Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005097 Vanilla planifolia HOM05D007591 ORTHO05D009564 2.1e-56 222.2 120 100.0
Duzib091G0002 Durio zibethinus HOM05D007591 ORTHO05D009564 1.8e-31 139.4 121 66.9
MSTRG.23207 Avicennia marina HOM05D007591 ORTHO05D009564 2.6e-30 135.6 130 65.4
Gohir.A02G020402 Gossypium hirsutum HOM05D007591 ORTHO05D009564 5.7e-30 134.4 120 63.3
Gohir.D02G024000 Gossypium hirsutum HOM05D007591 ORTHO05D009564 9.7e-30 133.7 120 62.5
Gorai.005G030000 Gossypium raimondii HOM05D007591 ORTHO05D009564 9.7e-30 133.7 120 62.5
TAR622G1019 Trochodendron aralioides HOM05D007591 ORTHO05D009564 1.1e-28 130.2 124 62.9
Aa31LG6G9200 Aethionema arabicum HOM05D007591 ORTHO05D009564 1.8e-28 129.4 124 58.9
Nn3g18513 Nelumbo nucifera HOM05D007591 ORTHO05D009564 1.2e-27 126.7 120 61.7
Zm00001eb429080 Zea mays HOM05D007591 ORTHO05D009564 2.0e-27 125.9 128 60.9
PGR083G0752 Punica granatum HOM05D007591 ORTHO05D009564 4.5e-27 124.8 126 61.9
Migut.O00251 Erythranthe guttata HOM05D007591 ORTHO05D009564 1.0e-26 123.6 125 64.0
SalBow5G5001 Salvia bowleyana HOM05D007591 ORTHO05D009564 2.2e-26 122.5 122 63.1
Thecc.04G198100 Theobroma cacao HOM05D007591 ORTHO05D009564 8.5e-26 120.6 120 63.3
MBI06_g28831_MAGBIO Magnolia biondii HOM05D007591 ORTHO05D009564 1.9e-25 119.4 122 60.7
CAN.G1909.5 Capsicum annuum HOM05D007591 ORTHO05D009564 2.5e-25 119.0 125 60.8
Haze_18422 Corylus avellana HOM05D007591 ORTHO05D009564 1.2e-24 116.7 137 56.9
Sc10g0009060 Simmondsia chinensis HOM05D007591 ORTHO05D009564 1.6e-24 116.3 117 60.7
Carub.0001s3401 Capsella rubella HOM05D007591 ORTHO05D009564 2.7e-24 115.5 120 55.8
Oeu001600.1 Olea europaea HOM05D007591 ORTHO05D009564 3.6e-24 115.2 121 57.9
Cc04_g08740 Coffea canephora HOM05D007591 ORTHO05D009564 4.7e-24 114.8 122 59.8
Nitab4.5_0001180g0270 Nicotiana tabacum HOM05D007591 ORTHO05D009564 6.1e-24 114.4 125 56.0
Actinidia35144 Actinidia chinensis HOM05D007591 ORTHO05D009564 8.0e-24 114.0 131 52.7
Thhalv10011878m.g Eutrema salsugineum HOM05D007591 ORTHO05D009564 8.0e-24 114.0 120 60.0
PSO063G6315 Papaver somniferum HOM05D007591 ORTHO05D009564 1.4e-23 113.2 134 51.5
Potri.004G068400 Populus trichocarpa HOM05D007591 ORTHO05D009564 1.4e-23 113.2 122 58.2
CiPaw.16G070000 Carya illinoinensis HOM05D007591 ORTHO05D009564 1.8e-23 112.8 135 53.3
CsaV3_1G005150 Cucumis sativus L. HOM05D007591 ORTHO05D009564 1.8e-23 112.8 121 57.9
Peaxi162Scf00171g00034 Petunia axillaris HOM05D007591 ORTHO05D009564 1.8e-23 112.8 130 57.7
DCAR_014000 Daucus carota HOM05D007591 ORTHO05D009564 3.0e-23 112.1 124 60.5
CSS0020209 Camellia sinensis var. sinensis HOM05D007591 ORTHO05D009564 4.0e-23 111.7 134 53.7
SpUn0008_0030 Schrenkiella parvula HOM05D007591 ORTHO05D009564 4.0e-23 111.7 120 57.5
unitig_22.g5435 Utricularia gibba HOM05D007591 ORTHO05D009564 4.0e-23 111.7 112 64.3
