Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005176 Vanilla planifolia HOM05D006214 ORTHO05D007723 7.5e-115 417.2 205 100.0
Aqoxy7G01701 Aquilegia oxysepala HOM05D006214 ORTHO05D007723 4.2e-65 251.9 186 68.3
Thecc.09G038200 Theobroma cacao HOM05D006214 ORTHO05D007723 4.2e-65 251.9 189 66.1
Nn8g39214 Nelumbo nucifera HOM05D006214 ORTHO05D007723 2.7e-64 249.2 189 66.1
PGR044G2495 Punica granatum HOM05D006214 ORTHO05D007723 4.6e-64 248.4 190 65.3
COL.COLO4_18710 Corchorus olitorius HOM05D006214 ORTHO05D007723 6.0e-64 248.1 189 64.6
CSS0015630 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 1.8e-63 246.5 188 67.0
CSS0049547 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 1.8e-63 246.5 188 67.0
Dinv30243 Davidia involucrata HOM05D006214 ORTHO05D007723 1.8e-63 246.5 188 66.0
Oeu011261.1 Olea europaea HOM05D006214 ORTHO05D007723 1.8e-63 246.5 188 65.4
Manes.03G064300 Manihot esculenta HOM05D006214 ORTHO05D007723 2.3e-63 246.1 189 65.1
Solyc08g068070.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 3.9e-63 245.4 188 66.0
Hma1.2p1_0003F.1_g003500 Hydrangea macrophylla HOM05D006214 ORTHO05D007723 5.1e-63 245.0 188 64.4
Nitab4.5_0002393g0090 Nicotiana tabacum HOM05D006214 ORTHO05D007723 5.1e-63 245.0 188 66.0
PGSC0003DMG400014492 Solanum tuberosum HOM05D006214 ORTHO05D007723 6.7e-63 244.6 188 66.0
Os06g0591600 Oryza sativa ssp. japonica HOM05D006214 ORTHO05D007723 8.7e-63 244.2 185 65.4
Potri.006G244300 Populus trichocarpa HOM05D006214 ORTHO05D007723 8.7e-63 244.2 189 64.6
Sc06g0000690 Simmondsia chinensis HOM05D006214 ORTHO05D007723 8.7e-63 244.2 188 64.9
TWI34G1412 Tripterygium wilfordii HOM05D006214 ORTHO05D007723 8.7e-63 244.2 188 64.4
THA.LOC104803814 Tarenaya hassleriana HOM05D006214 ORTHO05D007723 1.1e-62 243.8 186 65.6
Nitab4.5_0000250g0190 Nicotiana tabacum HOM05D006214 ORTHO05D007723 1.9e-62 243.0 188 65.4
Cpa.g.sc205.8 Carica papaya HOM05D006214 ORTHO05D007723 2.5e-62 242.7 188 64.9
Gohir.D13G192400 Gossypium hirsutum HOM05D006214 ORTHO05D007723 2.5e-62 242.7 190 63.7
Oeu014655.1 Olea europaea HOM05D006214 ORTHO05D007723 3.3e-62 242.3 188 65.4
Zm00001eb386050 Zea mays HOM05D006214 ORTHO05D007723 4.3e-62 241.9 184 65.2
PSO782G3114 Papaver somniferum HOM05D006214 ORTHO05D007723 5.7e-62 241.5 186 65.6
Hund25645 Selenicereus undatus HOM05D006214 ORTHO05D007723 5.7e-62 241.5 188 64.4
CiPaw.08G022500 Carya illinoinensis HOM05D006214 ORTHO05D007723 7.4e-62 241.1 189 63.5
Gorai.013G218300 Gossypium raimondii HOM05D006214 ORTHO05D007723 7.4e-62 241.1 190 63.2
QL12p026136 Quercus lobata HOM05D006214 ORTHO05D007723 9.6e-62 240.7 199 62.3
Sopen08g021960 Solanum pennellii HOM05D006214 ORTHO05D007723 1.3e-61 240.4 188 64.9
GSVIVG01035713001 Vitis vinifera HOM05D006214 ORTHO05D007723 1.3e-61 240.4 189 63.5
Actinidia13304 Actinidia chinensis HOM05D006214 ORTHO05D007723 1.6e-61 240.0 184 65.8
