103 382.1 940 33.1
BcaC03g14481 Brassica carinata HOM05D005720 ORTHO05D006984 2.0e-103 381.3 931 32.3
AUR62031469 Chenopodium quinoa HOM05D005720 ORTHO05D006984 2.6e-103 380.9 954 32.2
SalBow4G2744 Salvia bowleyana HOM05D005720 ORTHO05D006984 2.6e-103 380.9 959 33.2
arahy.Tifrunner.gnm1.ann1.YA4Y9S Arachis hypogaea HOM05D005720 ORTHO05D006984 3.4e-103 380.6 1024 31.4
CsaV3_4G002370 Cucumis sativus L. HOM05D005720 ORTHO05D006984 7.5e-103 379.4 984 31.8
C02p19150 Brassica napus HOM05D005720 ORTHO05D006984 9.8e-103 379.0 944 32.5
FAN01G1865 Fragaria x ananassa HOM05D005720 ORTHO05D006984 9.8e-103 379.0 977 32.0
BraA02t06213Z Brassica rapa HOM05D005720 ORTHO05D006984 2.2e-102 377.9 951 32.1
EL10Ac3g05366 Beta vulgaris HOM05D005720 ORTHO05D006984 3.7e-102 377.1 953 31.7
MELO3C017804.2 Cucumis melo HOM05D005720 ORTHO05D006984 6.3e-102 376.3 975 31.6
ATR1131G019 Amborella trichopoda HOM05D005720 ORTHO05D006984 8.3e-102 375.9 953 31.7
arahy.Tifrunner.gnm1.ann1.35A5BC Arachis hypogaea HOM05D005720 ORTHO05D006984 4.1e-101 373.6 1025 31.9
C09p42670 Brassica napus HOM05D005720 ORTHO05D006984 5.4e-101 373.2 943 32.2
BolC9t57143H Brassica oleracea HOM05D005720 ORTHO05D006984 5.4e-101 373.2 943 32.2
Ca_27881_v3 Cicer arietinum L. HOM05D005720 ORTHO05D006984 1.6e-100 371.7 962 32.7
Eucgr.K00315 Eucalyptus grandis HOM05D005720 ORTHO05D006984 1.6e-100 371.7 977 32.3
Sp6g15110 Schrenkiella parvula HOM05D005720 ORTHO05D006984 2.7e-100 370.9 940 32.6
HanXRQChr01g0031161 Helianthus annuus HOM05D005720 ORTHO05D006984 1.7e-99 368.2 963 33.1
Hund11695 Selenicereus undatus HOM05D005720 ORTHO05D006984 5.0e-99 366.7 957 32.7
DCAR_010640 Daucus carota HOM05D005720 ORTHO05D006984 6.6e-99 366.3 928 31.0
TAR636G3648 Trochodendron aralioides HOM05D005720 ORTHO05D006984 8.6e-99 365.9 753 36.0
Solyc03g007550.4 Solanum lycopersicum HOM05D005720 ORTHO05D006984 5.5e-98 363.2 940 31.0
Peaxi162Scf00904g00464 Petunia axillaris HOM05D005720 ORTHO05D006984 8.0e-97 359.4 962 31.7
Sopen03g003510 Solanum pennellii HOM05D005720 ORTHO05D006984 1.0e-96 359.0 941 30.9
Lsat_1_v5_gn_1_45000 Lactuca sativa HOM05D005720 ORTHO05D006984 1.4e-96 358.6 952 33.3
Cpa.g.sc3.32 Carica papaya HOM05D005720 ORTHO05D006984 4.0e-96 357.1 982 30.2
Sc13g0009450 Simmondsia chinensis HOM05D005720 ORTHO05D006984 6.8e-96 356.3 957 31.3
MSTRG.27056 Avicennia marina HOM05D005720 ORTHO05D006984 8.9e-96 355.9 976 33.1
Haze_00092 Corylus avellana HOM05D005720 ORTHO05D006984 2.0e-95 354.8 988 31.3
HanXRQChr11g0353671 Helianthus annuus HOM05D005720 ORTHO05D006984 3.4e-95 354.0 955 32.0
Nitab4.5_0000472g0110 Nicotiana tabacum HOM05D005720 ORTHO05D006984 3.4e-95 354.0 961 31.5
TPR.G16464 Trifolium pratense HOM05D005720 ORTHO05D006984 5.7e-95 353.2 956 31.5
Migut.F00255 Erythranthe guttata HOM05D005720 ORTHO05D006984 8.3e-94 349.4 943 33.0
Medtr8g058270 Medicago truncatula HOM05D005720 ORTHO05D006984 1.6e-92 345.1 953 31.9
ECA248G2416 Erigeron canadensis HOM05D005720 ORTHO05D006984 2.0e-92 344.7 946 32.1
CAN.G108.10 Capsicum annuum HOM05D005720 ORTHO05D006984 5.9e-92 343.2 949 31.4
RcHm_v2.0_Chr1g0379731 Rosa chinensis HOM05D005720 ORTHO05D006984 1.6e-89 335.1 854 31.6
Glyma.16G069100 Glycine max HOM05D005720 ORTHO05D006984 6.1e-89 333.2 967 31.7
FAN10G0387 Fragaria x ananassa HOM05D005720 ORTHO05D006984 1.4e-88 332.0 963 31.3
Ah.07g206170 Amaranthus hybridus HOM05D005720 ORTHO05D006984 1.8e-88 331.6 962 28.9
Lalb_Chr06g0161451 Lupinus albus HOM05D005720 ORTHO05D006984 5.2e-88 330.1 974 30.8
AUR62021063 Chenopodium quinoa HOM05D005720 ORTHO05D006984 9.8e-87 325.9 924 31.3
Lj3g0007394 Lotus japonicus HOM05D005720 ORTHO05D006984 2.9e-86 324.3 954 29.8