COL.COLO4_20200 Corchorus olitorius HOM05D007591 ORTHO05D009564 5.2e-23 111.3 120 60.8
Nitab4.5_0004612g0010 Nicotiana tabacum HOM05D007591 ORTHO05D009564 5.2e-23 111.3 124 54.8
CARHR134910 Cardamine hirsuta HOM05D007591 ORTHO05D009564 8.8e-23 110.5 123 56.9
Sed0023620 Sechium edule HOM05D007591 ORTHO05D009564 8.8e-23 110.5 129 55.0
MELO3C001953.2 Cucumis melo HOM05D007591 ORTHO05D009564 1.2e-22 110.2 121 57.0
QL07p035218 Quercus lobata HOM05D007591 ORTHO05D009564 1.2e-22 110.2 127 54.3
Sopen03g029150 Solanum pennellii HOM05D007591 ORTHO05D009564 1.5e-22 109.8 122 54.9
THA.LOC104817210 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 1.5e-22 109.8 129 55.0
FvH4_5g18200 Fragaria vesca HOM05D007591 ORTHO05D009564 2.0e-22 109.4 136 55.9
Solyc03g098410.1 Solanum lycopersicum HOM05D007591 ORTHO05D009564 2.0e-22 109.4 122 54.9
Eucgr.H00568 Eucalyptus grandis HOM05D007591 ORTHO05D009564 3.3e-22 108.6 140 54.3
PGSC0003DMG400010159 Solanum tuberosum HOM05D007591 ORTHO05D009564 3.3e-22 108.6 122 54.1
ATR0807G077 Amborella trichopoda HOM05D007591 ORTHO05D009564 4.4e-22 108.2 130 54.6
Aqoxy3G04178 Aquilegia oxysepala HOM05D007591 ORTHO05D009564 4.4e-22 108.2 128 57.0
HanXRQChr17g0560331 Helianthus annuus HOM05D007591 ORTHO05D009564 4.4e-22 108.2 129 52.7
Ah.09g232230 Amaranthus hybridus HOM05D007591 ORTHO05D009564 5.7e-22 107.8 119 59.7
Cpa.g.sc36.38 Carica papaya HOM05D007591 ORTHO05D009564 5.7e-22 107.8 122 54.1
Psat0s3092g0040 Pisum sativum HOM05D007591 ORTHO05D009564 5.7e-22 107.8 127 55.1
AL4G17330 Arabidopsis lyrata HOM05D007591 ORTHO05D009564 7.5e-22 107.5 122 55.7
Atru.chr9.1591 Acer truncatum HOM05D007591 ORTHO05D009564 9.7e-22 107.1 124 53.2
Ca_25920_v3 Cicer arietinum L. HOM05D007591 ORTHO05D009564 1.3e-21 106.7 123 54.5
Prupe.5G241900 Prunus persica HOM05D007591 ORTHO05D009564 1.3e-21 106.7 131 55.7
EL10Ac8g19512 Beta vulgaris HOM05D007591 ORTHO05D009564 2.8e-21 105.5 122 59.8
A04p11310 Brassica napus HOM05D007591 ORTHO05D009564 3.7e-21 105.1 125 54.4
BraA04t16792Z Brassica rapa HOM05D007591 ORTHO05D009564 3.7e-21 105.1 125 54.4
FAN04G1638 Fragaria x ananassa HOM05D007591 ORTHO05D009564 3.7e-21 105.1 122 59.0
C04p45070 Brassica napus HOM05D007591 ORTHO05D009564 4.8e-21 104.8 128 53.9
BolC4t26085H Brassica oleracea HOM05D007591 ORTHO05D009564 4.8e-21 104.8 128 53.9
BcaB06g27212 Brassica carinata HOM05D007591 ORTHO05D009564 6.3e-21 104.4 124 57.3
Sabra04G0046100 Salix brachista HOM05D007591 ORTHO05D009564 6.3e-21 104.4 118 53.4
Dinv01404 Davidia involucrata HOM05D007591 ORTHO05D009564 8.3e-21 104.0 128 50.8
SHI12607 Sapria himalayana HOM05D007591 ORTHO05D009564 8.3e-21 104.0 121 52.9
Medtr6g036570 Medicago truncatula HOM05D007591 ORTHO05D009564 1.1e-20 103.6 127 55.1