Lalb_Chr22g0361001 Lupinus albus HOM05D006214 ORTHO05D007723 1.6e-61 240.0 186 63.4
Ciclev10009715m.g Citrus clementina HOM05D006214 ORTHO05D007723 2.1e-61 239.6 181 66.9
CiPaw.07G208400 Carya illinoinensis HOM05D006214 ORTHO05D007723 2.8e-61 239.2 186 64.5
Duzib150G0825 Durio zibethinus HOM05D006214 ORTHO05D007723 2.8e-61 239.2 190 63.2
Rhsim02G0184100 Rhododendron simsii HOM05D006214 ORTHO05D007723 3.7e-61 238.8 185 63.8
PSO063G0005 Papaver somniferum HOM05D006214 ORTHO05D007723 4.8e-61 238.4 186 65.1
Sed0020806 Sechium edule HOM05D006214 ORTHO05D007723 4.8e-61 238.4 188 63.8
Eucgr.C02883 Eucalyptus grandis HOM05D006214 ORTHO05D007723 6.3e-61 238.0 189 64.0
AUR62032401 Chenopodium quinoa HOM05D006214 ORTHO05D007723 8.2e-61 237.7 188 63.3
Medtr1g008700 Medicago truncatula HOM05D006214 ORTHO05D007723 1.1e-60 237.3 190 62.6
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 1.4e-60 236.9 187 63.1
DCAR_001036 Daucus carota HOM05D006214 ORTHO05D007723 1.4e-60 236.9 188 62.8
Manes.16G067000 Manihot esculenta HOM05D006214 ORTHO05D007723 1.8e-60 236.5 189 62.4
Actinidia31216 Actinidia chinensis HOM05D006214 ORTHO05D007723 2.4e-60 236.1 189 63.0
ATR1120G189 Amborella trichopoda HOM05D006214 ORTHO05D007723 4.1e-60 235.3 186 63.4
CANSAT25G2048 Cannabis sativa HOM05D006214 ORTHO05D007723 4.1e-60 235.3 183 63.9
MELO3C011160.2 Cucumis melo HOM05D006214 ORTHO05D007723 5.3e-60 235.0 184 64.1
Lsat_1_v5_gn_6_11341 Lactuca sativa HOM05D006214 ORTHO05D007723 5.3e-60 235.0 194 60.3
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 6.9e-60 234.6 184 63.6
VMungo0647G2273 Vigna mungo HOM05D006214 ORTHO05D007723 9.0e-60 234.2 189 63.0
Thhalv10026389m.g Eutrema salsugineum HOM05D006214 ORTHO05D007723 1.2e-59 233.8 187 63.1
Cc08_g08530 Coffea canephora HOM05D006214 ORTHO05D007723 1.5e-59 233.4 189 62.4
SGA_v2.0_scaffold27G11530 Striga asiatica HOM05D006214 ORTHO05D007723 1.5e-59 233.4 195 62.1
Aa31LG2G16930 Aethionema arabicum HOM05D006214 ORTHO05D007723 2.6e-59 232.6 187 62.6
Sp7g30450 Schrenkiella parvula HOM05D006214 ORTHO05D007723 2.6e-59 232.6 187 62.6
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 3.4e-59 232.3 188 62.8
Migut.A00249 Erythranthe guttata HOM05D006214 ORTHO05D007723 3.4e-59 232.3 188 62.2
Prupe.1G454300 Prunus persica HOM05D006214 ORTHO05D007723 3.4e-59 232.3 197 60.4
SEGI_02532 Sequoiadendron giganteum HOM05D006214 ORTHO05D007723 5.9e-59 231.5 186 62.4
TAR624G0931 Trochodendron aralioides HOM05D006214 ORTHO05D007723 5.9e-59 231.5 189 62.4
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 7.6e-59 231.1 187 61.5
CsaV3_2G031100 Cucumis sativus L. HOM05D006214 ORTHO05D007723 7.6e-59 231.1 184 63.6
HanXRQChr07g0192221 Helianthus annuus HOM05D006214 ORTHO05D007723 7.6e-59 231.1 189 59.3