FAN10G2558 Fragaria x ananassa HOM05D005720 ORTHO05D006984 6.4e-86 323.2 822 31.5
CDE02G2607 Ceratophyllum demersum HOM05D005720 ORTHO05D006984 3.5e-84 317.4 841 29.3
SGA_v2.0_scaffold192G40596 Striga asiatica HOM05D005720 ORTHO05D006984 6.2e-81 306.6 934 29.6
VMungo1127G0215 Vigna mungo HOM05D005720 ORTHO05D006984 5.8e-79 300.1 930 30.2
ClCG07G011830 Citrullus lanatus HOM05D005720 ORTHO05D006984 1.3e-78 298.9 979 28.7
MD01G1213200 Malus domestica HOM05D005720 ORTHO05D006984 1.7e-75 288.5 850 31.1
Hma1.2p1_1891F.1_g306670 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 1.9e-74 285.0 914 29.8
unitig_747.g21855 Utricularia gibba HOM05D000121 ORTHO05D000102 2.5e-74 284.6 993 27.5
SEGI_30168 Sequoiadendron giganteum HOM05D005720 ORTHO05D006984 8.1e-73 279.6 1067 26.2
Psat4g140280 Pisum sativum HOM05D005720 ORTHO05D006984 4.0e-72 277.3 832 30.9
SHI10811 Sapria himalayana HOM05D005720 ORTHO05D006984 5.8e-71 273.5 897 29.1
PGR142G3228 Punica granatum HOM05D005720 ORTHO05D006984 1.7e-70 271.9 949 27.4
Nitab4.5_0001331g0120 Nicotiana tabacum HOM05D005720 ORTHO05D006984 4.6e-68 263.8 939 28.3
Hma1.2p1_0142F.1_g064120 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 1.5e-66 258.8 469 38.4
vmacro06588 Vaccinium macrocarpon HOM05D005720 ORTHO05D006984 2.8e-65 254.6 619 32.1
Phvul.011G167400 Phaseolus vulgaris HOM05D005720 ORTHO05D006984 1.5e-58 232.3 626 32.3
BcaB08g35658 Brassica carinata HOM05D005720 ORTHO05D006984 3.6e-57 227.6 593 30.7
Lj3P914T60 Lonicera japonica HOM05D005720 ORTHO05D006984 5.1e-51 207.2 322 41.3
CSS0019438 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 4.8e-49 200.7 444 35.8
Os01g0222300 Oryza sativa ssp. japonica HOM05D005720 ORTHO05D006984 6.2e-49 200.3 284 42.6
Lj3A914T79 Lonicera japonica HOM05D005720 ORTHO05D006984 1.8e-48 198.7 492 32.1
CSS0038820 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 4.8e-41 174.1 444 31.5
BcaB05g21993 Brassica carinata HOM05D005720 ORTHO05D006984 4.0e-40 171.0 908 24.0
Sed0011275 Sechium edule HOM05D005720 ORTHO05D006984 4.0e-40 171.0 366 33.9
Hma1.2p1_0142F.1_g064140 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 7.6e-39 166.8 395 34.7
BraA10t43127Z Brassica rapa HOM05D005720 ORTHO05D006984 7.1e-37 160.2 306 37.6
Psat0s2250g0040 Pisum sativum HOM05D005720 ORTHO05D006984 1.0e-30 139.8 332 33.7
SEGI_32546 Sequoiadendron giganteum HOM05D005720 ORTHO05D006984 1.7e-30 139.0 999 22.5
MBI16_g03131_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 2.2e-25 122.1 326 32.8
TAR629G3278 Trochodendron aralioides HOM05D005720 ORTHO05D006984 3.7e-25 121.3 212 38.2
vmacro06589 Vaccinium macrocarpon HOM05D005720 ORTHO05D006984 3.8e-22 111.3 270 30.0
PGSC0003DMG400006595 Solanum tuberosum HOM05D005720 ORTHO05D006984 3.4e-15 88.2 217 33.2
MBI16_g03132_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 1.3e-14 86.3 173 38.2
Pp3c15_13500 Physcomitrium patens HOM05D005720 ORTHO05D006984 4.2e-13 81.3 281 28.1
AagrBONN_evm.TU.Sc2ySwM_117.1094 Anthoceros agrestis HOM05D005720 ORTHO05D006984 3.6e-12 78.2 368 27.4
Mapoly0039s0001 Marchantia polymorpha HOM05D005720 ORTHO05D006984 1.0e-11 76.6 250 25.2
Lsat_1_v5_gn_5_90621 Lactuca sativa HOM05D005720 ORTHO05D006984 9.7e-10 70.1 174 36.2
RcHm_v2.0_Chr1g0379741 Rosa chinensis HOM05D005720 ORTHO05D006984 9.7e-10 70.1 66 50.0
SMO367G0167 Selaginella moellendorffii HOM05D000641 ORTHO05D050849 1.7e-09 69.3 211 28.4
SHI10812 Sapria himalayana HOM05D005720 ORTHO05D006984 3.1e-08 65.1 153 33.3
Lju188P3T29 Lonicera japonica HOM05D005720 ORTHO05D006984 2.6e-07 62.0 69 46.4
CBR_g41297 Chara braunii HOM05D005720 ORTHO05D006984 6.5e-06 57.4 172 29.7


User provided reference genes

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