ClCG04G012550 Citrullus lanatus HOM05D007591 ORTHO05D009564 1.8e-20 102.8 119 54.6
Hma1.2p1_1404F.1_g281340 Hydrangea macrophylla HOM05D007591 ORTHO05D009564 1.8e-20 102.8 136 52.2
TWI15G0768 Tripterygium wilfordii HOM05D007591 ORTHO05D009564 1.8e-20 102.8 131 50.4
Ciclev10022902m.g Citrus clementina HOM05D007591 ORTHO05D009564 2.4e-20 102.4 124 54.8
AT2G25720 Arabidopsis thaliana HOM05D007591 ORTHO05D009564 3.1e-20 102.1 126 53.2
CDE07G1474 Ceratophyllum demersum HOM05D007591 ORTHO05D009564 3.1e-20 102.1 104 58.7
FAN13G0294 Fragaria x ananassa HOM05D007591 ORTHO05D009564 5.3e-20 101.3 124 55.6
Glyma.08G057500 Glycine max HOM05D007591 ORTHO05D009564 7.0e-20 100.9 138 52.2
ECA234G2981 Erigeron canadensis HOM05D007591 ORTHO05D009564 9.1e-20 100.5 130 53.1
Lalb_Chr05g0221361 Lupinus albus HOM05D007591 ORTHO05D009564 9.1e-20 100.5 127 52.8
arahy.Tifrunner.gnm1.ann1.T0CPW9 Arachis hypogaea HOM05D007591 ORTHO05D009564 2.0e-19 99.4 121 54.5
MD14G1244400 Malus domestica HOM05D007591 ORTHO05D009564 2.0e-19 99.4 132 52.3
RcHm_v2.0_Chr7g0177391 Rosa chinensis HOM05D007591 ORTHO05D009564 2.0e-19 99.4 136 52.9
LjContig00484g0016765 Lotus japonicus HOM05D007591 ORTHO05D009564 2.7e-19 99.0 128 49.2
Manes.02G219300 Manihot esculenta HOM05D007591 ORTHO05D009564 4.5e-19 98.2 123 52.8
FAN18G3921 Fragaria x ananassa HOM05D007591 ORTHO05D009564 1.0e-18 97.1 133 51.1
Lsat_1_v5_gn_4_52441 Lactuca sativa HOM05D007591 ORTHO05D009564 3.2e-17 92.0 134 48.5
AUR62033202 Chenopodium quinoa HOM05D007591 ORTHO05D009564 4.2e-17 91.7 116 48.3
Phvul.002G333300 Phaseolus vulgaris HOM05D007591 ORTHO05D009564 5.5e-17 91.3 136 49.3
AUR62008565 Chenopodium quinoa HOM05D007591 ORTHO05D009564 9.4e-17 90.5 116 47.4
arahy.Tifrunner.gnm1.ann1.B1XHC0 Arachis hypogaea HOM05D007591 ORTHO05D009564 2.1e-16 89.4 123 50.4
Pp3c23_22030 Physcomitrium patens HOM05D007591 ORTHO05D009564 2.1e-16 89.4 120 48.3
Rhsim12G0136500 Rhododendron simsii HOM05D007591 ORTHO05D009564 6.1e-16 87.8 130 46.9
SEGI_35599 Sequoiadendron giganteum HOM05D007591 ORTHO05D009564 1.4e-15 86.7 121 50.4
Os04g0566000 Oryza sativa ssp. japonica HOM05D007591 ORTHO05D009564 2.0e-14 82.8 48 83.3
SpUn0123_0020 Schrenkiella parvula HOM05D007591 ORTHO05D009564 3.7e-13 78.6 71 59.2
Mapoly0020s0124 Marchantia polymorpha HOM05D007591 ORTHO05D009564 7.0e-12 74.3 137 42.3
THA.LOC104813140 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 3.5e-11 72.0 119 44.5
Atru.chr5.956 Acer truncatum HOM05D007591 ORTHO05D009564 4.5e-11 71.6 65 58.5
CAN.G1909.8 Capsicum annuum HOM05D007591 ORTHO05D009564 7.7e-11 70.9 73 53.4
Medtr6g036573 Medicago truncatula HOM05D007591 ORTHO05D009564 1.9e-09 66.2 46 65.2
CBR_g12703 Chara braunii HOM05D007591 ORTHO05D009564 8.0e-08 60.8 126 40.5


User provided reference genes

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