BolC1t00620H Brassica oleracea HOM05D006214 ORTHO05D007723 1.7e-58 229.9 185 63.2
RcHm_v2.0_Chr6g0305591 Rosa chinensis HOM05D006214 ORTHO05D007723 2.9e-58 229.2 187 62.6
AL7G19050 Arabidopsis lyrata HOM05D006214 ORTHO05D007723 6.5e-58 228.0 186 62.9
Psat6g005800 Pisum sativum HOM05D006214 ORTHO05D007723 6.5e-58 228.0 189 60.3
arahy.Tifrunner.gnm1.ann1.72Y1Y4 Arachis hypogaea HOM05D006214 ORTHO05D007723 1.4e-57 226.9 189 60.8
Lalb_Chr08g0243361 Lupinus albus HOM05D006214 ORTHO05D007723 1.4e-57 226.9 196 60.7
VMungo1309G2769 Vigna mungo HOM05D006214 ORTHO05D007723 1.4e-57 226.9 189 61.4
Carub.0007s0784 Capsella rubella HOM05D006214 ORTHO05D007723 1.9e-57 226.5 186 61.8
Phvul.009G104900 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 3.2e-57 225.7 189 60.3
AT4G32690 Arabidopsis thaliana HOM05D006214 ORTHO05D007723 4.2e-57 225.3 186 61.8
CARHR240670 Cardamine hirsuta HOM05D006214 ORTHO05D007723 4.2e-57 225.3 186 61.8
Haze_21823 Corylus avellana HOM05D006214 ORTHO05D007723 9.3e-57 224.2 186 61.8
TPR.G12079 Trifolium pratense HOM05D006214 ORTHO05D007723 1.2e-56 223.8 189 59.8
Cfa013332 Carpinus fangiana HOM05D006214 ORTHO05D007723 1.6e-56 223.4 186 61.8
arahy.Tifrunner.gnm1.ann1.8TR5WT Arachis hypogaea HOM05D006214 ORTHO05D007723 2.1e-56 223.0 189 59.8
Ca_12821_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 2.1e-56 223.0 189 58.2
Ca_12822_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 2.1e-56 223.0 189 58.2
Peaxi162Scf00105g00059 Petunia axillaris HOM05D006214 ORTHO05D007723 2.1e-56 223.0 188 61.2
Lj1g0018426 Lotus japonicus HOM05D006214 ORTHO05D007723 2.7e-56 222.6 189 58.7
FAN15G3028 Fragaria x ananassa HOM05D006214 ORTHO05D007723 3.6e-56 222.2 183 59.6
Lj1g0018927 Lotus japonicus HOM05D006214 ORTHO05D007723 4.6e-56 221.9 189 59.3
Gohir.D05G051050 Gossypium hirsutum HOM05D006214 ORTHO05D007723 6.1e-56 221.5 192 58.9
Duzib168G0494 Durio zibethinus HOM05D006214 ORTHO05D007723 7.9e-56 221.1 189 58.7
Medtr3g109420 Medicago truncatula HOM05D006214 ORTHO05D007723 7.9e-56 221.1 194 58.8
Glyma.04G079200 Glycine max HOM05D006214 ORTHO05D007723 1.3e-55 220.3 189 59.3
Lj8A606G25 Lonicera japonica HOM05D006214 ORTHO05D007723 1.3e-55 220.3 219 55.3
Psat0s1478g0160 Pisum sativum HOM05D006214 ORTHO05D007723 1.3e-55 220.3 194 59.3
Sopen08g021970 Solanum pennellii HOM05D006214 ORTHO05D007723 1.8e-55 219.9 186 60.8
Phvul.001G060001 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 3.0e-55 219.2 190 59.5
Solyc08g068090.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 5.1e-55 218.4 186 60.2
Glyma.14G140400 Glycine max HOM05D006214 ORTHO05D007723 1.1e-54 217.2 189 58.7
TPR.G1342 Trifolium pratense HOM05D006214 ORTHO05D007723 2.5e-54 216.1 195 57.9
MD15G1099500 Malus domestica HOM05D006214 ORTHO05D007723 5.7e-54 214.9 184 58.7
Eucgr.L03669 Eucalyptus grandis HOM05D006214 ORTHO05D007723 7.4e-54 214.5 189 58.2
