Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 1.7e-166 589.3 313 100.0
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.1e-75 287.7 311 53.7
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 4.4e-74 282.3 310 53.2
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 5.8e-74 282.0 309 52.8
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 1.3e-73 280.8 308 53.2
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 1.3e-73 280.8 312 53.8
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 2.9e-73 279.6 309 56.0
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 3.7e-73 279.3 309 54.4
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 4.9e-73 278.9 309 53.4
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 8.3e-73 278.1 313 52.1
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 8.3e-73 278.1 308 52.9
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 8.3e-73 278.1 310 53.2
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 1.4e-72 277.3 314 53.2
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 3.2e-72 276.2 319 50.8
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 3.2e-72 276.2 313 50.5
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 3.2e-72 276.2 287 54.4
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 4.1e-72 275.8 308 51.0
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 1.2e-71 274.2 309 53.1
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 1.6e-71 273.9 312 50.3
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 1.6e-71 273.9 312 52.2
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 2.1e-71 273.5 309 50.2
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 2.1e-71 273.5 308 52.6
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 2.7e-71 273.1 310 55.5
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 2.7e-71 273.1 309 49.8
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 2.7e-71 273.1 309 52.4
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 3.5e-71 272.7 309 53.1
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 4.6e-71 272.3 312 50.6
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 4.6e-71 272.3 320 50.3
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 4.6e-71 272.3 310 51.6
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 6.0e-71 271.9 317 49.8
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 6.0e-71 271.9 317 49.8
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 1.3e-70 270.8 309 51.5
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 5.1e-70 268.9 309 50.8
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 6.6e-70 268.5 317 48.9
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 8.6e-70 268.1 312 46.2
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 1.5e-69 267.3 314 48.1
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 1.9e-69 266.9 311 48.9
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 2.5e-69 266.5 309 53.1
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 3.3e-69 266.2 313 52.1
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 4.3e-69 265.8 312 50.3
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 5.6e-69 265.4 255 57.3
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 9.5e-69 264.6 312 50.0
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 1.6e-68 263.8 313 49.5
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 2.8e-68 263.1 311 50.2
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 2.8e-68 263.1 311 50.2
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 4.7e-68 262.3 312 49.7
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 4.7e-68 262.3 312 49.7
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 6.2e-68 261.9 316 48.7
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 6.2e-68 261.9 311 50.5
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 6.2e-68 261.9 311 49.2
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 6.2e-68 261.9 309 52.8
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 1.1e-67 261.2 309 49.2
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 3.1e-67 259.6 316 49.7
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 5.2e-67 258.8 319 48.9
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 6.8e-67 258.5 318 48.1
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 6.8e-67 258.5 323 48.9
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 8.9e-67 258.1 315 47.3
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 8.9e-67 258.1 315 47.3
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 1.2e-66 257.7 312 47.4
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 1.2e-66 257.7 315 47.3
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 1.2e-66 257.7 315 47.3
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 1.5e-66 257.3 315 46.7
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 1.5e-66 257.3 309 46.9
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 2.6e-66 256.5 316 48.1
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 5.8e-66 255.4 330 48.2
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 5.8e-66 255.4 310 47.4
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 7.5e-66 255.0 309 46.0
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 1.3e-65 254.2 310 47.4
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 4.9e-65 252.3 313 49.5
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 8.3e-65 251.5 309 52.4
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 4.1e-64 249.2 350 45.1
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 5.4e-64 248.8 311 47.6
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 9.2e-64 248.1 308 51.9
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 7.8e-63 245.0 310 51.0
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 1.0e-62 244.6 310 48.1
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 1.0e-62 244.6 312 46.8
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 2.3e-62 243.4 310 48.7
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 6.6e-62 241.9 311 47.6
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 2.5e-61 240.0 309 46.9
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 3.3e-61 239.6 311 47.9
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 7.3e-61 238.4 310 46.8
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 1.6e-60 237.3 309 50.2
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 4.7e-60 235.7 314 44.9
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 4.7e-60 235.7 310 50.3
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 6.2e-60 235.3 313 44.4
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 6.8e-59 231.9 313 43.5
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 8.9e-59 231.5 293 48.5
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 4.9e-57 225.7 297 45.5
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 1.1e-56 224.6 309 48.5
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 1.6e-55 220.7 268 48.1
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 4.6e-55 219.2 256 47.7
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 1.0e-54 218.0 310 47.7
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 3.3e-53 213.0 310 46.1
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 7.3e-53 211.8 267 43.4
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 8.1e-52 208.4 281 44.5
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 5.3e-51 205.7 310 46.5
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 6.4e-49 198.7 310 45.2
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 6.0e-47 192.2 207 52.2
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.0e-46 189.9 207 52.7
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 5.1e-46 189.1 310 43.5
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 5.6e-45 185.7 280 44.3
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 6.9e-43 178.7 314 42.0
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 3.4e-42 176.4 303 41.3
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 1.7e-41 174.1 273 43.2
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 5.4e-40 169.1 270 41.5
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 1.8e-38 164.1 245 44.9
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 2.3e-38 163.7 142 63.4
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 2.5e-37 160.2 225 45.8
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 3.3e-37 159.8 185 52.4
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 1.2e-34 151.4 266 40.2
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 1.9e-29 134.0 260 36.9
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 2.4e-27 127.1 284 34.5
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 6.9e-27 125.6 110 60.0
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 2.6e-26 123.6 308 34.4
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 3.0e-22 110.2 128 50.0
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 3.3e-21 106.7 191 39.8
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 7.4e-21 105.5 135 48.1
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 1.5e-18 97.8 123 48.0
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 5.9e-18 95.9 134 49.3
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 1.4e-16 91.3 123 42.3
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 1.4e-16 91.3 143 39.2
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 1.6e-15 87.8 104 48.1
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 7.9e-15 85.5 114 48.2
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 7.9e-15 85.5 126 44.4
Lalb_Chr08g0240551 Lupinus albus HOM05D000974 ORTHO05D007456 8.8e-14 82.0 110 43.6
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 4.3e-13 79.7 179 32.4
Pp3c3_31670 Physcomitrium patens HOM05D000974 ORTHO05D007456 7.4e-13 79.0 157 35.7
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.3e-12 78.2 179 31.8
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 4.8e-12 76.3 103 47.6
TAR629G1462 Trochodendron aralioides HOM05D000974 ORTHO05D007456 6.3e-12 75.9 66 53.0
ATR0589G008 Amborella trichopoda HOM05D000974 ORTHO05D007456 4.1e-11 73.2 106 43.4


User provided reference genes

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