Atru.chr7.2182 Acer truncatum HOM05D006214 ORTHO05D007723 1.6e-53 213.4 170 61.8
Atru.chr7.2299 Acer truncatum HOM05D006214 ORTHO05D007723 1.6e-53 213.4 170 61.8
Ca_15627_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 1.6e-53 213.4 192 57.3
Ah.12g061040 Amaranthus hybridus HOM05D006214 ORTHO05D007723 3.1e-52 209.1 188 58.5
ECA233G3302 Erigeron canadensis HOM05D006214 ORTHO05D007723 4.1e-52 208.8 305 40.7
FAN20G2536 Fragaria x ananassa HOM05D006214 ORTHO05D007723 4.1e-52 208.8 183 57.4
FvH4_2g36290 Fragaria vesca HOM05D006214 ORTHO05D007723 9.1e-52 207.6 183 56.8
FAN27G2409 Fragaria x ananassa HOM05D006214 ORTHO05D007723 7.7e-51 204.5 183 56.3
AUR62024819 Chenopodium quinoa HOM05D006214 ORTHO05D007723 6.5e-50 201.4 123 77.2
SMO164G0258 Selaginella moellendorffii HOM05D006214 ORTHO05D007723 9.4e-49 197.6 181 56.9
Gorai.009G052700 Gossypium raimondii HOM05D006214 ORTHO05D007723 2.3e-47 193.0 152 63.8
Pp3c1_3380 Physcomitrium patens HOM05D006214 ORTHO05D007723 1.5e-46 190.3 179 55.9
arahy.Tifrunner.gnm1.ann1.LJ0T63 Arachis hypogaea HOM05D006214 ORTHO05D007723 6.3e-45 184.9 173 56.6
AagrBONN_evm.TU.Sc2ySwM_368.1910 Anthoceros agrestis HOM05D006214 ORTHO05D007723 1.4e-44 183.7 188 54.3
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 1.4e-44 183.7 198 51.5
Sabra06G0191200 Salix brachista HOM05D006214 ORTHO05D007723 6.9e-44 181.4 190 53.2
CAN.G886.7 Capsicum annuum HOM05D006214 ORTHO05D007723 8.5e-42 174.5 165 57.0
Pp3c6_250 Physcomitrium patens HOM05D006214 ORTHO05D007723 1.5e-38 163.7 105 68.6
EL10Ac2g02522 Beta vulgaris HOM05D006214 ORTHO05D007723 2.5e-33 146.4 188 46.3
ClCG08G012410 Citrullus lanatus HOM05D006214 ORTHO05D007723 4.2e-33 145.6 133 59.4
MBI04_g08934_MAGBIO Magnolia biondii HOM05D006214 ORTHO05D003073 1.7e-29 133.7 120 59.2
TAR636G1550 Trochodendron aralioides HOM05D006214 ORTHO05D007723 2.7e-24 116.3 118 53.4
Lsat_1_v5_gn_6_11301 Lactuca sativa HOM05D006214 ORTHO05D007723 8.0e-24 114.8 66 78.8
CSS0007395 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 2.2e-21 106.7 70 67.1
CSS0020447 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 1.2e-19 100.9 115 52.2
Potri.018G036200 Populus trichocarpa HOM05D006214 ORTHO05D007723 1.2e-19 100.9 64 71.9
C01p47490 Brassica napus HOM05D006214 ORTHO05D007723 2.0e-19 100.1 77 59.7
BolC1t04720H Brassica oleracea HOM05D006214 ORTHO05D007723 8.3e-13 78.2 41 78.0
Peaxi162Scf00105g00513 Petunia axillaris HOM05D006214 ORTHO05D007723 8.6e-10 68.2 43 67.4
Glyma.06G080700 Glycine max HOM05D006214 ORTHO05D007723 2.1e-08 63.5 59 50.8
HanXRQChr07g0195131 Helianthus annuus HOM05D006214 ORTHO05D007723 1.0e-07 61.2 46 60.9
arahy.Tifrunner.gnm1.ann1.YGZX15 Arachis hypogaea HOM05D000254 ORTHO05D000165 6.8e-07 58.5 39 66.7


User provided reference genes

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